Gene

KWMTBOMO02707

Pre Gene Modal

BGIBMGA003732

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr5(-):9333329-9351860      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.018 Nuclear   Reliability : 1.501

CDS

ATGCACTTCGAGCAGTCGGCCATATTGACCGTTCACAATCACGTAATCACGAGGAACCCCCGTGTGAGCGTTACACATGACAAGCACCGGACGTGGTTTCTTCATATATCTGACGTCCGAGAAGAAGATAAAGGCCGCTACATGTGTCAGATCAACACTGTTACTGCTAAAACACAGTTCGGATACTTGCATGTTGTCGTTCCGCCCACTATCGACGACTCATTGAGCTCGAGCGATGTTATCGTCAGGGAGGGCGCCAACGTCACCCTGACATGCCGCGCTAATGGCTCTCCTAAGCCTACCATCAAGTGGAAACGGGATGACAACTCGAGAATCTCCATCACTAAAGGCCATTCCGTTTTGGAGTGGGAAGGTGAAGTTCTGGAAATGTTAAGAATTTCGCGTTTGGATATGGGAGCTTATCTCTGCATCGCCAGTAACGGAGTGCCTCCGACCGTTTCTAAGCGTGTTAAAGTCAGCGTGGATTTCCCTCCTATGTTATGGATACCTCATCAACTAGTCGGCGCTCCCTTGTATTACAACGTAACATTAGAATGTTTCACCGAGGCCCATCCGACATCACTGAACTATTGGACGAGAGACGATGGCCACATGATACATGAAAGTCTTAAATATCACATGGAGAACACCGTCGGAGCCCTCGCTTACAAGACGCACATGAAATTATTGATCAGACACATCACGAGCGAGGATTACGGAACTTACAAATGTGTCGCCAAGAACCCGAGAGGCGAATCCGATGGAACAATAAGGCTTTATACTTCATCGCCACCGACGACTACTCCAGATCCTAATGCAATGACCGTTCCACCGCCGTCACGACCGCCTAGACGAGATACTCCCGCCTCAGACAAAGGTACTAAATATCAATCCAACTTGAATGAGATTGATAAAGGCAAACAGAAAACTGATGAAGGGGGCGGGAAGGCAACCTTCAACTGGGTTGAAGGGGCATCACAAGTTACAGGTAAAGCTGACCGAAGAAGAACCAGCTACAGCATTGTGTTGTTTTACGTCTCTTACTTTTTATTTTTTAAATTTTAA

Protein

MHFEQSAILTVHNHVITRNPRVSVTHDKHRTWFLHISDVREEDKGRYMCQINTVTAKTQFGYLHVVVPPTIDDSLSSSDVIVREGANVTLTCRANGSPKPTIKWKRDDNSRISITKGHSVLEWEGEVLEMLRISRLDMGAYLCIASNGVPPTVSKRVKVSVDFPPMLWIPHQLVGAPLYYNVTLECFTEAHPTSLNYWTRDDGHMIHESLKYHMENTVGALAYKTHMKLLIRHITSEDYGTYKCVAKNPRGESDGTIRLYTSSPPTTTPDPNAMTVPPPSRPPRRDTPASDKGTKYQSNLNEIDKGKQKTDEGGGKATFNWVEGASQVTGKADRRRTSYSIVLFYVSYFLFFKF

Uniprot

H9J2J5   A0A2H1VTS3   A0A2A4K2W5   A0A212FB85   A0A194PN24   A0A0L7LTT7   + More
A0A194RFX1   A0A1Y1NGG7   A0A1Y1NGK9   D6WKK2   A0A1B6CJR4   A0A1B6DCE4   A0A1B6ENA4   A0A1B6MB79   A0A1B6JAN5   A0A3F2YSM1   E0VHZ7   W5J5E7   A0A1S4F9I2   A0A1B6H1T5   A0A084VCM4   A0A0Q9WJ83   B4LV05   A0A0Q9WKQ0   A0A0Q9WI56   A0A1W4UYM6   B4JQ60   A0A1W4VAY0   A0A3L8DW57   A0A3B0JUQ9   A0A0P8Y580   A0A0J9QZ51   Q9VLF0   Q6NNU3   A0A336LTH6   B4KFC5   A0A1W4UY81   A0A0P8XH71   A0A1I8MQE0   A0A0A1WVN9   A0A182W8U0   B4GJ96   A0A0K8VST7   A0A0Q9W874   B4MU82   A0A1A9W018   A0A3B0KJB9   A0A0Q9XDN4   A0A0Q9XHP7   A0A1A9V9M6   B4NY09   A0A034WW02   B5DKB1   B4HYU6   M9MSH3   W8BPW7   B4Q7D1   B3N7X0   A0A1A9XGX5   A0A0M4EQJ2   B3MUR9   K7IXI1   A0A0P8XHF2   A0A182RWT5   A0A1S4H2I8   A0A182F2A2   A0A1I8P1G5   A0A182HRB9   A0A232FGJ6   T1HRD6   A0A1J1IG10   A0A182QS35   Q17NU7   A0A182NNW7   A0A0A1WPV1   A0A0A1XCJ9   A0A0K8UST2   A0A0K8V6E6   A0A1B0CW35   W8BQP4   W5JF04   A0A182JM03   A0A0Q9X4S6   A0A3B0JYM0   A0A182KAC6   A0A0Q9X4Q9   A0A2S2PQH1   B4LQU4   A4IJ70   B4P0E5   A0A0Q5WP59   A0A0J9QWY5   A0A0R3NVF6   B3MKF4   B4JBP2   B3N5I8   A0A2S2QWW1   A0A2H8TCV6   A0A2S2Q0I4   A0A0Q9WQC8  

Pubmed

19121390    22118469    26354079    26227816    28004739    18362917    + More
19820115    20566863    20920257    23761445    24438588    17994087    30249741    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    25830018    17550304    25348373    15632085    24495485    20075255    12364791    28648823    17510324    23185243   

EMBL

BABH01008049    BABH01008050    ODYU01004387    SOQ44210.1    NWSH01000208    PCG78389.1    + More
AGBW02009362    OWR51005.1    KQ459597    KPI94831.1    JTDY01000102    KOB78857.1    KQ460207    KPJ16713.1    GEZM01002961    JAV97033.1    GEZM01002960    JAV97034.1    KQ971342    EFA04013.2    GEDC01023572    JAS13726.1    GEDC01013937    JAS23361.1    GECZ01030393    JAS39376.1    GEBQ01006795    JAT33182.1    GECU01011462    JAS96244.1    APCN01001669    APCN01001670    APCN01001671    APCN01001672    DS235174    EEB13003.1    ADMH02002168    ETN58090.1    GECZ01001126    JAS68643.1    ATLV01010838    KE524620    KFB35718.1    CH940649    KRF80990.1    EDW63254.1    KRF80992.1    KRF80991.1    CH916372    EDV99040.1    QOIP01000003    RLU24552.1    OUUW01000010    SPP85847.1    CH902624    KPU74227.1    CM002910    KMY89210.1    KMY89211.1    AE014134    BT044554    AAF52743.3    AAF52744.3    ACI12879.1    BT011190    AAR88551.1    UFQT01000114    SSX20261.1    CH933807    EDW12025.1    KPU74225.1    GBXI01011606    JAD02686.1    CH479184    EDW37410.1    GDHF01010380    JAI41934.1    KRF80989.1    CH963852    EDW75671.2    SPP85846.1    KRG03044.1    KRG03043.1    CM000157    EDW88611.2    GAKP01000173    JAC58779.1    CH379062    EDY70737.2    CH480818    EDW52226.1    ADV36994.1    GAMC01005538    JAC01018.1    CM000361    EDX04325.1    KMY89209.1    CH954177    EDV58331.2    CP012523    ALC39032.1    EDV32984.1    AAZX01005183    AAZX01005681    AAZX01007227    AAZX01007962    AAZX01008114    AAZX01011237    AAZX01013447    AAZX01017968    AAZX01020954    AAZX01021240    KPU74226.1    AAAB01008980    APCN01001675    APCN01001676    APCN01001677    NNAY01000225    OXU29881.1    ACPB03002883    CVRI01000047    CRK97385.1    AXCN02001994    AXCN02001995    CH477196    EAT48377.1    GBXI01013601    JAD00691.1    GBXI01006104    JAD08188.1    GDHF01022899    JAI29415.1    GDHF01017812    JAI34502.1    AJWK01031688    AJWK01031689    AJWK01031690    AJWK01031691    AJWK01031692    AJWK01031693    GAMC01005173    JAC01383.1    ADMH02001679    ETN61465.1    KRG03088.1    SPP86163.1    KRG03087.1    GGMR01019090    MBY31709.1    EDW63478.2    BT030428    ABO52848.1    ACL83005.1    EDW87903.2    KQS70616.1    KMY88508.1    KRT05079.1    KRT05080.1    CH902620    EDV31507.2    CH916368    EDW02977.1    EDV59067.2    GGMS01013025    MBY82228.1    GFXV01000115    MBW11920.1    GGMS01001978    MBY71181.1    CH963857    KRF98420.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000037510    UP000053240    + More
UP000007266    UP000075840    UP000009046    UP000000673    UP000030765    UP000008792    UP000192221    UP000001070    UP000279307    UP000268350    UP000007801    UP000000803    UP000009192    UP000095301    UP000075920    UP000008744    UP000007798    UP000091820    UP000078200    UP000002282    UP000001819    UP000001292    UP000000304    UP000008711    UP000092443    UP000092553    UP000002358    UP000075900    UP000069272    UP000095300    UP000215335    UP000015103    UP000183832    UP000075886    UP000008820    UP000075884    UP000092461    UP000075880    UP000075881   

PRIDE

H9J2J5    Q9VLF0    Q6NNU3    A4IJ70   

Pfam

PF07679   I-set        + More
PF00147   Fibrinogen_C
PF00047   ig

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR003598   Ig_sub2       
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013098   Ig_I-set       
IPR036056   Fibrinogen-like_C       
IPR014715   Fibrinogen_a/b/g_C_2       
IPR014716   Fibrinogen_a/b/g_C_1       
IPR002181   Fibrinogen_a/b/g_C_dom       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726        + More
SSF56496   SSF56496       

Gene 3D

2.60.40.10     3.90.215.10     4.10.530.10    

CDD

cd00087  FReD

ProteinModelPortal

H9J2J5   A0A2H1VTS3   A0A2A4K2W5   A0A212FB85   A0A194PN24   A0A0L7LTT7   + More
A0A194RFX1   A0A1Y1NGG7   A0A1Y1NGK9   D6WKK2   A0A1B6CJR4   A0A1B6DCE4   A0A1B6ENA4   A0A1B6MB79   A0A1B6JAN5   A0A3F2YSM1   E0VHZ7   W5J5E7   A0A1S4F9I2   A0A1B6H1T5   A0A084VCM4   A0A0Q9WJ83   B4LV05   A0A0Q9WKQ0   A0A0Q9WI56   A0A1W4UYM6   B4JQ60   A0A1W4VAY0   A0A3L8DW57   A0A3B0JUQ9   A0A0P8Y580   A0A0J9QZ51   Q9VLF0   Q6NNU3   A0A336LTH6   B4KFC5   A0A1W4UY81   A0A0P8XH71   A0A1I8MQE0   A0A0A1WVN9   A0A182W8U0   B4GJ96   A0A0K8VST7   A0A0Q9W874   B4MU82   A0A1A9W018   A0A3B0KJB9   A0A0Q9XDN4   A0A0Q9XHP7   A0A1A9V9M6   B4NY09   A0A034WW02   B5DKB1   B4HYU6   M9MSH3   W8BPW7   B4Q7D1   B3N7X0   A0A1A9XGX5   A0A0M4EQJ2   B3MUR9   K7IXI1   A0A0P8XHF2   A0A182RWT5   A0A1S4H2I8   A0A182F2A2   A0A1I8P1G5   A0A182HRB9   A0A232FGJ6   T1HRD6   A0A1J1IG10   A0A182QS35   Q17NU7   A0A182NNW7   A0A0A1WPV1   A0A0A1XCJ9   A0A0K8UST2   A0A0K8V6E6   A0A1B0CW35   W8BQP4   W5JF04   A0A182JM03   A0A0Q9X4S6   A0A3B0JYM0   A0A182KAC6   A0A0Q9X4Q9   A0A2S2PQH1   B4LQU4   A4IJ70   B4P0E5   A0A0Q5WP59   A0A0J9QWY5   A0A0R3NVF6   B3MKF4   B4JBP2   B3N5I8   A0A2S2QWW1   A0A2H8TCV6   A0A2S2Q0I4   A0A0Q9WQC8  

PDB

6EG1     E-value=1.66911e-73,     Score=701

KEGG

101741021    no KO assigned | (RefSeq) lachesin-like

GO

GO:0050808   GO:0016021   GO:0005887   GO:0016787   GO:0005515   GO:0000166   GO:0016020   GO:0007264   GO:0005524   GO:0016459   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

354

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.26703

Exp number, first 60 AAs:

0.00021

Total prob of N-in:

0.05277

outside

1  -  354

 

 

Pi

236.939494

Theta

172.28377

Tajima's D

1.076085

CLR

0.548692

CSRT

0.68011599420029

Interpretation

Uncertain