Gene

KWMTBOMO02731  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA003473

Annotation

PREDICTED:_trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]

Location

Bomo_Chr5(+):9718491-9735934      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.279 Nuclear   Reliability : 1.537 PlasmaMembrane   Reliability : 1.018

CDS

ATGGCTAGAACTGGAAAAACAGCCCAAGAATTTATTCAGAGTTCGTTTTCGCCTATAGTTGCAGTACTATGCAGTCAAAAGGTTGAAAATATTGTGTCGAAAAATAATGTAACGTTTCCTGAATTATTACAACCATTTTGCAATTTGGATTGGGAAGGTCAGTTCCGTGAACCTGGTGGCAATACTTGTGTCATAAAAAATATGAAGCTAATTGTGAGAGATGTGAACTGGAAACCCCTACAGCCTACTGAGGCTAGAAGACAGCTCAATAATGCTGTTCTTTATAATTACAATGACAAAACTATATCTGTTGAATTAGCTGGTCGAAGTTTTTTAATACCCCAATCAACACATTGGTTTGATGCTTGGAGGGAAACATACCTAGATGTGCAATTTCCATCTGACCATGAATTCACAAAACATTTCCTGTCATGTATTATTGTGGGAACAACTGATGACGAAAATGTTGTGGACACTTTCAATGGCCTGAATCAACAATATGCCCAACTACAGAATGTAATGCCACCAAAATTGCCTAAATGGTTCAACAATTGTATTCTGAAAACATATTTACTACTTCATGATGTATCTGTTGTTTCAAAAGAAAGGGCTGATGCTGTGTTTGACACGTTGAAACATGCTTTTGGACCTAATAGTTGTTTTATGCTTCCCATTAATTCTAAAAGTACGTCAGATGCTAATGTACCTGCAGATTTATGGAGCCAGTATATTAAGAGATCTCCAGATTCCACCAGTGACGTAGCTTCTATCTTCTCGAATTTAGCAACAACGCCAGCAGAACAAGCCCCTATATTTCCATCTCAAAACATTATTGAAAGAGGTGAAGACACATTAACAGGGTCAGTACAAGAGAGTGTGCACCCACTGACAAGCCCAGAAACAGATGTTTATGACAATGCCAACAGTTTGCAGACCCATTCGTTTTCTGGCAGTGTAGAGAGTGTTAGCGTCAGCGCAAAAGGAATTGATTTGTCTACTGAAGTTCATGGGGCTGCTTTAAACAACAACGATATAGAGGCCATCAAAAAATTCCTTCAAGAATATGCATCAAAAGCCTTGCTGCCGTACATAGAAAAGCAAATCTCCCAGCTATCTGAATCAGTAGCCAACAGAAAAGGAGTAAGTAGATCGCTTCTCTCTGCTACAAAAAGATGGTTCGGCACTGGTAAAGGTGGAAATGCTACCGGAAATAGTGCAGTTGTATACACAAATGACTGTCCCGAACTACAGTTACGACGTTTGGGCGATCTTTGGTTTTTGTGCGGGCAATGGCAGCGGGCTTTCGATACCTACCACACTGCCAAAAGAGAGTTCTATGCGGACAGCGCGTGGCTCTGTTACGCGGGTGCGCTCGAAATGGCCGCAATAAGTGCTTTTATGGCTGGTGATTCCAATCGTAAAACTCATGGATATTTAGAAGAAAGCATCGTTACATATCTTAATACTTGCAGAATGGTACAGTATGCTGTTCGAGCGACGTTGCTGTCGGTGATTTGTTTGACTAGCAGCGGACTTCACGGTGAAGCCGCTAAACAATTGATACGCATGACATCAGAGGACAGCGACCTTCGTAGTGCTATGCTTTTGGAACAAGCTGCACTTTGTTTCCTGTCGGGACCAGGCACGAAAGCCATGTGTAGAAAATACGCTTTTCATATGGTTTTGGCTGGGCACAGGTTTTCGAAAGCGGGCCAAAAGAAGCACGCCTATCGATGTTACAAACAAGCTCACCAGGTGTACAGCGGAAGCGGATGGCGGCTAGCGACGGACCATGTCCAGTTCGCGCTGGGCCGGCTCGCGGGCGCGCTGCGTCGGGCGCACGACGCCGTGCAGTGGCTGGCCGCGCCGCTCGCGCCTCACCCCCCGCAACCGCCTGCCCAGCAAGAAGCCTTCTTGAGAGAGTACATGCATGCACATCAGCAATGGCAAGAGAGTAGCGAGGAGCGTCGGAGCAGGCTGGAGAAGTTGCCGCTGCCGGTGGCGGAGGTGAGCATGACGCGCGTGGCGTGCGCAGGCCCGGCGCCGCTGTCGTCGCCGCGGCGCTGCGGCGCGACGTCGCTGTCCGTGCAGGCGCCGCGCCGCGACCCGCACGAGGAGCGCGTCTGGCGCACGCTGGAGGAGATGCTGGTGCAGGTAGCGCGCGGCGCCGTGCCTATGATATTCAAGCCGACACTTGACCTTTACGATGACACCACGGACTGTCATCCGCTCGTGCCCCAAGGAGAACCGATCCAGATATCTGTTACCTTATGGAATCCCTTGAAGATATCACTTATACTGAAAGACGTGGAGTTGCTATGGCGTTTTACACCGCTTAACGAGTCTGGTGACAGCGATGACAATAATAGTATCTACAATGAAATCGCTTTAGCACAAGGAGTGGAAGTAGCAAGTAACGTGATAGTTGGACAAAAACTACCTTCAGTCGTTTTGGAAGGGGATAGTAAAAAATCATTAATATTCTCCTTAACTCCTATGAAAGTTGGACAAGTTTACATTCAAGGATTAGCGTACAAATTAATAAACGCTGGAGAAGGCGCCTCTGAAAACAGTACTGGTGTTTCAATACAAGGGAAAGTAGATTTAATGTCTGGAGTAAAAAGTATGGACAAGCGATTGGAAATTACTGTCATACCAGAAGCGCCGTGTTTGCAGATGACCTTCTCGGAGACTAATCCAGATATAATAAGTGGCGAAATAAGAACTGTAGACGTGGAACTGACCAATGTCGGACCCGTCGACATGAAGAACGTTTTCATCGCGGTCTCGCATCCCGAATGTGTCAGTGTGGTCACGCCGGATAATGTCGTTGATGATTTTAAAATTTTGTACGATGAAAAGTTTCGAGAAATTACACCAAATTCAGAGGAGCGCGGCAGGGGCGCGGAGGCGTGGCGGCGGGCGGCGGCGCGGCACGTGCGGGCGGCGCGCTGCGGGCCGGCCGTGCTGCTGCTGCGCCCGCACTGCGCCGCCGCGCGCCTGCACCTGCTCGCCTACTACGAGACCGGACTCGAGCGCCGCCCCTACAGACTGCTCAGACACGTCTTCCGATTCAATGTAGTGGACGCTGTTGATATCACTATAAACCCGAGACGAAGCCTTAAAACCGTTAACGAAAGCGTTGCCGAGATTGTCAACTTATCTGTGGAAGTATCAAATATTTCCGAAAATAAAAGTGACCAAATAAATATTGAGCTTTTGGAAGCGGCGTTTTTAAGTCGACAATGGAAAATAACAAATCTTATCGCCGCCCGAGACAAGAATGACATTTTGGCGCCCCGCGAAAAACTTCATCTTGTATTTAAGGGTCACAGAATTCTCAAAGCGGTACCCGAGGGACGAATTGAAACTTCTTGTGTTAAAATTTCCGAAGGACATCCGGACTCTATTGCTGATATTACATCGCCGCCATATTCTAAATTTATGATTGACAAAAAATCTTCATTCATCGATTCAGCAGACAACACATTCAACCAAGACATAGAAAAGAGGTCTGGTTTACTCCAGTCTATGTTCGTTCTTCGATGGAAAGCACAAGATGAAACGACAGGGCGATCTGCAGTCGGCCAACATTGTTTATGGTTGGATTGTTTCAACAAGGTGCAATACGGGGAAAAAGTATTAGTTACTGACAACAATCCTCCCTTACCCCTCGATGAAAACGAAAGTAAGCTTGACGTTACTGAAAATAAAAAAAATATTAAAAAAGACAACGTTGTAATGTTCAAGATGGAGCATTCGAAACAGATAAATCACGATTTCAACGAAAGAAGACTTTGTATTATTCCAGTCACATTGAGCATTGTTAACTGTTATGGAGTCCCTGTAAGGGTGTTTATAAACATGAGCAAACAGAAGAACAGGGAAACGTCTGGAAGGGAGCTCGGGTGGACAGGGGCGCTGCACAACGGACCCGACGCGGACTCTAAAGAAATAGGCGTCAGTATTCATCTCGAGAAATTCGAAACGCGCCGCGTTCAAGTGCAGGGCGTCTGCGCGGCTCCCGGCACCTACCTCGTCGGATCGGCATTCACTGTTACGACACAAGGAACAGAACCGCACATGAATGTAACGGATGTCTCGAACAACACGTCCTTATTGGTTTTACAGCAAGCGTAA

Protein

MARTGKTAQEFIQSSFSPIVAVLCSQKVENIVSKNNVTFPELLQPFCNLDWEGQFREPGGNTCVIKNMKLIVRDVNWKPLQPTEARRQLNNAVLYNYNDKTISVELAGRSFLIPQSTHWFDAWRETYLDVQFPSDHEFTKHFLSCIIVGTTDDENVVDTFNGLNQQYAQLQNVMPPKLPKWFNNCILKTYLLLHDVSVVSKERADAVFDTLKHAFGPNSCFMLPINSKSTSDANVPADLWSQYIKRSPDSTSDVASIFSNLATTPAEQAPIFPSQNIIERGEDTLTGSVQESVHPLTSPETDVYDNANSLQTHSFSGSVESVSVSAKGIDLSTEVHGAALNNNDIEAIKKFLQEYASKALLPYIEKQISQLSESVANRKGVSRSLLSATKRWFGTGKGGNATGNSAVVYTNDCPELQLRRLGDLWFLCGQWQRAFDTYHTAKREFYADSAWLCYAGALEMAAISAFMAGDSNRKTHGYLEESIVTYLNTCRMVQYAVRATLLSVICLTSSGLHGEAAKQLIRMTSEDSDLRSAMLLEQAALCFLSGPGTKAMCRKYAFHMVLAGHRFSKAGQKKHAYRCYKQAHQVYSGSGWRLATDHVQFALGRLAGALRRAHDAVQWLAAPLAPHPPQPPAQQEAFLREYMHAHQQWQESSEERRSRLEKLPLPVAEVSMTRVACAGPAPLSSPRRCGATSLSVQAPRRDPHEERVWRTLEEMLVQVARGAVPMIFKPTLDLYDDTTDCHPLVPQGEPIQISVTLWNPLKISLILKDVELLWRFTPLNESGDSDDNNSIYNEIALAQGVEVASNVIVGQKLPSVVLEGDSKKSLIFSLTPMKVGQVYIQGLAYKLINAGEGASENSTGVSIQGKVDLMSGVKSMDKRLEITVIPEAPCLQMTFSETNPDIISGEIRTVDVELTNVGPVDMKNVFIAVSHPECVSVVTPDNVVDDFKILYDEKFREITPNSEERGRGAEAWRRAAARHVRAARCGPAVLLLRPHCAAARLHLLAYYETGLERRPYRLLRHVFRFNVVDAVDITINPRRSLKTVNESVAEIVNLSVEVSNISENKSDQINIELLEAAFLSRQWKITNLIAARDKNDILAPREKLHLVFKGHRILKAVPEGRIETSCVKISEGHPDSIADITSPPYSKFMIDKKSSFIDSADNTFNQDIEKRSGLLQSMFVLRWKAQDETTGRSAVGQHCLWLDCFNKVQYGEKVLVTDNNPPLPLDENESKLDVTENKKNIKKDNVVMFKMEHSKQINHDFNERRLCIIPVTLSIVNCYGVPVRVFINMSKQKNRETSGRELGWTGALHNGPDADSKEIGVSIHLEKFETRRVQVQGVCAAPGTYLVGSAFTVTTQGTEPHMNVTDVSNNTSLLVLQQA

Uniprot

A0A2H1WWV5   A0A194PQ34   A0A194RL77   A0A232EQN5   A0A067RN35   K7J961   + More
A0A310SMQ5   A0A0L7RHF5   A0A154P334   A0A2A3E024   A0A087ZQ54   E2BS50   A0A0N0BHF5   A0A1B6C903   A0A1B6D9P4   A0A0T6B309   A0A151JMP5   A0A0C9RTI7   A0A1Y1LFQ9   N6T8R5   A0A1B6H201   D6W7M6   A0A1B6D8Y9   W8BWF1   A0A182JH40   A0A0A1X3G3   Q16EL6   A0A0N8ES11   A0A240PL03   E9I9P9   A0A0L0C6L6   A0A0K8VLE8   A0A0K8WLT3   A0A084WF13   A0A1Q3F952   A0A336MNX8   A0A182TZQ8   A0A2M4AD91   A0A182Y2E1   A0A1Y9GLW2   A0A182SZH4   A0A1Y9IS66   T1PJW1   Q7QIN4   A0A1Y9J0V1   A0A182K294   A0A2C9GTT1   A0A087ZB78   W5JFR9   A0A1Y9HER4   B4KZB5   A0A1B0AI78   A0A182M5J2   A0A1I8NQR6   A0A182QDI5   B4LD11   A0A1A9V3T9   A0A1Y9H2Z6   A0A1B0B6W0   B4MXL8   A0A1A9Y0X0   A0A0M4EKN1   B4IY28   K1RJY3   A0A1Y9IW85   A0A1B0G8J8   B4PGE2   A0A1W4URQ6   B3M6Z0   E0VH35   B0WX12   A0A2R7VYJ2   A0A069DXY3   A0A1S3HC02   A0A1S3HB40   A0A3B4U3E1   A0A2U9C4R2   A0A3B4U3Y4   A0A2U9C4N7   A0A3P8WT84   A0A3B4DDK0   R7TAE0  

Pubmed

26354079    28648823    24845553    20075255    20798317    28004739    + More
23537049    18362917    19820115    24495485    25830018    17510324    26999592    21282665    26108605    24438588    25244985    25315136    12364791    14747013    17210077    20966253    20920257    17994087    18057021    22992520    17550304    20566863    26334808    24487278    23254933   

EMBL

ODYU01011613    SOQ57467.1    KQ459597    KPI94849.1    KQ460207    KPJ16736.1    + More
NNAY01002732    OXU20674.1    KK852527    KDR22025.1    AAZX01002217    KQ761155    OAD58182.1    KQ414592    KOC70233.1    KQ434809    KZC06243.1    KZ288507    PBC25143.1    GL450151    EFN81442.1    KQ435756    KOX75941.1    GEDC01028390    GEDC01027336    GEDC01005052    JAS08908.1    JAS09962.1    JAS32246.1    GEDC01014894    JAS22404.1    LJIG01016060    KRT81734.1    KQ978919    KYN27518.1    GBYB01010826    JAG80593.1    GEZM01057069    JAV72463.1    APGK01047052    KB741077    KB632384    ENN74088.1    ERL94219.1    GECZ01001119    JAS68650.1    KQ971307    EFA11313.1    GEDC01015167    GEDC01012462    GEDC01004999    JAS22131.1    JAS24836.1    JAS32299.1    GAMC01013036    JAB93519.1    GBXI01008881    JAD05411.1    CH478660    EAT32675.1    GDUN01000762    JAN95157.1    GL761846    EFZ22737.1    JRES01000836    KNC27876.1    GDHF01012615    JAI39699.1    GDHF01000272    JAI52042.1    ATLV01023269    KE525341    KFB48807.1    GFDL01011017    JAV24028.1    UFQT01001876    SSX32072.1    GGFK01005422    MBW38743.1    APCN01003698    KA648248    AFP62877.1    AAAB01008807    EAA04695.4    ADMH02001626    ETN61730.1    CH933809    EDW18941.1    AXCM01003051    AXCN02000557    CH940647    EDW69892.1    KRF84636.1    JXJN01009254    CH963876    EDW76787.1    CP012525    ALC44776.1    CH916366    EDV97571.1    JH816409    EKC34521.1    CCAG010000259    CM000159    EDW95301.1    CH902618    EDV40855.1    DS235157    EEB12691.1    DS232155    EDS36273.1    KK854140    PTY11991.1    GBGD01000139    JAC88750.1    CP026254    AWP11554.1    AWP11555.1    AMQN01014238    KB310824    ELT90674.1   

Proteomes

UP000053268    UP000053240    UP000215335    UP000027135    UP000002358    UP000053825    + More
UP000076502    UP000242457    UP000005203    UP000008237    UP000053105    UP000078492    UP000019118    UP000030742    UP000007266    UP000075880    UP000008820    UP000075885    UP000037069    UP000030765    UP000075902    UP000076408    UP000075840    UP000075901    UP000075903    UP000095301    UP000007062    UP000076407    UP000075881    UP000075882    UP000000673    UP000075900    UP000009192    UP000092445    UP000075883    UP000095300    UP000075886    UP000008792    UP000078200    UP000075884    UP000092460    UP000007798    UP000092443    UP000092553    UP000001070    UP000005408    UP000075920    UP000092444    UP000002282    UP000192221    UP000007801    UP000009046    UP000002320    UP000085678    UP000261420    UP000246464    UP000265120    UP000261440    UP000014760   

Pfam

PF08626   TRAPPC9-Trs120        + More
PF12739   TRAPPC-Trs85
PF00202   Aminotran_3

Interpro

IPR013935   TRAPP_II_complex_Trs120        + More
IPR024420   TRAPP_III_complex_Trs85       
IPR011990   TPR-like_helical_dom_sf       
IPR018247   EF_Hand_1_Ca_BS       
IPR005814   Aminotrans_3       
IPR015422   PyrdxlP-dep_Trfase_dom1       
IPR004631   4NH2But_aminotransferase_euk       
IPR015424   PyrdxlP-dep_Trfase       
IPR015421   PyrdxlP-dep_Trfase_major       

SUPFAM

SSF48452   SSF48452        + More
SSF53383   SSF53383       

Gene 3D

1.25.40.10     3.40.640.10     3.90.1150.10    

CDD

cd00610  OAT_like

ProteinModelPortal

A0A2H1WWV5   A0A194PQ34   A0A194RL77   A0A232EQN5   A0A067RN35   K7J961   + More
A0A310SMQ5   A0A0L7RHF5   A0A154P334   A0A2A3E024   A0A087ZQ54   E2BS50   A0A0N0BHF5   A0A1B6C903   A0A1B6D9P4   A0A0T6B309   A0A151JMP5   A0A0C9RTI7   A0A1Y1LFQ9   N6T8R5   A0A1B6H201   D6W7M6   A0A1B6D8Y9   W8BWF1   A0A182JH40   A0A0A1X3G3   Q16EL6   A0A0N8ES11   A0A240PL03   E9I9P9   A0A0L0C6L6   A0A0K8VLE8   A0A0K8WLT3   A0A084WF13   A0A1Q3F952   A0A336MNX8   A0A182TZQ8   A0A2M4AD91   A0A182Y2E1   A0A1Y9GLW2   A0A182SZH4   A0A1Y9IS66   T1PJW1   Q7QIN4   A0A1Y9J0V1   A0A182K294   A0A2C9GTT1   A0A087ZB78   W5JFR9   A0A1Y9HER4   B4KZB5   A0A1B0AI78   A0A182M5J2   A0A1I8NQR6   A0A182QDI5   B4LD11   A0A1A9V3T9   A0A1Y9H2Z6   A0A1B0B6W0   B4MXL8   A0A1A9Y0X0   A0A0M4EKN1   B4IY28   K1RJY3   A0A1Y9IW85   A0A1B0G8J8   B4PGE2   A0A1W4URQ6   B3M6Z0   E0VH35   B0WX12   A0A2R7VYJ2   A0A069DXY3   A0A1S3HC02   A0A1S3HB40   A0A3B4U3E1   A0A2U9C4R2   A0A3B4U3Y4   A0A2U9C4N7   A0A3P8WT84   A0A3B4DDK0   R7TAE0  

KEGG

101740466    K20305 trafficking protein particle complex subunit 8 | (RefSeq) trafficking protein particle comple

GO

GO:1990072   GO:0000045   GO:0000407   GO:0031410   GO:0034497   GO:0030242   GO:0032258   GO:0006888   GO:0030170   GO:0009448   GO:0003867   GO:0008483   GO:0005515   GO:0006355   GO:0003700   GO:0005634   GO:0005667   GO:0005737   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

PANTHER

PTHR12975  

Length:

1379

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

7.90687

Exp number, first 60 AAs:

0.00219

Total prob of N-in:

0.00924

outside

1  -  1379

 

 

Pi

230.322145

Theta

164.908384

Tajima's D

1.157432

CLR

0.350701

CSRT

0.705364731763412

Interpretation

Uncertain