Gene

KWMTBOMO02697

Pre Gene Modal

BGIBMGA003459

Annotation

PREDICTED:_RING-box_protein_2_[Papilio_xuthus]

Location

Bomo_Chr5(+):9103625-9140209      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.929 Nuclear   Reliability : 1.767

CDS

ATGTCCGGTGAAGACTGTGATGGTATGGACCGTGGGGATAACGATGGTCCAAAATCCGATAAAATGTTCACATTGAAAAAATGGAATGCTGTTGCAATGTGGAGTTGGGATGTTGAATGTGATACTTGCGCTATTTGCCGCGTGCAAGTAATGGACGCATGTCTTCGGTGCCAGGGTGAGAGCAAGAAGGACTCATACGGGAAGCAGGATTGTGTGGTGGTTTGGGGCGAGTGTAACCATAGCTTCCATTTCTGCTGCATGTCTCTGTGGGTAAAACAGAACAATAGATGCCCGCTCTGCCAACAAGAATGGTCCATACAGCGTATGGGAAAATAA

Protein

MSGEDCDGMDRGDNDGPKSDKMFTLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQGESKKDSYGKQDCVVVWGECNHSFHFCCMSLWVKQNNRCPLCQQEWSIQRMGK

Uniprot

A0A2A4K2C7   S4PCW4   A0A0C9QDQ4   A0A3L8DJ02   A0A1Y1JUE3   A0A1W4X0T8   + More
A0A195D814   A0A1B6CDY6   A0A158NRW2   A0A0T6AVK2   A0A1L8DSX7   N6U139   A0A034WGW7   A0A0A1XH84   A0A2A3EQP4   A0A088AU84   A0A0L7RB07   A0A0K8U0W8   W8C9H8   A0A1I8MMC2   A0A2M4CSU9   A0A2M3ZCE2   A0A2M4AY53   A0A2M4C443   Q7PNW0   A0A0A9YIK3   U5ERX6   A0A1Q3FUT0   A0A1Q3FUL8   A0A1B6KGS8   A0A1S4G7L8   A0A023EEY9   A0A1B6ILT2   A0A1B6G9I3   A0A026WLS9   A0A0K8TT80   A0A1I8P7T6   B4KR04   A0A1L8ECU5   B4J912   B4LPX4   A0A224Y1F5   A0A0V0GC86   A0A023F2P6   A0A0P4VME2   B3NSE0   B4HNJ7   B4QBN0   Q291I0   B4GAP5   B4P623   Q7JWH5   A0A069DN90   A0A3B0J0W5   A0A1L8DSM5   A0A0Q9X2W4   A0A1W4VDA4   J9PCS3   A0A0P4VVC4   A0A1J1I7W9   A0A0B6YZ48   A0A2R5L6C8   A0A0U2V5K0   B3MG56   B7P6D0   V5H0Z2   A0A1S3JXG8   A0A293M067   A0A2P2HZQ7   A0A1Z5LHL1   T1IN99   C3YYC2   A0A2C9LS04   V4AH00   A0A131ZAC8   V9LDD5   A0A2U9B5F3   K7FSF5   A0A3B3D1Q3   A0A3P9ILT3   A0A1U7QTU0   H2M7V6   A0A3P9KXZ6   Q4SWU6   A0A2K6SIT9   A0A224Z707   L7M3T6   A0A131X9Y6   I3JE63   A0A0C9SA61   A0A023FG31   A0A1E1WZD7   A0A2U9B5D9   A0A0E9WKX9   A0A0B8RTX8   A0A1W7RE40   J3SD12   H2SUJ8   A0A3B4X7B7   A0A3B5A3B8  

Pubmed

23622113    30249741    28004739    21347285    23537049    25348373    + More
25830018    24495485    25315136    12364791    14747013    17210077    25401762    26823975    24945155    24508170    26369729    17994087    25474469    27129103    22936249    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26334808    29775751    26621068    25765539    28528879    18563158    15562597    23254933    26830274    24402279    17381049    29451363    17554307    15496914    28797301    25576852    28049606    25186727    26131772    28503490    25613341    25476704    26358130    23025625    21551351   

EMBL

NWSH01000208    PCG78397.1    GAIX01003931    JAA88629.1    GBYB01012568    JAG82335.1    + More
QOIP01000007    RLU20296.1    GEZM01102816    JAV51778.1    KQ981153    KYN09030.1    GEDC01025635    JAS11663.1    ADTU01024382    ADTU01024383    ADTU01024384    ADTU01024385    ADTU01024386    ADTU01024387    ADTU01024388    LJIG01022734    KRT78989.1    GFDF01004525    JAV09559.1    APGK01043768    KB741017    KB631644    ENN75260.1    ERL84944.1    GAKP01005013    JAC53939.1    GBXI01003966    JAD10326.1    KZ288203    PBC33459.1    KQ414617    KOC68049.1    GDHF01031940    GDHF01028539    GDHF01027926    GDHF01024388    GDHF01016083    GDHF01012643    GDHF01008401    GDHF01008333    GDHF01006931    GDHF01000407    JAI20374.1    JAI23775.1    JAI24388.1    JAI27926.1    JAI36231.1    JAI39671.1    JAI43913.1    JAI43981.1    JAI45383.1    JAI51907.1    GAMC01002139    JAC04417.1    GGFL01004246    MBW68424.1    GGFM01005421    MBW26172.1    GGFK01012415    MBW45736.1    GGFJ01010946    MBW60087.1    AAAB01008960    EAA11465.4    GBHO01012676    GBRD01011744    GDHC01007984    JAG30928.1    JAG54080.1    JAQ10645.1    GANO01003510    JAB56361.1    GFDL01003747    JAV31298.1    GFDL01003745    JAV31300.1    GEBQ01029341    JAT10636.1    GAPW01006314    GAPW01006313    GAPW01006312    JAC07285.1    GECU01019851    JAS87855.1    GECZ01010826    JAS58943.1    KK107152    EZA57000.1    GDAI01000488    JAI17115.1    CH933808    EDW10360.1    GFDG01002262    JAV16537.1    CH916367    EDW01361.1    CH940648    EDW61314.1    GFTR01001556    JAW14870.1    GECL01000411    JAP05713.1    GBBI01003403    JAC15309.1    GDKW01002642    JAI53953.1    CH954179    EDV56442.1    CH480816    EDW47433.1    CM000362    CM002911    EDX06647.1    KMY93019.1    CM000071    EAL25132.1    CH479181    EDW31997.1    CM000158    EDW90898.1    AE013599    AY113544    BT072910    AAF58633.2    AAM29549.1    ACN81331.1    ACZ94394.1    GBGD01003599    JAC85290.1    OUUW01000001    SPP74694.1    GFDF01004611    JAV09473.1    CH963894    KRF98572.1    GU002537    MG807607    MG807609    ADF87937.1    AWP38852.1    GDRN01111715    JAI56738.1    CVRI01000043    CRK96407.1    HACG01014081    CEK60946.1    GGLE01000922    MBY05048.1    KT754387    ALS04221.1    CH902619    EDV36751.1    ABJB010027197    DS644582    EEC02152.1    GADI01004871    GANP01007818    GEFM01001827    JAA68937.1    JAB76650.1    JAP73969.1    GFWV01008689    MAA33418.1    IACF01001415    LAB67116.1    GFJQ02000101    JAW06869.1    JH431152    GG666564    EEN54741.1    KB201549    ESO96187.1    GEDV01001131    JAP87426.1    JW877893    AFP10410.1    CP026245    AWO99172.1    AGCU01063843    CAAE01013510    CAF94886.1    GFPF01011437    MAA22583.1    GACK01006507    JAA58527.1    GEFH01004758    JAP63823.1    AERX01007253    GBZX01002798    JAG89942.1    GBBK01004412    JAC20070.1    GFAC01006831    JAT92357.1    AWO99173.1    GBXM01017636    JAH90941.1    GBSH01002280    JAG66746.1    GDAY02002040    JAV49392.1    JU175661    GBEX01002854    AFJ51185.1    JAI11706.1   

Proteomes

UP000218220    UP000279307    UP000192223    UP000078492    UP000005205    UP000019118    + More
UP000030742    UP000242457    UP000005203    UP000053825    UP000095301    UP000007062    UP000053097    UP000095300    UP000009192    UP000001070    UP000008792    UP000008711    UP000001292    UP000000304    UP000001819    UP000008744    UP000002282    UP000000803    UP000268350    UP000007798    UP000192221    UP000183832    UP000007801    UP000001555    UP000085678    UP000001554    UP000076420    UP000030746    UP000246464    UP000007267    UP000261560    UP000265200    UP000189706    UP000001038    UP000265180    UP000233220    UP000005207    UP000005226    UP000261360    UP000261400   

PRIDE

Q7JWH5   

Pfam

PF12678   zf-rbx1

Interpro

IPR001841   Znf_RING        + More
IPR024766   Znf_RING_H2       
IPR013083   Znf_RING/FYVE/PHD       

Gene 3D

3.30.40.10    

ProteinModelPortal

A0A2A4K2C7   S4PCW4   A0A0C9QDQ4   A0A3L8DJ02   A0A1Y1JUE3   A0A1W4X0T8   + More
A0A195D814   A0A1B6CDY6   A0A158NRW2   A0A0T6AVK2   A0A1L8DSX7   N6U139   A0A034WGW7   A0A0A1XH84   A0A2A3EQP4   A0A088AU84   A0A0L7RB07   A0A0K8U0W8   W8C9H8   A0A1I8MMC2   A0A2M4CSU9   A0A2M3ZCE2   A0A2M4AY53   A0A2M4C443   Q7PNW0   A0A0A9YIK3   U5ERX6   A0A1Q3FUT0   A0A1Q3FUL8   A0A1B6KGS8   A0A1S4G7L8   A0A023EEY9   A0A1B6ILT2   A0A1B6G9I3   A0A026WLS9   A0A0K8TT80   A0A1I8P7T6   B4KR04   A0A1L8ECU5   B4J912   B4LPX4   A0A224Y1F5   A0A0V0GC86   A0A023F2P6   A0A0P4VME2   B3NSE0   B4HNJ7   B4QBN0   Q291I0   B4GAP5   B4P623   Q7JWH5   A0A069DN90   A0A3B0J0W5   A0A1L8DSM5   A0A0Q9X2W4   A0A1W4VDA4   J9PCS3   A0A0P4VVC4   A0A1J1I7W9   A0A0B6YZ48   A0A2R5L6C8   A0A0U2V5K0   B3MG56   B7P6D0   V5H0Z2   A0A1S3JXG8   A0A293M067   A0A2P2HZQ7   A0A1Z5LHL1   T1IN99   C3YYC2   A0A2C9LS04   V4AH00   A0A131ZAC8   V9LDD5   A0A2U9B5F3   K7FSF5   A0A3B3D1Q3   A0A3P9ILT3   A0A1U7QTU0   H2M7V6   A0A3P9KXZ6   Q4SWU6   A0A2K6SIT9   A0A224Z707   L7M3T6   A0A131X9Y6   I3JE63   A0A0C9SA61   A0A023FG31   A0A1E1WZD7   A0A2U9B5D9   A0A0E9WKX9   A0A0B8RTX8   A0A1W7RE40   J3SD12   H2SUJ8   A0A3B4X7B7   A0A3B5A3B8  

PDB

2ECL     E-value=4.05753e-25,     Score=277

KEGG

105842826    K10611 RING-box protein 2 [EC:2.3.2.32] | (RefSeq) RING-box protein 2-like

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0008270   GO:0016874   GO:0031466   GO:0031461   GO:0043224   GO:0080008   GO:0097602   GO:0031467   GO:0061630   GO:0006511   GO:0019788   GO:0031146   GO:0045116   GO:0031462   GO:0005634   GO:0031463   GO:0005737   GO:0005829   GO:0016567   GO:0005654   GO:0021799   GO:0006919   GO:0021942   GO:0043066   GO:0008631   GO:0008637   GO:0005515   GO:0016020   GO:0007264   GO:0005524   GO:0016459   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

111

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03478

Exp number, first 60 AAs:

0.00268

Total prob of N-in:

0.23345

outside

1  -  111

 

 

Pi

240.594085

Theta

166.898528

Tajima's D

0.654506

CLR

0.384654

CSRT

0.562321883905805

Interpretation

Uncertain