SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02677
Annotation
PREDICTED:_uncharacterized_protein_LOC106709000_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 2.789
 

Sequence

CDS
ATGCAATTTTTATACAATACCCCAACGACTGCCGCTACGAAGGCGCCGATCAAAATCCACAAGCCACGAGAAGACCCACGCCTCTTCTATCAATCTGATTTATATCTTCAAGAAGTTAATAGGAAAAATTTAAGCCCAGAACTATCATCAACTTATTTGGGACGAGCGGTTGTTAGAACTGGTGGTGGAAGGGACAGTTCCGCGAAGCCTATTCGGATAAAAACAAGAACAATAAACGAAATTCCCCACGACATCAGCTGCATCAAGTGTCCGCGAGATAGAACGTTGATTGCTAAGGTTGGCGTCAGTAGAGTGATGTTGCAGCCTCCTCGCTTACAGACATGTTCCGGAAGAAAAGCACCTCGAGATTTTAAATTCGTTACCAAGTACGGACCTAAGCTTGGTACTTTAATAGAAAGCGGTGTATACATTATGATCGGTCATATCGTGTACCAAAATCAAATATTGAGGGCTTGTAAAGTGCAAATTCACGTGGTGACTCAGTTTTGTCAAGTTCCAAAATATTTAAATATAAACTGCGACAGAAACCAAAATAGAACGTGCAGTTTTACGTGTCGTGATCCCACTACTGAGCCTACCGGTGCTAATAGTCTCACATGTCGTGATGATTTGAAATGGAATGGCCATTTGCCTTCTTGTAATGTTCGTTCATGGTGTAAACCGCCGTTTCCACCATCTCACGGCCGCATCAGCTGCAATGGAGCAACAGTATCAAGCGGCCGAGGTCTCAAGGGGGGATCGACATCTTTTATGAACTTAACTACGATATCATTAAATAAAACTTACTTAAAACTAATCAGAATCATCGTTGTGAATACAATCACTGCAGAAAAGTACGACATGTTCAGGTGA
Protein
MQFLYNTPTTAATKAPIKIHKPREDPRLFYQSDLYLQEVNRKNLSPELSSTYLGRAVVRTGGGRDSSAKPIRIKTRTINEIPHDISCIKCPRDRTLIAKVGVSRVMLQPPRLQTCSGRKAPRDFKFVTKYGPKLGTLIESGVYIMIGHIVYQNQILRACKVQIHVVTQFCQVPKYLNINCDRNQNRTCSFTCRDPTTEPTGANSLTCRDDLKWNGHLPSCNVRSWCKPPFPPSHGRISCNGATVSSGRGLKGGSTSFMNLTTISLNKTYLKLIRIIVVNTITAEKYDMFR

Summary

Pfam
PF00084   Sushi
Interpro
IPR000436   Sushi_SCR_CCP_dom        + More
IPR035976   Sushi/SCR/CCP_sf       
SUPFAM
SSF57535   SSF57535       

Ontologies

GO

Topology

Length:
290
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.92322
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06338
outside
1  -  290
 
 

Population Genetic Test Statistics

Pi
227.640058
Theta
217.027054
Tajima's D
1.265479
CLR
0.255407
CSRT
0.732613369331533
Interpretation
Uncertain
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