Gene

KWMTBOMO02673

Pre Gene Modal

BGIBMGA003450

Annotation

C-type_lectin_8_[Bombyx_mori]

Location

Bomo_Chr5(+):8611373-8614837      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.698 PlasmaMembrane   Reliability : 1.36

CDS

ATGACTCTCTGGGCAAAGCTAAAAGCCACTACAACAACAAGAAGCTTCAGCGAGTCTCCAGATCATTGGCAAAGAACACGGAAAATGTACCAGGATGTACGCTTCCAGTGTGAAATACGCAAGTCCCAGAAATTCCGCATGGATTACATGTGGGCCCAGATGTTCAAGACGTACTACCGCTTGAACGATCTAGCTACCAACTGGGATCAAGCCAGACAAATATGCGAGGCCGAAGGGACATATTTGTTCATACCGGACTCATTAGATGAAATGGAAAGTTTTAAATTGCTGATGAGCAACATGAAAGCCCAGTATACTGGGATATTTATGGGATTACACGATAAGTTCTCAGACGGAAACTTTGTCACATTAAAAGGAGAATCAATAGCTGGCACAACCATAGAGCTTTTGTGGGCACAGGGTTCTCCTGACAATGTTAATGGCACTGAACACTGTGTTGTGATGACCAGAGAAGGATTGCTGGATGATCGGCCCTGCGATGACATATACCCGTTCGTTTGCAAAATACTTGGAAGTGAAATTGAATTTAACGAAAAGTGCAATAACTTCGATTTGGCATATACACCTAGAAACAACGGAAAATGCTACAAGTTTCACGCAGAGCCCCTATCTTGGTATGACGCATACTTAATCTGCAAGTCCGAAGAAGGAAACTTGGCAATCGTGAATTCGGCAGACGAAGCCGTATTCATAACTGAAATGCTAAGTGAAAACCTTCATAGAAAAGTACCAGACCCCAATATCCTATTTATTGGATTTAGCGACCTGATGTTTCCTTTCCAGTACCGAACGATATTAGGTCAATCACTCGAAGATGCAGGCTATTCCACTTGGGGTCATATTGAGGAACAGACATCAAAGTTAGACTCAAATCATTGTGGAGCCATAACTAGTGAAGGTTTCTTACAAATCACCCGGTGCAACAGACCGGCGATGTTTCTTTGCGAAAAAATAATAAATAACACAGCTGAATAA

Protein

MTLWAKLKATTTTRSFSESPDHWQRTRKMYQDVRFQCEIRKSQKFRMDYMWAQMFKTYYRLNDLATNWDQARQICEAEGTYLFIPDSLDEMESFKLLMSNMKAQYTGIFMGLHDKFSDGNFVTLKGESIAGTTIELLWAQGSPDNVNGTEHCVVMTREGLLDDRPCDDIYPFVCKILGSEIEFNEKCNNFDLAYTPRNNGKCYKFHAEPLSWYDAYLICKSEEGNLAIVNSADEAVFITEMLSENLHRKVPDPNILFIGFSDLMFPFQYRTILGQSLEDAGYSTWGHIEEQTSKLDSNHCGAITSEGFLQITRCNRPAMFLCEKIINNTAE

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

B3IYT2   A0A0L7LRB5   A0A194PUI0   A0A212F5D8   A0A194RL20   B3IYT1   + More
A0A219YXG9   A0A212F8B1   A0A194PJK9   A0A219YXG6   A0A219YXH7   A0A194RCY4   A0A219YXH3   A0A219YXH1   A0A219YXH8   A0A219YXH0   A0A219YXI8   A0A2A4K0G1   A0A219YXH2   Q19AB1   A0A219YXH4   A0A2W1BYL2   A0A219YXK5   I1VR03   A0A194PEZ5   I4DJJ2   A0A2A4J242   S4PJZ4   I1VR05   A0A3G1HH66   A0A2A4J3T7   A0A219YXH5   A0A2A4J280   D2X2F6   A0A194QKT8   A0A194QMK1   A0A096ZGV1   A0A1C9EGM6   A0A3G1HH41   A0A096ZGV2   O97363   A0A2W1BVG4   A0A219YXG7   A0A219YXI4   A0A2W1BZP3   H9IYF4   A0A219YXG8   A0A2A4IYF0   A0A2W1BVD9   A0A212EQ02   A0A219YXI1   B7SVM1   A0A1E1WP12   A0A219YXH6   A0A2W1BTF0   G5CJE6   A0A0N1IPT5   A0A096ZGV0   A0A2A4JYM9   A0A194QAQ3   A0A194RMJ4   A0A219YXI5   A0A2H1WK53   A0A2A4K0C8   A0A219YXI3   Q0KKW8   A0A219YXL1   A0A096ZGV4   R9UPV0   A0A1E1WQ86   H9IYF5   A0A0N1PJ18   A0A0D3M5W6   A0A194QLC9   O96359   A0A173M1W5   A0A2Z5WQ31   A0A0L7LF02   A0A212FF49   A0A194QAQ8   A0A2W1C0J5   C0L7M0   A0A0L7LUC3   A0A194QHR4   A0A2A4JYM8   Q9NBV9   A0A2W1BTE2   A0A194PE23   C0L7M1   A0A2A4JZ93   A0A194PFW3   A0A2D1ATW2   A0A2A4J2P8   Q5UAW8   Q5UAW7   Q5MGF0   A0A2A4IWU7  

Pubmed

26227816    26354079    22118469    17568670    28756777    22516747    + More
22651552    23622113    9310381    9989592    19121390    19033442    9818384    28870445    10954704    15763465    16640722    16023793   

EMBL

AB444138    BAG54785.1    JTDY01000269    KOB77990.1    KQ459597    KPI94795.1    + More
AGBW02010215    OWR48919.1    KQ460207    KPJ16676.1    AB444137    BAG54784.1    KX550120    AQY54437.1    AGBW02009767    OWR49970.1    KQ459602    KPI93512.1    KX550121    AQY54438.1    KX550133    AQY54450.1    KQ460615    KPJ13771.1    KX550128    AQY54445.1    KX550126    AQY54443.1    KX550124    AQY54441.1    KX550127    AQY54444.1    KX550142    AQY54459.1    NWSH01000351    PCG77132.1    KX550125    AQY54442.1    DQ533877    ABF83203.1    KX550130    AQY54447.1    KZ149905    PZC78327.1    KX550129    AQY54446.1    JQ269654    AFI47449.1    KQ459606    KPI91593.1    AK401460    BAM18082.1    NWSH01003594    PCG66071.1    GAIX01004755    JAA87805.1    JQ269656    AFI47451.1    KY111312    AQX37248.1    PCG66072.1    KX550131    AQY54448.1    NWSH01003559    PCG66111.1    GQ487489    ADB12587.1    KQ461198    KPJ06183.1    KPJ06185.1    KF752422    AIR96001.1    KX778610    AON96650.1    KY111311    AQX37247.1    KF752420    AIR95999.1    AJ011573    CAB38429.1    PZC78331.1    KX550123    AQY54440.1    KX550138    AQY54455.1    PZC78330.1    BABH01020449    KX550122    AQY54439.1    NWSH01005098    PCG64438.1    KZ149926    PZC77594.1    AGBW02013342    OWR43573.1    KX550136    AQY54453.1    EU770390    ACI32834.1    GDQN01002397    JAT88657.1    KX550132    AQY54449.1    PZC78329.1    JN133501    AEO52696.1    KQ460044    KPJ18317.1    KF752419    AIR95998.1    PCG77131.1    KQ459232    KPJ02552.1    KQ459984    KPJ19048.1    KX550141    AQY54458.1    ODYU01009180    SOQ53429.1    PCG77130.1    KX550134    AQY54451.1    AB219148    BAF03496.1    KX550139    AQY54456.1    KF752421    AIR96000.1    KC733761    AGN70857.1    GDQN01002063    JAT88991.1    BABH01020450    KPJ18324.1    KF285999    AIC33761.1    KPJ06184.1    AF023275    AAD09286.1    LC150882    BAV01248.1    LC209794    BBC20960.1    JTDY01001404    KOB73959.1    AGBW02008849    OWR52366.1    KPJ02557.1    PZC77593.1    FJ666210    ACN41858.1    JTDY01000107    KOB78821.1    KQ458793    KPJ05052.1    PCG77127.1    AF242202    AAF91316.2    PZC78328.1    KPI91591.1    FJ666211    ACN41859.1    PCG77129.1    KPI91589.1    KX898004    ATG86237.1    NWSH01003419    PCG66335.1    AY768811    AAV41236.1    AY768812    AAV41237.2    AY829836    AAV91450.1    PCG64437.1   

Proteomes

UP000037510    UP000053268    UP000007151    UP000053240    UP000218220    UP000005204    + More

PRIDE

B3IYT2    B3IYT1    D2X2F6    O97363    H9IYF4    Q0KKW8    + More
H9IYF5   

Pfam

PF00059   Lectin_C        + More
PF00153   Mito_carr
PF00293   NUDIX

Interpro

IPR018378   C-type_lectin_CS        + More
IPR016187   CTDL_fold       
IPR016186   C-type_lectin-like/link_sf       
IPR001304   C-type_lectin-like       
IPR036179   Ig-like_dom_sf       
IPR013783   Ig-like_fold       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       
IPR015797   NUDIX_hydrolase-like_dom_sf       
IPR003563   OxG-triPHTase       
IPR000086   NUDIX_hydrolase_dom       

SUPFAM

SSF56436   SSF56436        + More
SSF48726   SSF48726       
SSF103506   SSF103506       
SSF55811   SSF55811       

Gene 3D

3.10.100.10     2.60.40.10     1.50.40.10    

ProteinModelPortal

B3IYT2   A0A0L7LRB5   A0A194PUI0   A0A212F5D8   A0A194RL20   B3IYT1   + More
A0A219YXG9   A0A212F8B1   A0A194PJK9   A0A219YXG6   A0A219YXH7   A0A194RCY4   A0A219YXH3   A0A219YXH1   A0A219YXH8   A0A219YXH0   A0A219YXI8   A0A2A4K0G1   A0A219YXH2   Q19AB1   A0A219YXH4   A0A2W1BYL2   A0A219YXK5   I1VR03   A0A194PEZ5   I4DJJ2   A0A2A4J242   S4PJZ4   I1VR05   A0A3G1HH66   A0A2A4J3T7   A0A219YXH5   A0A2A4J280   D2X2F6   A0A194QKT8   A0A194QMK1   A0A096ZGV1   A0A1C9EGM6   A0A3G1HH41   A0A096ZGV2   O97363   A0A2W1BVG4   A0A219YXG7   A0A219YXI4   A0A2W1BZP3   H9IYF4   A0A219YXG8   A0A2A4IYF0   A0A2W1BVD9   A0A212EQ02   A0A219YXI1   B7SVM1   A0A1E1WP12   A0A219YXH6   A0A2W1BTF0   G5CJE6   A0A0N1IPT5   A0A096ZGV0   A0A2A4JYM9   A0A194QAQ3   A0A194RMJ4   A0A219YXI5   A0A2H1WK53   A0A2A4K0C8   A0A219YXI3   Q0KKW8   A0A219YXL1   A0A096ZGV4   R9UPV0   A0A1E1WQ86   H9IYF5   A0A0N1PJ18   A0A0D3M5W6   A0A194QLC9   O96359   A0A173M1W5   A0A2Z5WQ31   A0A0L7LF02   A0A212FF49   A0A194QAQ8   A0A2W1C0J5   C0L7M0   A0A0L7LUC3   A0A194QHR4   A0A2A4JYM8   Q9NBV9   A0A2W1BTE2   A0A194PE23   C0L7M1   A0A2A4JZ93   A0A194PFW3   A0A2D1ATW2   A0A2A4J2P8   Q5UAW8   Q5UAW7   Q5MGF0   A0A2A4IWU7  

PDB

5EW6     E-value=8.88833e-08,     Score=134

KEGG

101741078    no KO assigned | (RefSeq) BmLEL-2; C-type mannose receptor 2-like

GO

GO:0030246   GO:0022857   GO:0016021   GO:0006281   GO:0008413  

Length:

331

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01216

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03403

outside

1  -  331

 

 

Pi

205.211878

Theta

149.028632

Tajima's D

1.153313

CLR

0.290255

CSRT

0.702614869256537

Interpretation

Uncertain