Silkworm Genome Informatics Database

Gene

KWMTBOMO02739

Annotation

PREDICTED:_uncharacterized_protein_LOC106709008_[Papilio_machaon]

Location

Bomo_Chr5(+):9933817-9936424 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.37

CDS

ATGGAATCGAGCACATTATTAGCCAATACTATGGAGATCCCATCAAATTATGAGAAATCTACGCAGCCTGCGATATTTATTGATATTAGTTTGTGTAAAAATGAAGAAAGCGGGTATCATACTTTAACACCAGGATCAATCGAAGCCTCCAATTTGTCGAGTGACTACTTTGAACAATCTATTCTCGCTAATAACAAACGTATTACTGGCCAGATTCGTTATATTACACCAGAGACGAATCAGTGTAATAGACCATCAGTTATACTTAATGATATAACAGGAACACCATTGCCAAGGCGCGGCTTGAAACGATCATATCAAGACATAGAAACGTTGGAGTTACCATATAGTCCCATACCTACTCCTACTAGTTTGATTGCTGGACAAATCAGAAATCTCTATGTTAATGAAAACAAAGAAAACTCATCCCGCTCGTTAAATGCTATAAATATAGACAGAGCAAACAATCTTACAAAACATCTTTTACAAGGTCATGAATCAGCATCATATCCAATAACACCAGTTAAAAGAAATTGCAAGACAAATCCTTGTAGGAAATCGGCCAAAAAACTCAATTTTGTAACACATTCGCTATCATGTGAAATGCGTGAATTACAACAAGTGAACAGGCCGAGAGCACTAGTAGAAGCAGTAAAAACTGTACTATTCAAACCTAACAATGATATAATTCAAAGGCTATATGAAGGCAATGTAATACCACCAATTGCAACTATTTTGAATTACTTGTCGAATGAAGATATTAATAACTTCATTTTAGTAAGTGCAACTTGGGCTGAGGTTTGGACATCAGTAAGTGATAGTGAACGAAAAGTAGCATATGAACAGTATTTAAAAAACGCAAAGGAAAACCAAGAAAATGGTCAAAAAATTGTACATAAAAATATAGAAAGGAAAAATACATTTTCAGCTAAGATTGGTTGTTTGAGAGAAATTCACAATGAATTAAACAATAGTAAAATAGTGCCCACTCCTAGAAGTCCTCCAGGAACTCCAAAATCAAACAGATTCAAGAAATTTACAAAGTCAGCATCACTAGATACACGCATGCAGCTTTCTTGTGTAAGGTGTTCATTACCTGCAAAAGTAACAGTTGAAACTTCAGGCGAGGAATGGGTAGAATGTATCAATGTGTTATGTGCTTACCAGTTCTGTAGGTTTTGTCAATGTGAAAGGCATCCTGATAAAGTATGCTTTCAGTATGACCTCAATGGACCTAGTCCTTCAAAAAGGAAGAAAACTCATTATGCAATAGGTACCAAGAAAAGCAGGAAAAACCTGCGAAGACTCCTATGA

Protein

MESSTLLANTMEIPSNYEKSTQPAIFIDISLCKNEESGYHTLTPGSIEASNLSSDYFEQSILANNKRITGQIRYITPETNQCNRPSVILNDITGTPLPRRGLKRSYQDIETLELPYSPIPTPTSLIAGQIRNLYVNENKENSSRSLNAINIDRANNLTKHLLQGHESASYPITPVKRNCKTNPCRKSAKKLNFVTHSLSCEMRELQQVNRPRALVEAVKTVLFKPNNDIIQRLYEGNVIPPIATILNYLSNEDINNFILVSATWAEVWTSVSDSERKVAYEQYLKNAKENQENGQKIVHKNIERKNTFSAKIGCLREIHNELNNSKIVPTPRSPPGTPKSNRFKKFTKSASLDTRMQLSCVRCSLPAKVTVETSGEEWVECINVLCAYQFCRFCQCERHPDKVCFQYDLNGPSPSKRKKTHYAIGTKKSRKNLRRLL

Uniprot

A0A2A4K036 A0A2H1WW31 A0A194RH32 A0A194PUP9 A0A0L7LV44 A0A1E1VXT0 + More
A0A212FIW3 F7BG76

Pubmed

26354079 26227816 22118469 19892987

EMBL

NWSH01000357 PCG77030.1 ODYU01011505 SOQ57279.1 KQ460207 KPJ16749.1 + More
KQ459597 KPI94860.1 JTDY01000022 KOB79378.1 GDQN01011516 JAT79538.1 AGBW02008321 OWR53683.1

Proteomes

UP000218220 UP000053240 UP000053268 UP000037510 UP000007151 UP000002281 + More

Pfam

PF00646 F-box

Interpro

IPR001810   F-box_dom        + More
IPR036047   F-box-like_dom_sf
IPR002867   IBR_dom

SUPFAM

SSF81383 SSF81383

ProteinModelPortal

A0A2A4K036 A0A2H1WW31 A0A194RH32 A0A194PUP9 A0A0L7LV44 A0A1E1VXT0 + More
A0A212FIW3 F7BG76

PDB

4UI9 E-value=4.80777e-08, Score=138

KEGG

101746725 K10292 F-box protein 5 | (RefSeq) uncharacterized LOC101746725

GO

GO:0010997 GO:0001556 GO:2000773 GO:1905322 GO:1990948 GO:0045835 GO:0045669 GO:0045841 GO:0032876 GO:0072687 GO:2001021 GO:0007057 GO:0005634 GO:0046785 GO:0010971 GO:0005737 GO:0019901 GO:0008284 GO:0005654 GO:0016050 GO:0070169

Length:

437

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00183

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00516

outside

1 - 437

Pi

206.109694

Theta

170.497607

Tajima's D

0.56482

CLR

0.363511

CSRT

0.536173191340433

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics