Silkworm Genome Informatics Database

Gene

KWMTBOMO02754

Pre Gene Modal

BGIBMGA003485

Annotation

PREDICTED:_uncharacterized_protein_LOC106709059_[Papilio_machaon]

Location

Bomo_Chr5(+):10123567-10148208 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.666

CDS

ATGGCGGCAGAAATAGCCGTCGAGGATTTTGTCACCATTGTCCCGGTCGGTGAAGGTCGGCCATCTCCGAAAGATCCATCATTCGTTACCGTACTCACTGTGGGTGCTACGACTGGCGCTTCGGAGGTCATTGTACGGAGGCCACGTGGAGAAAGACTTGGCCTCGGACTCAAATTTGAAGGTGGATCAGCCGCTGCAGAAAAAGTTAGAAGACTCTTGGTGCAATCATGTGCAGAAGATAGTCCAGCAGCAAATGCTCAGGCACCCTGGGGAAAATTGATTCCGGGCGATGAAATCTTAGCTATCGACGGCGTTCCCGTTTCAGAACTAACTAGAATTGATTGTGTGCGACGCCTAAAAGATTCAGATGAAACATTAACATTATTAGTGCGTCATTTCGAAATGAACGACAAAGAAGAAAATAGTGTTACGACGAAATCTAAAACGACATCGAAACAATCAACTGATATTATTCGACCAACGACTTTACCACCGCCAGTGCCTCCAAGAAAGTTAGGGAAAAAGAATTCCTTTAAAGATAAGCTCATAACTTTTGGAGAACAGAATTGTAGTGGCAATGTGAACCCACCAAATTTTAATACAAACGATAAGGATATTATGAACGGAAAGCACAACGGAATTTCTACTATTACTAAGTTATCTCGTAAGTCGTCTTTTGATAGTCATATTCATCGTCAAAACAAAGAAAGCTTGGCTTGTTTTAAAAAAGGTTCACCAGAAGAAGTAAGACGACTAGTACGTAGATTGTCAGACGGTAAAGCAGTGCCCCCTGATGCCGAAGTATATTTAGATTTATTGTCATCAACCGATTGGGAACGCTGCTTAGTATTGGCTGATGCAGAGTCTGATGACACAGGCAGCTCCATTTCAACAGTAGTAGACAGACTTGGGTCGATGGCGAGCTCGGTCGAAAATAGTATTCCTTCTACACCGATAATGCAACCAAAAACTATTGATATCCAAAAAGTGTTGAATTGTATTGAAAATATTGATACTAATATTCTTAAAGATATCACAAGTAAACAATTTATGGAGAAACAATATGAAAAACGAGAAGAGTCAAACAATGTAGACAAGGTGACTCATGGCAACAATACAAACGTTTCAACGTCAATGTCTAGCGAGGAAAATAAACAAACAGCGACAAAACGATTTTTTGGCAGTGACAAAAATAACAATAGTACAAACCTTGCAACTAAACATGAGAATATCGACACAAATCATTTAAAAAATAACGAAAATTCCGATCAGATTATAGAAAAACCCAAACCCATGCCACGGAACACGAAAATAGAGAGATCGGTTAGTGAAAGAAGACCCAAACGTATTCCGGTGCCAGACGTTTCGCCACCACCCATGCCCGAATCATTACTGACACCAACAAAAAAGAATTGTATCGAAACGTGGTTGCAGCGCTCTGAAGCTGAAATGAATAACACAAACGCAGAAAAAATTCAAGATACTACGACACAAGAGGTGCTACCGCGACTAATTGATTTCGTGCCTAAGTCTCAATTTAAAGAGAGCAGCAATGATTCGCCAACTTTAACGCGACCCACTACAGCGCCGCCGCCGCCGCCGACTGAAACACGAGAAGACGGCTCTGGAGCATCACTTGACACTATCGGAGAATTAGACGAATCAACCGACGTCACGGACAGCATCAAACCAATAGTCGTCCTGGAGACAAAAGAGCGAAAATCGTCGTTTGAAAGAACCTTTTGGGAAGGTTTCTTATACAGGGAGCAAAGAGAAGAATTCGCAAAGTCGAAACTTTTTTGGCTACTAATAGTTCCTTTCTTACCGGACTTTTAG

Protein

MAAEIAVEDFVTIVPVGEGRPSPKDPSFVTVLTVGATTGASEVIVRRPRGERLGLGLKFEGGSAAAEKVRRLLVQSCAEDSPAANAQAPWGKLIPGDEILAIDGVPVSELTRIDCVRRLKDSDETLTLLVRHFEMNDKEENSVTTKSKTTSKQSTDIIRPTTLPPPVPPRKLGKKNSFKDKLITFGEQNCSGNVNPPNFNTNDKDIMNGKHNGISTITKLSRKSSFDSHIHRQNKESLACFKKGSPEEVRRLVRRLSDGKAVPPDAEVYLDLLSSTDWERCLVLADAESDDTGSSISTVVDRLGSMASSVENSIPSTPIMQPKTIDIQKVLNCIENIDTNILKDITSKQFMEKQYEKREESNNVDKVTHGNNTNVSTSMSSEENKQTATKRFFGSDKNNNSTNLATKHENIDTNHLKNNENSDQIIEKPKPMPRNTKIERSVSERRPKRIPVPDVSPPPMPESLLTPTKKNCIETWLQRSEAEMNNTNAEKIQDTTTQEVLPRLIDFVPKSQFKESSNDSPTLTRPTTAPPPPPTETREDGSGASLDTIGELDESTDVTDSIKPIVVLETKERKSSFERTFWEGFLYREQREEFAKSKLFWLLIVPFLPDF

Uniprot

H9J1U8 A0A2A4K1I7 A0A0L7LQS7 A0A2H1W6P3 A0A212FIX5 A0A194PQ58 + More
A0A194RG23

Pubmed

19121390 26227816 22118469 26354079

EMBL

BABH01007976 NWSH01000300 PCG77623.1 JTDY01000311 KOB77754.1 ODYU01006685 + More
SOQ48751.1 AGBW02008321 OWR53670.1 KQ459597 KPI94874.1 KQ460207 KPJ16763.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000007151 UP000053268 UP000053240 + More

PRIDE

H9J1U8

Pfam

PF00595 PDZ

Interpro

IPR036034 PDZ_sf + More
IPR001478 PDZ

SUPFAM

SSF50156 SSF50156

ProteinModelPortal

H9J1U8 A0A2A4K1I7 A0A0L7LQS7 A0A2H1W6P3 A0A212FIX5 A0A194PQ58 + More
A0A194RG23

KEGG

101744953 no KO assigned | (RefSeq) dentin sialophosphoprotein

GO

GO:0005515 GO:0016020 GO:0005230 GO:0006810 GO:0016021 GO:0004889 GO:0005216 GO:0045211 GO:0006281 GO:0048384

Length:

611

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02275

Exp number, first 60 AAs:

0.02275

Total prob of N-in:

0.00142

outside

1 - 611

Pi

244.822004

Theta

186.72699

Tajima's D

0.754683

CLR

0.169006

CSRT

0.595420228988551

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics