Gene

KWMTBOMO02689

Pre Gene Modal

BGIBMGA003455

Annotation

PREDICTED:_alpha-catulin_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr5(+):8876525-8893270      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.2

CDS

ATGGATATCCCAAAGGGAATGGCTCACCTTGAGATATCGAATAATTTTCTTCCAGGCCGCGCCATTGAACGAGTGTGTGCTGGGGCCGACGGAGCTGGCATGGTGTCCGCGGCAAGGGCGCTACTCGCGGCTGTCACCAGAGTCTTACTTTTGGCAGACATGGTAGTTGTTCGACAACTATTGCTTGCTAAGGATAAGGTGGCGCGATCGTTAGACCGGCTGGAGTCGGTCTCTAATTTCGCGGAGTTCGTGCGAGCATTCACCAAATTCGGCGGCGGTATGGTGGAACTGGCGCGGCTCACGGCCGAGCGCCGCGCCGACCTGCGGGACGAGCGACGGAGGGCCCAGGTCGCTGCTGCCAGGAATGTACTAGAACGTTCAACACTGATGCTCCTTACTTCGTCAAAGACATGCATGCGACATCCGGGAAGCGCATCGGCGAGAGAAAACCGTGACACTGTTTTTTGTCAAATGCGACGGGCGATGGACCTCATACACTACGTAGTACGAGACGGCTTGCCCGGCCACGAAGAACATGGACATGAGGCAGCTCAGTGGGAGGCAGGGACTGCATTGGGTGCTCTGCGAGGACTGTCATCCCAAGTAAGGGCAGCAAGAGCCCGGGGCGGAGCGGACGCCTCACGCAGACGAGCCCTAGCTGGCACGCTGCGGGCTTTGGTTGAACGAACGCACGACTTCACAGACTCCGCTTACACCTCGCATGAACACAGACAGCAAATACTAGCTCTGGCCGAGAGAATAGCTTACGAGCTGGAGAGACTCGTTGCCGTAGCGGTTTCGCTGGAGGAACAAGGTGGTATAAGTAGTAGCGCTGCACTGGAAAGTGCATGCACAGGCGCTACTGGTGCAGCATCAGAACTAGAACGAGCCCTAGTAGCCGCCGCTCGCGACCAAGCAAGAGACTTGGCCCCACTTGCAGACGAAGCTAAACGTCTCGCTTCGGACCTCGCACATATAGCCAGTTCCTGTGGCGAGAGAGAATCGGAGAGGTTGCATCATATAGCCAGTCGTCTCCACGAACAATTAGACCATATTATAGAGGTATGTAAACTACTTAGACACATAGCAATGTCGGAAACCCTTCAAGTCAGCGCAAAATTTGCCGAAATCAATCTAAGGATATACGGTCCTCAAGTGGTGACGGCAGCGCGCACACTAGCGGCATATCCAGGCAGTGCGGCCGCGCGGGAAAACCTTGACGTCTTCGTGGACATGTGGGCCTGGCTGCTCGCTGACGCCGCACGTCTCGCCACAGAACTGCTCCACATCACAGACGATAAACCCGATAAACAACAGTACAGCAGTTTACCAAGACCCGGTAAACACGGTACGACGAGTAAACCTTTAAAAGCCGTCAAATTGGACTCGGACGAGCAAGCAAAAATAGCGAAATCGGGTCTAGAAATGAAAATGATGTCTTCAGAAATGGACGCTGAGACTGAGAGATGGCAGGGCGCCGCCGCCGACGAAAACAACGACATCGTAAAAAGGGCAAAAAATATGTCTTCCATGGCTTTTGCTATGTATCAATTTACTAAAGGCGAGGGTCGTTTAAATACAACGCAAGACCTATTCACACAAGCAGAGTATTTTGCTGAAGAAGCGAATAGGCTCTATAAGATTGTAAGACAATTTTCATACCAGGTTCCTGCCGGTTCAACAAAAAAAGAACTTCTGGAACATCTGGACAAAGTACCGACCTACGTTCAACAATTACAATTTACGGTAAAGGAGCCCACGGTGGGACGCGCTGCTACATTCAGCAAAGTCGATAACGTCATCCAAGAGACCAAGCACCTCATGAACGTGATAAGTAAAGTTGTCACCACTTGCTTCGAGTGCGCGAACAAGTACAAATTGGAGTTCACGGGTTTATCAGCGGGTGGGGCTGGGTCTGGCGGGGGGCGAGGTACATCGCGGGATGAGGAGGGCGGTGGCGGAGGTGGTGGAGACGCCAAGCCGGGGGGGAGTAGCTCCGACACAGCCATGTGA

Protein

MDIPKGMAHLEISNNFLPGRAIERVCAGADGAGMVSAARALLAAVTRVLLLADMVVVRQLLLAKDKVARSLDRLESVSNFAEFVRAFTKFGGGMVELARLTAERRADLRDERRRAQVAAARNVLERSTLMLLTSSKTCMRHPGSASARENRDTVFCQMRRAMDLIHYVVRDGLPGHEEHGHEAAQWEAGTALGALRGLSSQVRAARARGGADASRRRALAGTLRALVERTHDFTDSAYTSHEHRQQILALAERIAYELERLVAVAVSLEEQGGISSSAALESACTGATGAASELERALVAAARDQARDLAPLADEAKRLASDLAHIASSCGERESERLHHIASRLHEQLDHIIEVCKLLRHIAMSETLQVSAKFAEINLRIYGPQVVTAARTLAAYPGSAAARENLDVFVDMWAWLLADAARLATELLHITDDKPDKQQYSSLPRPGKHGTTSKPLKAVKLDSDEQAKIAKSGLEMKMMSSEMDAETERWQGAAADENNDIVKRAKNMSSMAFAMYQFTKGEGRLNTTQDLFTQAEYFAEEANRLYKIVRQFSYQVPAGSTKKELLEHLDKVPTYVQQLQFTVKEPTVGRAATFSKVDNVIQETKHLMNVISKVVTTCFECANKYKLEFTGLSAGGAGSGGGRGTSRDEEGGGGGGGDAKPGGSSSDTAM

Uniprot

A0A2A4JKI0   A0A2A4JLD8   A0A212ESR6   A0A2H1W2Z1   A0A0L7LVK0   A0A194RL35   + More
A0A194PPZ7   A0A0J7LA50   A0A151K0G0   A0A026VSZ5   E2B5J0   A0A158NMD3   F4W708   E2AZV3   A0A195C1U3   A0A195AX89   A0A151X7W8   A0A195DB05   K7IVA9   A0A310SLT4   A0A0L7QRJ2   A0A232F6X7   D6WHX5   A0A087ZXV1   A0A0M8ZWP4   A0A067RP86   N6TVN8   A0A1W4XIY7   A0A139WLL1   T1IXC7   A0A146M499   A0A0A9XDS0   A0A0A9XJ70   A0A0A9XGS7   A0A023F4F3   T1HZG9   A0A3Q0IW29   A0A154P371   A0A2A3EB84   E0VMD4   A0A2S2Q0D0   A0A0T6AYQ5   A0A2H8TWX9   E9GV61   A0A2J7QKU9   A0A2P8Z7D2   A0A2P2I2K4   A0A1S3JDR4   A0A1S3JE76   A0A1S3JF05   V9ILE5   A0A210R5Z0   F1KTV8   A0A0L8GDD3   A0A0V0S2D1   A0A3P6U816   A0A0V0XL88   A0A0V1AAE0   A0A0V1HJL9   A0A0V1CTA9   A0A0V0XBH6   A0A0V1MZM3   A0A0V0V130   A0A0V0UHR1   A0A0V1P2R8   A0A0V1BFM3   A0A0B2VCN7  

Pubmed

22118469    26227816    26354079    24508170    20798317    21347285    + More
21719571    20075255    28648823    18362917    19820115    24845553    23537049    26823975    25401762    25474469    20566863    21292972    29403074    26383154    28812685    21685128   

EMBL

NWSH01001105    PCG72585.1    PCG72586.1    AGBW02012767    OWR44494.1    ODYU01005960    + More
SOQ47393.1    JTDY01000016    KOB79409.1    KQ460207    KPJ16691.1    KQ459597    KPI94809.1    LBMM01000074    KMR05066.1    KMR05067.1    KQ981253    KYN44181.1    KK108141    EZA46857.1    GL445834    EFN89034.1    ADTU01002236    ADTU01002237    ADTU01002238    ADTU01002239    ADTU01002240    ADTU01002241    GL887802    EGI69998.1    GL444277    EFN61082.1    KQ978344    KYM94817.1    KQ976716    KYM76801.1    KQ982431    KYQ56467.1    KQ981042    KYN10068.1    AAZX01001180    AAZX01011393    AAZX01012422    KQ764369    OAD54529.1    KQ414784    KOC61116.1    NNAY01000771    OXU26604.1    KQ971321    EFA00710.2    KQ435834    KOX71596.1    KK852549    KDR21554.1    APGK01052772    APGK01052773    APGK01052774    KB741216    ENN72461.1    KYB28715.1    JH431646    GDHC01004370    JAQ14259.1    GBHO01024732    GDHC01012629    JAG18872.1    JAQ06000.1    GBHO01024731    JAG18873.1    GBHO01024733    GDHC01018820    JAG18871.1    JAP99808.1    GBBI01002813    JAC15899.1    ACPB03016118    KQ434796    KZC05580.1    KZ288294    PBC28985.1    DS235307    EEB14540.1    GGMS01002003    MBY71206.1    LJIG01022513    KRT80186.1    GFXV01006624    MBW18429.1    GL732567    EFX76664.1    NEVH01013256    PNF29199.1    PYGN01000163    PSN52400.1    IACF01002581    LAB68229.1    JR053250    AEY61890.1    NEDP02000189    OWF56469.1    JI165785    ADY41312.1    KQ422385    KOF74953.1    JYDL01000047    KRX20629.1    UYRX01000128    VDK74918.1    JYDU01000225    JYDR01000047    JYDT01000117    JYDS01000286    JYDV01000012    KRX88719.1    KRY72237.1    KRY84312.1    KRZ18248.1    KRZ42850.1    JYDQ01000015    KRY21604.1    JYDP01000062    KRZ10226.1    JYDI01000104    KRY52491.1    JYDK01000002    KRX85382.1    JYDO01000021    KRZ77240.1    JYDN01000106    KRX57231.1    JYDJ01000002    KRX50966.1    JYDM01000055    KRZ90500.1    JYDH01000051    KRY35679.1    JPKZ01002041    KHN78740.1   

Proteomes

UP000218220    UP000007151    UP000037510    UP000053240    UP000053268    UP000036403    + More
UP000078541    UP000053097    UP000008237    UP000005205    UP000007755    UP000000311    UP000078542    UP000078540    UP000075809    UP000078492    UP000002358    UP000053825    UP000215335    UP000007266    UP000005203    UP000053105    UP000027135    UP000019118    UP000192223    UP000015103    UP000079169    UP000076502    UP000242457    UP000009046    UP000000305    UP000235965    UP000245037    UP000085678    UP000242188    UP000053454    UP000054630    UP000277928    UP000054632    UP000054805    UP000054815    UP000054826    UP000054995    UP000054783    UP000055024    UP000054653    UP000054673    UP000054843    UP000054681    UP000055048    UP000054924    UP000054776    UP000031036   

Pfam

PF01044   Vinculin

Interpro

IPR006077   Vinculin/catenin        + More
IPR036723   Alpha-catenin/vinculin-like_sf       
IPR030045   CTNNAL1       
IPR001033   Alpha_catenin       

SUPFAM

SSF47220   SSF47220       

ProteinModelPortal

A0A2A4JKI0   A0A2A4JLD8   A0A212ESR6   A0A2H1W2Z1   A0A0L7LVK0   A0A194RL35   + More
A0A194PPZ7   A0A0J7LA50   A0A151K0G0   A0A026VSZ5   E2B5J0   A0A158NMD3   F4W708   E2AZV3   A0A195C1U3   A0A195AX89   A0A151X7W8   A0A195DB05   K7IVA9   A0A310SLT4   A0A0L7QRJ2   A0A232F6X7   D6WHX5   A0A087ZXV1   A0A0M8ZWP4   A0A067RP86   N6TVN8   A0A1W4XIY7   A0A139WLL1   T1IXC7   A0A146M499   A0A0A9XDS0   A0A0A9XJ70   A0A0A9XGS7   A0A023F4F3   T1HZG9   A0A3Q0IW29   A0A154P371   A0A2A3EB84   E0VMD4   A0A2S2Q0D0   A0A0T6AYQ5   A0A2H8TWX9   E9GV61   A0A2J7QKU9   A0A2P8Z7D2   A0A2P2I2K4   A0A1S3JDR4   A0A1S3JE76   A0A1S3JF05   V9ILE5   A0A210R5Z0   F1KTV8   A0A0L8GDD3   A0A0V0S2D1   A0A3P6U816   A0A0V0XL88   A0A0V1AAE0   A0A0V1HJL9   A0A0V1CTA9   A0A0V0XBH6   A0A0V1MZM3   A0A0V0V130   A0A0V0UHR1   A0A0V1P2R8   A0A0V1BFM3   A0A0B2VCN7  

PDB

6DV1     E-value=4.81004e-15,     Score=200

KEGG

101741878    no KO assigned | (RefSeq) alpha-catulin

GO

GO:0051015   GO:0007155   GO:0007266   GO:0045296   GO:0016021   GO:0005515   GO:0003774   GO:0005524   GO:0016459   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

PANTHER

PTHR46342  

Length:

670

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.594289999999998

Exp number, first 60 AAs:

0.57139

Total prob of N-in:

0.02686

outside

1  -  670

 

 

Pi

281.982244

Theta

194.985334

Tajima's D

1.325151

CLR

0.17379

CSRT

0.748912554372281

Interpretation

Uncertain