SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02721
Pre Gene Modal
BGIBMGA003728
Annotation
PREDICTED:_uncharacterized_protein_LOC105383830_[Plutella_xylostella]
Location in the cell
Extracellular   Reliability : 1.218 Mitochondrial   Reliability : 1.44
 

Sequence

CDS
ATGGCTTTCCGGAACTTCGCACTAGTCGCCATTCTCATCGTTGCTATCATAGCTCCACACTTCACAGCACAACCACCAACAGCAGATGATATAATAAGCAAGGACCGATATCAGAGACAATCTGCAATTAAAGCGGGTTACTCCATTGCAACGAAGCCAAAATGGGGTTTCTTCGGGACTGTATTTAATCTTATTAAAGAGCAAGTCAACGATACCAAAAGTGCATACAGTCAAATTTCTGATTTAGTCAACAATCAATTTTCCGATGGTAATACTGCGACGACAGAAACTATTGCTGTAAATGGAACTACACCAACACCTAAGATATCTAGAGCAGATTTCCTGAATATTCTTGATAGAAATCTGAAAGGTTTAGCCCGTCTTCGCGCATTAGAATGGCGAGAAGCAAAAAAGGATTCGGCGGCAAATTTACGAGAGTACAAAGATGAAATATTTACCGGAAAACGATTAAAAAACAGTAGATAA
Protein
MAFRNFALVAILIVAIIAPHFTAQPPTADDIISKDRYQRQSAIKAGYSIATKPKWGFFGTVFNLIKEQVNDTKSAYSQISDLVNNQFSDGNTATTETIAVNGTTPTPKISRADFLNILDRNLKGLARLRALEWREAKKDSAANLREYKDEIFTGKRLKNSR

Summary

EMBL
BABH01008012    NWSH01001393    PCG71397.1    ODYU01004830    SOQ45116.1    GAIX01012330    + More
JAA80230.1    KQ459597    KPI94840.1    KQ460207    KPJ16725.1    GDQN01005021    JAT86033.1    JRES01001070    KNC25788.1    CVRI01000004    CRK87241.1    GEZM01100563    JAV52854.1    CH964239    EDW81999.2    KK852631    KDR19837.1    GAMC01002821    JAC03735.1    AE014298    ABW09375.1    ABW09376.2    CH479194    EDW27153.1    CH916370    EDW00528.1    CH379065    EAL31459.3    CP012528    ALC48325.1    GDHF01009368    JAI42946.1    QOIP01000004    RLU24167.1    GBXI01003287    JAD11005.1    CH480830    EDW45665.1    GAKP01010790    JAC48162.1    JXJN01011961    CCAG010009366    CH933810    EDW07872.1    KRF94252.1    KRF94253.1    CAQQ02395085    CH954180    EDV46216.1    CM000162    EDX02887.1    CH902635    EDV33746.2    NNAY01001551    OXU23626.1    GEBQ01001789    JAT38188.1    KZ288192    PBC34286.1    GBYB01002217    JAG71984.1    GBYB01002214    GBYB01002218    JAG71981.1    JAG71985.1    GGMS01014184    MBY83387.1    ADTU01008957    AXCN02001340    CH940651    EDW65761.2    GL446459    EFN87763.1    KQ978095    KYM97044.1    APCN01001053    KK107453    EZA50590.1    OUUW01000003    SPP78021.1    KQ435850    KOX70918.1    KQ414572    KOC71302.1   

Ontologies

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.965477
 
 
Length:
161
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.08766
Exp number, first 60 AAs:
17.93731
Total prob of N-in:
0.86447
POSSIBLE N-term signal
sequence
inside
1  -  4
TMhelix
5  -  24
outside
25  -  161
 
 

Population Genetic Test Statistics

Pi
175.724257
Theta
159.859162
Tajima's D
-0.785433
CLR
1345.864182
CSRT
0.181540922953852
Interpretation
Uncertain
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