Gene

KWMTBOMO02672

Pre Gene Modal

BGIBMGA003449

Annotation

PREDICTED:_lachesin_[Bombyx_mori]

Location

Bomo_Chr5(+):8569393-8600146      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.915

CDS

ATGTTCACATGCGTGGTCAATAACCTGGGTGGTTACAGGGTAGCGTGGATCAAGGCGGACACGAAAGCTATACTGGCAATTCATGAGCACGTCATCACGAACAATGCGAGGCTGAGCGTCACACACAACGATTACAACACGTGGACGCTCAATATCAGGGGCGTGAAGCGAGAGGACAGGGGACAATACATGTGCCAAGTCAACACTGACCCTATGAAAATGCAGACTGCGTTTTTAGAAGTGGTCATACCACCGGATATTGTTTATGAAGAGACTTCGGGCGATATGATGGTACCCGAAGGGGGTTCAGCTAAACTAGTCTGCAAAGCTAGAGGCTATCCGCCACCAAAGATCGTCTGGCGTAGAGAGGATGGTGGGGATATTATATCTCGAGGCGGACCGCAAGGAAAAACCAAAGTGACATCACTGGAAGGTGAGATAGTGAATCTAACAAAAGTGACCAGATCAGAGATGGGTGCGTATTTATGCATTGCAGCCAACGGAGTACCTCCTTCTGTCAGCAAAAGAATCATGCTTCACGTTCATTTTCACCCTCTGGTACAAGTGCCAAATCAGCTTGTGGGAGCACCGACCGGCACTGACGTCACGCTACAGTGTCATGTCGAAGCATCGCCCAAAGCCATCAACTACTGGACCAGAGAGAACGGTGAGATGATAATTTCAAATGAAAAATATCACATGAGCGAAATAAATCGTTCCGCATACAGCGTGCAAATGAAACTCGTCATCCGCAACATCCAACGCAGTGATCTTGGGGGATACAAATGTATCTCGAAGAACTCCATAGGTGATGCAGAAGGAAATATAAGGTTATATGAAATGGAACTTCCCAACCGCAAGTCAGGTGATGAAGATGACCGCGATATCTCGTCTGAGGAGTCCAATGATGTACGGTCCGGTCTCCAGGGCCCGCTTCGGGAAGGAGGACCCCGGGCTGAGGATGCCGGCTTCCTGGGAGGGGGTGGGCCGCTCGCAGGCTCCGCGCCTCACACCGCCCCACACGCAATCTTTTTAATATCGGCCTTTGCCCTTGCTGCGTGCTAA

Protein

MFTCVVNNLGGYRVAWIKADTKAILAIHEHVITNNARLSVTHNDYNTWTLNIRGVKREDRGQYMCQVNTDPMKMQTAFLEVVIPPDIVYEETSGDMMVPEGGSAKLVCKARGYPPPKIVWRREDGGDIISRGGPQGKTKVTSLEGEIVNLTKVTRSEMGAYLCIAANGVPPSVSKRIMLHVHFHPLVQVPNQLVGAPTGTDVTLQCHVEASPKAINYWTRENGEMIISNEKYHMSEINRSAYSVQMKLVIRNIQRSDLGGYKCISKNSIGDAEGNIRLYEMELPNRKSGDEDDRDISSEESNDVRSGLQGPLREGGPRAEDAGFLGGGGPLAGSAPHTAPHAIFLISAFALAAC

Uniprot

A0A2A4JLN5   A0A194PPY2   A0A212F5B1   A0A1Y1L5Q2   A0A1Y1L4J8   D6W7P0   + More
A0A139WPH8   A0A139WPG9   A0A1B6MTQ2   H9J1R2   A0A1B6M242   A0A088AH34   A0A195BFJ2   A0A154PDF1   A0A2S2Q9N1   N6UKG2   U4U3R5   A0A1J1IVL5   A0A2H8TUH6   F4X3S1   Q5TQN9   A0A182XYB1   A0A084WFG5   A0A158P039   A0A2S2PES2   E0VGC2   A0A1S4GA51   A0A0L7QQE4   J9K816   Q17DU8   A0A182R254   A0A195CQQ0   A0A151XJB3   A0A182FJW8   A0A336KC27   A0A195F298   E2AYH2   B0WSJ6   A0A3L8DWF9   A0A195E050   W5JWV8   A0A182N0P2   A0A336K2B0   X2JCW3   A0A0A9X241   A0A1W4V934   A0A0M8ZYY9   A0A1I8MS04   B4PZ42   A0A1I8P3Y2   A0A026WP64   A0A0N8NZT0   B7Z153   A0A1W4UVS5   A0A1I8P3U6   A0A0L0BTM0   A0A0Q5TLC4   W8CAW1   A0A0Q5TID2   A0A0R1EEC2   A0A0A9X7J6   A0A0R1ECZ7   A0A1I8P3V2   A0A1I8P3X7   A0A3B0JBE6   A0A0Q9X0Z1   A0A0Q9XQW8   K7IPY4   A0A232F093   A0A1A9X598   A0A139WP49   A0A0M4ETJ3   A0A2S2Q2I9   A0A212FI49   A0A194PUH5   A0A2A4K4N0   A0A182FIH1   B4JME1   A0A182W618   B4MCZ3   A0A1E1W0X2   A0A2H8TMT1   A0A3B0JW51   A0A1W4VT22   B4I164   B3MW76   Q9W4R3   B3NSQ3   B4Q0J2   A0A1I8Q817   A0A0R3P0U2   A0A2A4JL61   B5DNC9   A0A194PP86   A0A2A4JJQ6   A0A0L0C9B6   B4R463  

Pubmed

26354079    22118469    28004739    18362917    19820115    19121390    + More
23537049    21719571    12364791    25244985    24438588    21347285    20566863    17510324    20798317    30249741    20920257    23761445    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25401762    26823975    25315136    17994087    17550304    24508170    26109357    26109356    26108605    24495485    20075255    28648823    26687361    30467080    30688651    15632085   

EMBL

NWSH01001156    PCG72322.1    KQ459597    KPI94794.1    AGBW02010215    OWR48920.1    + More
GEZM01068577    JAV66886.1    GEZM01068578    JAV66885.1    KQ971307    EFA11252.2    KYB29766.1    KYB29767.1    GEBQ01000694    JAT39283.1    BABH01008159    GEBQ01009995    JAT29982.1    KQ976490    KYM83350.1    KQ434879    KZC09936.1    GGMS01005057    MBY74260.1    APGK01020360    KB740193    ENN81126.1    KB631669    ERL85241.1    CVRI01000061    CRL04144.1    GFXV01006128    MBW17933.1    GL888624    EGI58868.1    AAAB01008963    EAL39761.3    ATLV01023347    ATLV01023348    KE525342    KFB48959.1    ADTU01005306    ADTU01005307    ADTU01005308    ADTU01005309    ADTU01005310    ADTU01005311    GGMR01015321    MBY27940.1    DS235135    EEB12428.1    KQ414787    KOC60799.1    ABLF02029059    CH477291    EAT44564.1    KQ977394    KYN03073.1    KQ982074    KYQ60502.1    UFQS01000048    UFQT01000048    SSW98620.1    SSX19006.1    KQ981856    KYN34506.1    GL443910    EFN61507.1    DS232072    EDS33926.1    QOIP01000003    RLU24781.1    KQ979955    KYN18476.1    ADMH02000147    ETN67609.1    SSW98621.1    SSX19007.1    AE014298    AHN59990.1    GBHO01028807    GDHC01011086    JAG14797.1    JAQ07543.1    KQ435794    KOX73965.1    CM000162    EDX03103.2    KK107139    EZA57847.1    CH902622    KPU75180.1    ACL82954.1    ACL82955.1    JRES01001480    KNC22574.1    CH954180    KQS30582.1    GAMC01000994    JAC05562.1    KQS30583.1    KRK07118.1    GBHO01028806    JAG14798.1    KRK07119.1    OUUW01000003    SPP77823.1    CH964239    KRF99545.1    CH933811    KRG06871.1    NNAY01001406    OXU24081.1    KYB29770.1    CP012528    ALC48222.1    GGMS01002687    MBY71890.1    AGBW02008433    OWR53414.1    KPI94790.1    NWSH01000132    PCG79215.1    CH916371    EDV92466.1    CH940660    EDW58065.2    GDQN01010475    JAT80579.1    GFXV01003679    MBW15484.1    OUUW01000011    SPP86305.1    CH480819    EDW53245.1    CH902625    EDV35221.1    BT003528    AAF45880.2    AAO39532.1    AGB95064.1    EDV45733.1    EDX01276.1    CH379064    KRT06852.1    PCG72324.1    EDY72936.1    KPI94793.1    PCG72325.1    JRES01000741    KNC28830.1    CM000366    EDX17005.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000007266    UP000005204    UP000005203    + More
UP000078540    UP000076502    UP000019118    UP000030742    UP000183832    UP000007755    UP000007062    UP000076408    UP000030765    UP000005205    UP000009046    UP000053825    UP000007819    UP000008820    UP000075900    UP000078542    UP000075809    UP000069272    UP000078541    UP000000311    UP000002320    UP000279307    UP000078492    UP000000673    UP000075884    UP000000803    UP000192221    UP000053105    UP000095301    UP000002282    UP000095300    UP000053097    UP000007801    UP000037069    UP000008711    UP000268350    UP000007798    UP000009192    UP000002358    UP000215335    UP000091820    UP000092553    UP000001070    UP000075920    UP000008792    UP000001292    UP000001819    UP000000304   

PRIDE

H9J1R2    X2JCW3    Q9W4R3   

Pfam

PF07679   I-set        + More
PF00047   ig
PF07686   V-set

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2A4JLN5   A0A194PPY2   A0A212F5B1   A0A1Y1L5Q2   A0A1Y1L4J8   D6W7P0   + More
A0A139WPH8   A0A139WPG9   A0A1B6MTQ2   H9J1R2   A0A1B6M242   A0A088AH34   A0A195BFJ2   A0A154PDF1   A0A2S2Q9N1   N6UKG2   U4U3R5   A0A1J1IVL5   A0A2H8TUH6   F4X3S1   Q5TQN9   A0A182XYB1   A0A084WFG5   A0A158P039   A0A2S2PES2   E0VGC2   A0A1S4GA51   A0A0L7QQE4   J9K816   Q17DU8   A0A182R254   A0A195CQQ0   A0A151XJB3   A0A182FJW8   A0A336KC27   A0A195F298   E2AYH2   B0WSJ6   A0A3L8DWF9   A0A195E050   W5JWV8   A0A182N0P2   A0A336K2B0   X2JCW3   A0A0A9X241   A0A1W4V934   A0A0M8ZYY9   A0A1I8MS04   B4PZ42   A0A1I8P3Y2   A0A026WP64   A0A0N8NZT0   B7Z153   A0A1W4UVS5   A0A1I8P3U6   A0A0L0BTM0   A0A0Q5TLC4   W8CAW1   A0A0Q5TID2   A0A0R1EEC2   A0A0A9X7J6   A0A0R1ECZ7   A0A1I8P3V2   A0A1I8P3X7   A0A3B0JBE6   A0A0Q9X0Z1   A0A0Q9XQW8   K7IPY4   A0A232F093   A0A1A9X598   A0A139WP49   A0A0M4ETJ3   A0A2S2Q2I9   A0A212FI49   A0A194PUH5   A0A2A4K4N0   A0A182FIH1   B4JME1   A0A182W618   B4MCZ3   A0A1E1W0X2   A0A2H8TMT1   A0A3B0JW51   A0A1W4VT22   B4I164   B3MW76   Q9W4R3   B3NSQ3   B4Q0J2   A0A1I8Q817   A0A0R3P0U2   A0A2A4JL61   B5DNC9   A0A194PP86   A0A2A4JJQ6   A0A0L0C9B6   B4R463  

PDB

6EFY     E-value=3.44417e-107,     Score=992

KEGG

101742169    no KO assigned | (RefSeq) lachesin

GO

GO:0016021   GO:0050808   GO:0005887   GO:0032589   GO:0005515   GO:0016651   GO:0008270   GO:0006812   GO:0015299   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

354

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.48069

Exp number, first 60 AAs:

0.00161

Total prob of N-in:

0.00953

outside

1  -  354

 

 

Pi

251.164268

Theta

197.946278

Tajima's D

1.252396

CLR

0.372398

CSRT

0.728563571821409

Interpretation

Uncertain