SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02686
Pre Gene Modal
BGIBMGA010696
Annotation
NA
Location in the cell
Nuclear   Reliability : 2.36
 

Sequence

CDS
ATGCGTGAGGGCAACGGTGCGACAAAATATTTGGCGAAAAAAGAAGAAAAAAGCCCTATAATCGTGTTCACAAAATCATGCATTAAAAATGCCACGATGTCTAATGTTTCACACCCGAGTGCTCCGAAAGAGGCTTCGTTCAGTAAGAATCCAGATTACACCCCATCTCGAATTCTACAGGATATATCAACCAGTCCACAAAAACTGACTCAAGTGTGTAAATGA
Protein
MREGNGATKYLAKKEEKSPIIVFTKSCIKNATMSNVSHPSAPKEASFSKNPDYTPSRILQDISTSPQKLTQVCK

Summary

Uniprot
Pfam
PF03184   DDE_1        + More
PF05225   HTH_psq
Interpro
IPR009057   Homeobox-like_sf        + More
IPR007889   HTH_Psq       
IPR002219   PE/DAG-bd       
IPR004875   DDE_SF_endonuclease_dom       
SUPFAM
SSF46689   SSF46689       
ProteinModelPortal

Ontologies

Topology

Length:
74
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00161
Exp number, first 60 AAs:
0.00161
Total prob of N-in:
0.61715
inside
1  -  74
 
 

Population Genetic Test Statistics

Pi
352.251277
Theta
199.708274
Tajima's D
2.404265
CLR
0
CSRT
0.935553222338883
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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