Gene

KWMTBOMO02669

Pre Gene Modal

BGIBMGA003448

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr5(+):8465224-8489626      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.879

CDS

ATGTTAGGATTGGATTCGAAACTCGTCGGTCAAGCATTTCAACCGGAATTTGCTGAGCCATTGATGAATATAACGATACCAGTAGGACGAGATGCTACATTCAGATGCCTTGTACAGAACCTTGGAGGATACAGGGTAGGCTGGGTTAAAGCTGATACAAAGGCCATTCAAGCGATACATGTTCATGTCATAACCAACAACCATAGAGTCGCTGTGTCCCACAACGGGCCAACTGTTTGGAATCTACACATCCGTAGCGTTCAAGAAGAAGATAGAGGCCAATATATGTGTCAAATTAATACAGACCCAATGAAAAGCCAGATAGGTTACTTGGATGTAGTTGTATCACCCGACTTCATAGCGGAAGAAACGTCAGGTGATATTATGGTGCCAGAAGGAGGTACTGCTAGGGTTTCTTGTCGTGCTCGAGGTATGCCAGAGCCACGAGTCATGTGGCGGAGGGAAGATGGGGCTGATATCGTTTTGAGAGAGTCCAACGGCATCAAAACTAAAGTCGCTGTTTATGAAGAAGAAGTACTAACTTTAAACAAAATATCTCGATCAGACATGGGTGCATATTTGTGCATAGCGAGCAACGGCGTCCCGCCTTCTGTGAGCAAGAGAATCATCATAAAAGTTCATTTTCATCCCGTAATTCAAGTTCCAAATCAGCTGATCGGAGCACCTCTAGGCACCGATACTACCCTTGAATGCTACGTCGAGTCATCGCCGAAATCCATAAACTATTGGGTTCGAGATTCCAATGAGATGGTAATATCATCCAGCAAGTACGAAGTGATGAACACAGTTATAAGTTCGTTTGAGAGTCGCATGGCTTTGACTGTCCGAAGATTGACAGAAGAAGATATAGGCGGTTACCGGTGCGTTGCGAAGAATTCTCTGGGCGAAACCGATAGCCTCATTAGGATATATGAAATTCTCGGTCCAACAGTCAGAAACACGAGCCCGGTAACGAGGAGAGGAGACCTCAAGTACTCCACTCCCATAGAAGATCCCGACGAGCAGTTCGGTTCCGCCGAACGCTCTGACGACGAAGACGAGACCACTGACGTCACAGATCGGCTTCAGTACCAGACCAGGAATCGTACAGTACAACACACAACGAATTCGGCACACGAACAAAAACTAAGCAACAAAGTTAGGAAAATTAGCAATAAATTCGAAATTAAATCTGGATTTGAAACGAACAGCTGTTGCCGCGTACATTCCTATAATTTACATATCGCGATACTAGTTTTAAACTTTTATGCTTATAATTGA

Protein

MLGLDSKLVGQAFQPEFAEPLMNITIPVGRDATFRCLVQNLGGYRVGWVKADTKAIQAIHVHVITNNHRVAVSHNGPTVWNLHIRSVQEEDRGQYMCQINTDPMKSQIGYLDVVVSPDFIAEETSGDIMVPEGGTARVSCRARGMPEPRVMWRREDGADIVLRESNGIKTKVAVYEEEVLTLNKISRSDMGAYLCIASNGVPPSVSKRIIIKVHFHPVIQVPNQLIGAPLGTDTTLECYVESSPKSINYWVRDSNEMVISSSKYEVMNTVISSFESRMALTVRRLTEEDIGGYRCVAKNSLGETDSLIRIYEILGPTVRNTSPVTRRGDLKYSTPIEDPDEQFGSAERSDDEDETTDVTDRLQYQTRNRTVQHTTNSAHEQKLSNKVRKISNKFEIKSGFETNSCCRVHSYNLHIAILVLNFYAYN

Uniprot

A0A2A4JL61   A0A1E1W0X2   A0A2A4JJQ6   A0A212F5A5   A0A194RGV6   A0A194PP86   + More
A0A139WP49   A0A182W618   A0A212FI49   A0A194PUH5   A0A182RVN5   A0A182FIH1   A0A2A4K4N0   A0A0M4ETJ3   A0A1I8Q817   B4MCZ3   A0A2S2Q2I9   B4JME1   B4I164   A0A1W4VT22   B3MW76   B3NSQ3   B4Q0J2   Q9W4R3   A0A3B0JW51   A0A0L0C9B6   A0A194RL15   A0A0R3P0U2   B4R463   A0A1J1I9R8   B5DNC9   A0A2H8TMT1   A0A0L7QR22   A0A158P1L0   A0A2A3EME1   A0A151WQF6   E2AQD4   A0A2S2Q9N1   A0A1B6MTQ2   D6W7P0   A0A1Y1L5Q2   A0A3L8DU39   A0A195D114   A0A1B6M242   A0A195BFJ2   A0A026X2K4   A0A2S2PES2   A0A139WPH8   A0A139WPG9   A0A2H8TUH6   A0A1Y1L4J8   A0A154PDF1   A0A212F5B1   Q5TQN9   K7IPY4   A0A194PPY2   Q17DU8   A0A2A4JLN5   A0A088AH34   A0A1S4GA51   A0A0C9RFT1   A0A084WFG5   A0A336KC27   F4X3S1   A0A158P039   E0VGC2   A0A3L8DWF9   A0A1I8MS04   A0A1W4V934   A0A151XJB3   A0A0L7QQE4   A0A1I8P3Y2   B4PZ42   A0A1J1IVL5   X2JCW3   A0A182R254   A0A182FJW8   A0A1D2N219   A0A3B0JBE6   N6UKG2   A0A195CQQ0   A0A0L0BTM0   U4U3R5   A0A1I8P3U6   A0A0N8NZT0   A0A1I8P3X7   A0A0A9X241   A0A1I8P3V2   A0A1W4UVS5   A0A1Y1L333   A0A0Q5TLC4   A0A1Y1KVW7   A0A182XYB1   A0A3Q0JKY0   A0A0R1EEC2  

Pubmed

22118469    26354079    18362917    19820115    17994087    17550304    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26687361    26109357    26109356    30467080    30688651    26108605    15632085    21347285    20798317    28004739    30249741    24508170    12364791    20075255    17510324    24438588    21719571    20566863    25315136    27289101    23537049    25401762    26823975    25244985   

EMBL

NWSH01001156    PCG72324.1    GDQN01010475    JAT80579.1    PCG72325.1    AGBW02010215    + More
OWR48921.1    KQ460207    KPJ16674.1    KQ459597    KPI94793.1    KQ971307    KYB29770.1    AGBW02008433    OWR53414.1    KPI94790.1    NWSH01000132    PCG79215.1    CP012528    ALC48222.1    CH940660    EDW58065.2    GGMS01002687    MBY71890.1    CH916371    EDV92466.1    CH480819    EDW53245.1    CH902625    EDV35221.1    CH954180    EDV45733.1    CM000162    EDX01276.1    AE014298    BT003528    AAF45880.2    AAO39532.1    AGB95064.1    OUUW01000011    SPP86305.1    JRES01000741    KNC28830.1    KPJ16671.1    CH379064    KRT06852.1    CM000366    EDX17005.1    CVRI01000044    CRK96482.1    EDY72936.1    GFXV01003679    MBW15484.1    KQ414784    KOC61077.1    ADTU01006465    ADTU01006466    ADTU01006467    ADTU01006468    ADTU01006469    KZ288210    PBC32973.1    KQ982828    KYQ50129.1    GL441723    EFN64348.1    GGMS01005057    MBY74260.1    GEBQ01000694    JAT39283.1    EFA11252.2    GEZM01068577    JAV66886.1    QOIP01000004    RLU23980.1    KQ976986    KYN06600.1    GEBQ01009995    JAT29982.1    KQ976490    KYM83350.1    KK107024    EZA62236.1    GGMR01015321    MBY27940.1    KYB29766.1    KYB29767.1    GFXV01006128    MBW17933.1    GEZM01068578    JAV66885.1    KQ434879    KZC09936.1    OWR48920.1    AAAB01008963    EAL39761.3    KPI94794.1    CH477291    EAT44564.1    PCG72322.1    GBYB01012002    JAG81769.1    ATLV01023347    ATLV01023348    KE525342    KFB48959.1    UFQS01000048    UFQT01000048    SSW98620.1    SSX19006.1    GL888624    EGI58868.1    ADTU01005306    ADTU01005307    ADTU01005308    ADTU01005309    ADTU01005310    ADTU01005311    DS235135    EEB12428.1    QOIP01000003    RLU24781.1    KQ982074    KYQ60502.1    KQ414787    KOC60799.1    EDX03103.2    CVRI01000061    CRL04144.1    AHN59990.1    LJIJ01000288    ODM99312.1    OUUW01000003    SPP77823.1    APGK01020360    KB740193    ENN81126.1    KQ977394    KYN03073.1    JRES01001480    KNC22574.1    KB631669    ERL85241.1    CH902622    KPU75180.1    GBHO01028807    GDHC01011086    JAG14797.1    JAQ07543.1    GEZM01072482    JAV65507.1    KQS30582.1    GEZM01072485    JAV65504.1    KRK07118.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000007266    UP000075920    + More
UP000075900    UP000069272    UP000092553    UP000095300    UP000008792    UP000001070    UP000001292    UP000192221    UP000007801    UP000008711    UP000002282    UP000000803    UP000268350    UP000037069    UP000001819    UP000000304    UP000183832    UP000053825    UP000005205    UP000242457    UP000075809    UP000000311    UP000279307    UP000078542    UP000078540    UP000053097    UP000076502    UP000007062    UP000002358    UP000008820    UP000005203    UP000030765    UP000007755    UP000009046    UP000095301    UP000094527    UP000019118    UP000030742    UP000076408    UP000079169   

PRIDE

Q9W4R3    X2JCW3   

Pfam

PF07679   I-set        + More
PF00047   ig
PF00194   Carb_anhydrase

Interpro

IPR013098   Ig_I-set        + More
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR013106   Ig_V-set       
IPR013151   Immunoglobulin       
IPR001148   CA_dom       
IPR036398   CA_dom_sf       

SUPFAM

SSF48726   SSF48726        + More
SSF51069   SSF51069       

Gene 3D

2.60.40.10     3.10.200.10    

ProteinModelPortal

A0A2A4JL61   A0A1E1W0X2   A0A2A4JJQ6   A0A212F5A5   A0A194RGV6   A0A194PP86   + More
A0A139WP49   A0A182W618   A0A212FI49   A0A194PUH5   A0A182RVN5   A0A182FIH1   A0A2A4K4N0   A0A0M4ETJ3   A0A1I8Q817   B4MCZ3   A0A2S2Q2I9   B4JME1   B4I164   A0A1W4VT22   B3MW76   B3NSQ3   B4Q0J2   Q9W4R3   A0A3B0JW51   A0A0L0C9B6   A0A194RL15   A0A0R3P0U2   B4R463   A0A1J1I9R8   B5DNC9   A0A2H8TMT1   A0A0L7QR22   A0A158P1L0   A0A2A3EME1   A0A151WQF6   E2AQD4   A0A2S2Q9N1   A0A1B6MTQ2   D6W7P0   A0A1Y1L5Q2   A0A3L8DU39   A0A195D114   A0A1B6M242   A0A195BFJ2   A0A026X2K4   A0A2S2PES2   A0A139WPH8   A0A139WPG9   A0A2H8TUH6   A0A1Y1L4J8   A0A154PDF1   A0A212F5B1   Q5TQN9   K7IPY4   A0A194PPY2   Q17DU8   A0A2A4JLN5   A0A088AH34   A0A1S4GA51   A0A0C9RFT1   A0A084WFG5   A0A336KC27   F4X3S1   A0A158P039   E0VGC2   A0A3L8DWF9   A0A1I8MS04   A0A1W4V934   A0A151XJB3   A0A0L7QQE4   A0A1I8P3Y2   B4PZ42   A0A1J1IVL5   X2JCW3   A0A182R254   A0A182FJW8   A0A1D2N219   A0A3B0JBE6   N6UKG2   A0A195CQQ0   A0A0L0BTM0   U4U3R5   A0A1I8P3U6   A0A0N8NZT0   A0A1I8P3X7   A0A0A9X241   A0A1I8P3V2   A0A1W4UVS5   A0A1Y1L333   A0A0Q5TLC4   A0A1Y1KVW7   A0A182XYB1   A0A3Q0JKY0   A0A0R1EEC2  

PDB

6EFY     E-value=1.61102e-121,     Score=1116

KEGG

101742310    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0032589   GO:0050808   GO:0005887   GO:0005515   GO:0016651   GO:0008270   GO:0006812   GO:0015299   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

426

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.22773

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00123

outside

1  -  426

 

 

Pi

277.85667

Theta

199.761716

Tajima's D

1.542236

CLR

0.412054

CSRT

0.802509874506275

Interpretation

Uncertain