Silkworm Genome Informatics Database

Gene

KWMTBOMO02688

Pre Gene Modal

BGIBMGA003454

Annotation

PREDICTED:_myosin-IIIb-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr5(+):8814373-8827462 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.978

CDS

ATGACATCACAAGACGGGGAAACAAACAAAGCGAATTCCGGAAACAAAGAGAACATAGACACTAATAGAGCAGCTGTCGTTATACAAAGTCATTTCCGTGGGTATACAGCCCGTCGCAAATGGGCGAAGGGACGCGCTCCTCCACCCCCCGCGCACCCGCCACCCGCTGTGCCCTCCACGCCTTCTTCGCCGCACCAACAACTCATGCAACAGTACTCAATTCAGGAACGAGCATCCCAACTACAGACTTTCGCAGAACAAGTCCACAACAAAAACCAAGAAGTCCACAAGAACCTACGTCACAACAAGCCCGGCATCCGGCTACAGTCAGTCCAGCGTCCACCCGAAGAGTACCGAGCGCCACCCGGCTTCACACTCGTTCCATCCATCGTACGAGGACAACCGTCACAAATCGAACAAGACGCCAGCAGACTCTCTAGGTATCAGCAAGTGAGCAACGGACACGAACCAGTCGTGGAAGAACGTCATCGCCAATCGAGTCAGAGCCGGCAGAATTTACCGTGCAGCCGTCAATGCAGCGGCCTCGTCAGCAACAAGATTAGCGAACTGGTCCGGAACTCTCGTAAGGCGGAGCCTCCGAAGCCCGTATACAATATCACTCACGATCCGGAATCAACACTACGAAAGATCCTTCGCAACTCCCCGCAAATACTTGCAACGCCGATGTTCAGTTCTGATGACGATTACACCGAAGGCCCGTTTAGATTTAAACAGCTACTGAGGCCCACACTGGGACCTACGGAGAGCTTGCGGAAGAGAAAGGTGGCGGGCGGCGGAGGCGGAGAGGTGGCCAATGAGGGCGGCGCGGAATATTGCGCGCGCACACGCGCAGTCGCGCCCGCGCCAGCCATGGCGGCCGCCGGCCTGCCTGATCTCGACCTCAGACAGATAAAAACGCGATCCATCGAGAGAACTCTGCTCCCCCTCATTAAACAGATCAGCAATCTCGTGGCGACGCGGAACGAAGCTGCTGGAGGCGGTGCGGCCGTGCAACGAGTGGGCGCCGCTGTCTGCTGCGCCGTGGAGCGCTTCGTGGCCGTCGGCGAGACCATCGCTGACGACAACCCCGATGTGAGGCACAACATGGTACTCGCCTGTAAAGAAGCTAGAGCAGCGGGTAACTATACATAA

Protein

MTSQDGETNKANSGNKENIDTNRAAVVIQSHFRGYTARRKWAKGRAPPPPAHPPPAVPSTPSSPHQQLMQQYSIQERASQLQTFAEQVHNKNQEVHKNLRHNKPGIRLQSVQRPPEEYRAPPGFTLVPSIVRGQPSQIEQDASRLSRYQQVSNGHEPVVEERHRQSSQSRQNLPCSRQCSGLVSNKISELVRNSRKAEPPKPVYNITHDPESTLRKILRNSPQILATPMFSSDDDYTEGPFRFKQLLRPTLGPTESLRKRKVAGGGGGEVANEGGAEYCARTRAVAPAPAMAAAGLPDLDLRQIKTRSIERTLLPLIKQISNLVATRNEAAGGGAAVQRVGAAVCCAVERFVAVGETIADDNPDVRHNMVLACKEARAAGNYT

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.

Uniprot

H9J1R7 A0A2H1W3J1 A0A0L7LG68 A0A1B6DX50

Pubmed

19121390 26227816

EMBL

BABH01008135 BABH01008136 ODYU01005960 SOQ47392.1 JTDY01001257 KOB74379.1 + More
GEDC01007040 JAS30258.1

Proteomes

UP000005204 UP000037510

PRIDE

H9J1R7

Pfam

PF00063   Myosin_head        + More
PF00069   Pkinase
PF00612   IQ

Interpro

IPR011009   Kinase-like_dom_sf        + More
IPR008271   Ser/Thr_kinase_AS
IPR027417   P-loop_NTPase
IPR001609   Myosin_head_motor_dom
IPR017441   Protein_kinase_ATP_BS
IPR036723   Alpha-catenin/vinculin-like_sf
IPR036961   Kinesin_motor_dom_sf
IPR000719   Prot_kinase_dom
IPR000048   IQ_motif_EF-hand-BS
IPR036083   MYSc_Myo3

SUPFAM

SSF56112   SSF56112        + More
SSF52540   SSF52540
SSF47220   SSF47220

Gene 3D

3.40.850.10

CDD

cd01379 MYSc_Myo3

ProteinModelPortal

H9J1R7 A0A2H1W3J1 A0A0L7LG68 A0A1B6DX50

KEGG

101739468 K08834 myosin III [EC:2.7.11.1] | (RefSeq) myosin-IIIb-like

PATHWAY

04745 Phototransduction - fly - Bombyx mori (domestic silkworm)

GO

GO:0051015 GO:0016459 GO:0005524 GO:0003774 GO:0007155 GO:0004672 GO:0003779 GO:0005515 GO:0006631 GO:0006635 GO:0006281 GO:0048384

Length:

383

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00238

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.03543

outside

1 - 383

Pi

205.491128

Theta

191.399092

Tajima's D

0.385697

CLR

0.738262

CSRT

0.478226088695565

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics