SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02696  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA003458
Annotation
PREDICTED:_uncharacterized_protein_LOC106100834_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 3.33
 

Sequence

CDS
ATGTATTGGCTACCATTCTTTATGGTAGCTGTTGTGGGTACTACCCACGGACAACTAACGGCGCAGTCCAGTATCGCACCAGAGCTACGGGAATGCTATTTTGATCCCATACTGTTAAACAGAAACAATCTCCCTCCGACCACAATTCCTGTTCTCATTGACATCATTCGTAGAATCGAAGATAATCCTGATGTGAACATGGACTTAAGACAACTGTCCGCGTTACTTCTTCACACGTACCGCCAAGATGGTATAGAATTTCACCAGCCGGAAGGTAATTTAGCCATATCTTCGAATGTGATACCGTTTGCACCAACCTTCCACTCCTTTCATCGTCACAGGCTGCTACTAACAAGACTCATACCTAGTAATTTGCAGACACTTGGAAATACAACTGTTAATTCAGTGCTCAAGTGCACTCTACATCACATGTTGTCGACAACCGTTGACGCAAGACTGAGAGGAGATGAAAGCAATTGTAACCAGTTGTCACAGTATCGTGCGCTAAGAACAGGACGATCAATTAGCGATGACGTTGAAATTTTAGATACTTCCTTACTAAAAACTAATGATAAAAATGGGCAAATGCGGAATTTTGATCCAAACAGTGACGTTGAGTATACTAGTAATTACGGTAGTCTTAAATCTGAACGCCAATTACTCGGAGAAAGTCAATGCCCACTATTAGATGGAGTGATTTTCACCCAATGGGGAGCTGTATCAGGGGGAAACCTCATAGCTGGTATTGCGGCAGGTGCTCAACCACAACAGGTTCCTGTTCTTGAACTTGCAAAAGGATCTGTTTTAAATTATCCGAATGTCCAACAAACTGTGACTTCACTGTATCCAGCAACACTCTCAGGTGATTTGGCCGAGGCAATTCTTATTCAAGGAACTGAAAGAGGCAGTTCATCAATTTCGATCGGTACAGCAGGAAACTGGAACAGCACTCAAGCGCCTAGACACTTCATGATTCACAGCCGTGTCAACATAGAAATGACCGATCCAGAAATCAGAGGAGGCATCGATGGCTTTGTTCTCGGCAGTGCAATAACCTCAGTTTTAGGAACTTTTAGTTCTTTGAGACTGTCGCAGCTGTTGGACATGTATTATACACCGCGGAATGGGATATTTAGTCAAGCTTTTCGTGCATGTAACCGTCGCGAATTGAGTCAAACGCATATCACAAATCAAAATTTAGCTGGGGAAACTTTTGCCTTTGCTGCCGCTCTTGATACGAACATGCCACTTAGAGGAACTATAATGGGTGGCCTCGAGCAACTAGTGAACAGCGCAGTCACCAATTTCCAAACATATTCTACTAGCAATTTGAACGACTTAAGCTGTGTTACCTCAGTAGCAACGAGCCTGGATTACAGATTAAAAACGAATTTGTATATAGTTCTTGACTCATCATGGCCATACCAAGCAGTGTATCCGGCCATTGCATATTTAGTGGATTCAATAGAAGTAGACAAATTCGGATCGAGCATCACCCTGCTCAATGCATTTGATGGTAGTGTTGTTGTCAACACAACTTTCTCGCAAGTTGAATTCCACTCTAATTACACTTTAGCGGCACATCAATCAATGCTCAATGGAGTAAATCTGCAAACTAGTCTGACAAACATCAGAATAATGATGCAAGACCAACTTCGTAATGAAAGCGCAAGAAATTACGTAGGAGGAAATTCAACTGTAGTGTTGTACCTCATCAATACCGGTCATCTACAGAACAATGAAATAGTTTTTGAACAAGCCCGACTTCTTAATGAAACAGTTCCGGATTTGAGGCTACTTTTTGCGACTGCTACGAATCAGTTCGATAACATATGGAATTTGGTGCGTGATATTCACAACGACATCAGGGCGGTATCTTTGGCTACAACAGGCACAAACGTACCAATAGTCATGAGCCCAGTCCTGGAAAGAATTCAGTCAGTTGGAAGAAGAATTGTGAATCCTCTTTGTGGTTCACAGTTTGTTGATCAATTGTCAGGCACGAGACAGTTTGACGACTTCGTGGAACCTGGTTATATTAATTTCTACACAGTTAGTCCCAATTACTTTTATGTACACAATGATAACAGAAGAATCAGAATTTCTCGAAGTGCGAGTGGGGCTGGAAGTCTTGTTGTGTGTCATTCAAGAGCTGTTGCTCAACCAAGACGCAACACAACAATAGTAGGACTTGATCCAAGCGCAATAACTTGTGAGAATTTGGCTTCCACCGGAAATATTGAAATAAGGCTGCAGAATGCTTGCGACAGTTTTTGGACCATAGGATCATGTCCACCACTACACATTTCCGTACAATCAGAAACTGGTGGTGTTGATGCCACAAGCGCGATTTGCACAGATGCTTCGGTATGCAGATTCCCATACAACATTAGATATCAAGTCCAAATTGAAGACCTGGGGTGTTTTAGTGGAGCATCAAGTCTAGGAGCCAGCCTCGCAATTATTCTGACTTCTTTGTATCTCGCAATATTCTAA
Protein
MYWLPFFMVAVVGTTHGQLTAQSSIAPELRECYFDPILLNRNNLPPTTIPVLIDIIRRIEDNPDVNMDLRQLSALLLHTYRQDGIEFHQPEGNLAISSNVIPFAPTFHSFHRHRLLLTRLIPSNLQTLGNTTVNSVLKCTLHHMLSTTVDARLRGDESNCNQLSQYRALRTGRSISDDVEILDTSLLKTNDKNGQMRNFDPNSDVEYTSNYGSLKSERQLLGESQCPLLDGVIFTQWGAVSGGNLIAGIAAGAQPQQVPVLELAKGSVLNYPNVQQTVTSLYPATLSGDLAEAILIQGTERGSSSISIGTAGNWNSTQAPRHFMIHSRVNIEMTDPEIRGGIDGFVLGSAITSVLGTFSSLRLSQLLDMYYTPRNGIFSQAFRACNRRELSQTHITNQNLAGETFAFAAALDTNMPLRGTIMGGLEQLVNSAVTNFQTYSTSNLNDLSCVTSVATSLDYRLKTNLYIVLDSSWPYQAVYPAIAYLVDSIEVDKFGSSITLLNAFDGSVVVNTTFSQVEFHSNYTLAAHQSMLNGVNLQTSLTNIRIMMQDQLRNESARNYVGGNSTVVLYLINTGHLQNNEIVFEQARLLNETVPDLRLLFATATNQFDNIWNLVRDIHNDIRAVSLATTGTNVPIVMSPVLERIQSVGRRIVNPLCGSQFVDQLSGTRQFDDFVEPGYINFYTVSPNYFYVHNDNRRIRISRSASGAGSLVVCHSRAVAQPRRNTTIVGLDPSAITCENLASTGNIEIRLQNACDSFWTIGSCPPLHISVQSETGGVDATSAICTDASVCRFPYNIRYQVQIEDLGCFSGASSLGASLAIILTSLYLAIF

Summary

EMBL
BABH01008108    KQ460207    KPJ16700.1    KQ459597    KPI94817.1    NWSH01000208    + More
PCG78393.1    PCG78396.1    PCG78395.1    JTDY01002864    KOB70580.1    AGBW02009362    OWR51017.1    ODYU01005427    SOQ46256.1    CH477774    EAT36358.1    GFDF01010919    JAV03165.1    GFDF01010918    JAV03166.1    ATLV01022343    KE525331    KFB47520.1    APCN01001936    AAAB01008966    EAA13062.4    GFDL01007591    JAV27454.1    GFDL01007510    JAV27535.1    GFDL01006871    JAV28174.1    GFDL01006888    JAV28157.1    GFDL01007077    JAV27968.1    GFDL01007202    JAV27843.1    DS231852    EDS37675.1    GFDG01002462    JAV16337.1    GFDG01002463    JAV16336.1    CH933808    EDW10577.2    CM000071    EAL25730.4    GDHF01006717    GDHF01006604    JAI45597.1    JAI45710.1    GBXI01003044    JAD11248.1    UFQT01001909    SSX32132.1    OUUW01000001    SPP72657.1    CP012524    ALC42833.1    UFQT01003040    SSX34484.1    CH479183    EDW36165.1    GAKP01018418    JAC40534.1    CM000158    EDW92657.1    KRK00630.1    GANO01004630    JAB55241.1    KRK00628.1    CH940648    EDW60152.2    CCAG010000826    KRF79283.1    CM002911    KMY96533.1    CM000362    EDX08664.1    AE013599    AAM68331.2    AGB93709.1    AGB93710.1    BT011094    AAR82760.1    CH954179    EDV57129.1    GAMC01016857    GAMC01016856    JAB89699.1    CH963849    EDW74052.1    CH902619    EDV37269.1    CH916375    EDV98459.1    GEZM01007311    JAV95250.1    CVRI01000059    CRL03128.1    LJIG01022756    KRT78890.1    KZ288215    PBC32582.1    KQ435821    KOX72475.1    KQ435078    KZC14463.1    NNAY01001572    OXU23557.1    CH480838    EDW49312.1    KMY96534.1    KRK00629.1    KRK00627.1    BT083392    ABI31116.2    ACQ66053.1    KQ414735    KOC62307.1    AXCN02001648    GECZ01025851    JAS43918.1    ADMH02001669    ETN61482.1    AXCM01002130    KRK00631.1    GEDC01030956    GEDC01018116    JAS06342.1    JAS19182.1    ADTU01001291    KK107796    QOIP01000013    EZA47608.1    RLU15414.1    GALX01003548    JAB64918.1    KQ971307    EFA11281.1    KQ980989    KYN10547.1    KQ976522    KYM82068.1    GL888217    EGI64731.1    GL435626    EFN72999.1   
Pfam
PF00096   zf-C2H2        + More
PF05427   FIBP
Interpro
IPR015510   PGRP        + More
IPR013087   Znf_C2H2_type       
IPR008614   FIBP       

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.993167
 
 
Length:
831
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
12.49838
Exp number, first 60 AAs:
0.06889
Total prob of N-in:
0.00405
outside
1  -  831
 
 

Population Genetic Test Statistics

Pi
274.518875
Theta
192.845115
Tajima's D
1.468728
CLR
0.175226
CSRT
0.779511024448778
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 AVSLATTGTNVPIVMSPVLER 100.00 9e-07
28556443 TGTNVPIVMSPVLER 100.00 9e-07
28556443 VILDIPFSVR 100.00 9e-07
28556443 QFDDFVEPGYINF 100.00 1e-06
28556443 IVNPLCGSQFVDQLSGTR 100.00 5e-06
28556443 IMMQDQLR 100.00 5e-06
28556443 IEDNPDVNMDLR 100.00 5e-06
28556443 IVNPLCGSQFVDQLSGTR 100.00 1e-05
28556443 IVNPLCGSQFVDQLSGTR 100.00 1e-05
28556443 YFYVHNDNR 100.00 8e-04
28556443 QLSALLLH 100.00 9e-04
28556443 NNLPPTTIPVLIDIIR 100.00 0.001
28556443 NNLPPTTIPVLIDIIR 100.00 0.001
28556443 NNLPPTTIPVLIDIIR 100.00 0.001
28556443 NGIFSQAFR 100.00 0.001
28556443 LSQLLDMYYTPR 100.00 0.001
28556443 LDTNMPLR 100.00 0.003
28556443 AVSLATTGTNVPIVMSPVLER 100.00 0.004
28556443 IMMQDQLR 100.00 0.012
28556443 RIEDNPDVNMDLR 100.00 0.026
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