Gene

KWMTBOMO02667

Pre Gene Modal

BGIBMGA003447

Annotation

putative_nadh-ubiquinone_oxidoreductase_ndufs3/30_kDa_subunit_[Operophtera_brumata]

Location

Bomo_Chr5(+):8453284-8454223      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.91

CDS

ATGAACCGTTTTTTCTCGTCTTACAGCAAAAGATCTATCACGTCGATTTTGAGACGTCAATTCCATGCGTCAAATAGGCTCCACTCAGATGACGGCAAACAATCTGTACAAATTGGCAATCCGTTTTGTCTGAAGCCCGTTGAATGCGAGAATCATACGCTCAGGAAACACGACAATTTGAGACGTCAACGACTTTACGAGTTCGGCCTGTACGTTGCCGCTTGTTTACCGAAATACGTCCAGAAGGTGCAGATGCAATTCAACGATCAACTTGAAATACTCATTGTGCCCGATGGCTTGTTCCAAGTGCTGAGTTTCTTGCGCAATCACCAACACGCATGTTGCAACCAGTGTTCCTGCGTAACAGCTATAGACGTTCCGACGAGGCAGTTTCGATTCGAAGTCGTATATTGCCTGCTCAGTATAAGGTTCGGCGAACGAATTCGAGTTAAAACCTACACAGATGAATTAACGCCGCTGCACTCCGCGTGCGAATTGTGGCAAAGCTGCAACTGGTTCGAACGTGAGGTATACGATATGTTTGGTATTGTGTTTACTCATCACCCGGATCTGAGAAGGATTTTAACTGACTATGGATTCGTCGGTCACCCCCTTCGAAAAGATTTTCCATTAATCGGCTACACTGAGGTTCGTTACGATGACGAGCTGAAGAAACTTGTTTATGAGCCCGTCGAGTATGCTCAAGAAATGCGCCGCTATCAACTGGAGTCTCCTTGGAATTACATGAATAACTTTCACGAGGGATACAACAATCCAAAGCCAATAGATAAAAAAAAGAAAAATTAA

Protein

MNRFFSSYSKRSITSILRRQFHASNRLHSDDGKQSVQIGNPFCLKPVECENHTLRKHDNLRRQRLYEFGLYVAACLPKYVQKVQMQFNDQLEILIVPDGLFQVLSFLRNHQHACCNQCSCVTAIDVPTRQFRFEVVYCLLSIRFGERIRVKTYTDELTPLHSACELWQSCNWFEREVYDMFGIVFTHHPDLRRILTDYGFVGHPLRKDFPLIGYTEVRYDDELKKLVYEPVEYAQEMRRYQLESPWNYMNNFHEGYNNPKPIDKKKKN

Similarity

Belongs to the complex I 30 kDa subunit family.

Uniprot

H9J1R0   A0A0L7LJT3   A0A194PN98   A0A194RFT1   A0A2A4JKM0   A0A2H1W1D6   + More
A0A2P8Z6P2   D6WIB0   A0A2J7Q2L7   A0A1Y1NHT9   A0A069DR80   A0A1B6CKI0   A0A0P4VHG1   R4G3D8   A0A183TF12   A0A224XVH4   A0A1B0CFY2   A0A067QGG8   A0A023EME8   B4J350   A0A023ENH9   B4HTK8   B4QP26   A0A182H793   B3NF35   A0A023FZK6   Q9VZU4   A0A232F8X6   R4WDJ1   A0A154PJ38   H9JY65   B4PCU7   A0A0X3PHG6   A0A0K8R728   A0A131Y0A4   A0A3B0JZI3   B4KZY6   A0A1D2N063   Q29E23   A0A1W4W036   A0A3B0JS40   B7QEM6   U5ETX7   B4H416   B3M7D6   V5IA77   A0A087UFX3   A0A1L8E0I2   A0A1B6JRC9   A0A1J1IJC4   A0A1B6ERE2   B4N6C3   A0A1A9WLU0   I4DQE8   A0A1L8EEI5   A0A151MB35   A0A0X3NZG1   A0A3P7LH51   A0A2R5L9V6   B4LFE3   A0A194QXW1   A0A1U7SMX8   F6VZL4   A0A0V0WX39   A0A023FP24   D3TLM6   A0A1B0FB97   A0A1A9XBG8   A0A1B0BHC0   A0A182NJ35   A0A2D0Q665   A0A0P4WIS4   A0A2K5DZI0   A0A2T7NJX9   A0A3L8E095   A0A1L8E0N6   Q4PP92   A0A1A9V4C2   A0A0V1FHA8   A0A0V0Y6L8   A0A182Q115   A0A0R3S1C5   M7BSW8   A0A182WC31   A0A1A9Z6R3   A0A224Z543   A0A131Z581   A0A0L0CJD1   A0A182EEQ1   A0A2K6VJN9   A0A2L2Y3J2   A0A1I8M6J3   A0A226F4B6   A0A384CWH3   A0A1I8PLI3   A0A183IPD3   A0A0V1N4I9   A0A023GKI9   G3MMF8  

Pubmed

19121390    26227816    26354079    29403074    18362917    19820115    + More
28004739    26334808    27129103    24845553    24945155    17994087    22936249    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    28648823    23691247    17550304    27289101    15632085    22651552    22293439    20353571    30249741    23624526    28797301    26830274    26108605    22919073    26561354    25315136    22216098   

EMBL

BABH01008168    JTDY01000866    KOB75624.1    KQ459597    KPI94792.1    KQ460207    + More
KPJ16673.1    NWSH01001156    PCG72326.1    ODYU01005716    SOQ46837.1    PYGN01000172    PSN52161.1    KQ971321    EFA01282.1    NEVH01019369    PNF22819.1    GEZM01001945    JAV97444.1    GBGD01002524    JAC86365.1    GEDC01023376    JAS13922.1    GDKW01002696    JAI53899.1    ACPB03020531    GAHY01002290    JAA75220.1    UYSU01039561    VDM01446.1    GFTR01004313    JAW12113.1    AJWK01010557    KK853475    KDR07346.1    GAPW01003111    JAC10487.1    CH916366    EDV96121.1    GAPW01003112    JAC10486.1    CH480817    EDW50279.1    CM000363    CM002912    EDX09021.1    KMY97270.1    JXUM01027726    KQ560799    KXJ80847.1    CH954178    EDV50377.1    GBBL01000406    JAC26914.1    AE014296    AY118532    BT011342    AAF47723.1    AAM49901.1    AAR96134.1    NNAY01000704    OXU26893.1    AK417748    BAN20963.1    KQ434936    KZC11901.1    BABH01042366    CM000159    EDW93851.1    GEEE01015603    JAP47622.1    GADI01006843    JAA66965.1    GEFM01003858    JAP71938.1    OUUW01000002    SPP76518.1    CH933809    EDW17998.1    LJIJ01000335    ODM98687.1    CH379070    EAL30240.1    SPP76519.1    ABJB010671236    DS921745    EEC17298.1    GANO01002579    JAB57292.1    CH479208    EDW31131.1    CH902618    EDV39834.1    GALX01001665    JAB66801.1    KK119634    KFM76262.1    GFDF01001844    JAV12240.1    GECU01033129    GECU01005936    JAS74577.1    JAT01771.1    CVRI01000051    CRK99644.1    GECZ01029214    JAS40555.1    CH964154    EDW79912.1    AK404078    KQ459598    BAM20138.1    KPI94494.1    GFDG01001689    JAV17110.1    AKHW03006283    KYO21724.1    GEEE01018054    JAP45171.1    UYRU01064796    VDN16134.1    GGLE01002156    MBY06282.1    CH940647    EDW69241.1    KQ460949    KPJ10378.1    JYDK01000043    KRX80272.1    GBBK01001000    JAC23482.1    EZ422328    ADD18604.1    CCAG010014904    JXJN01014257    GDRN01043188    JAI66996.1    PZQS01000012    PVD21469.1    QOIP01000002    RLU26134.1    GFDF01001845    JAV12239.1    DQ062221    AAY63976.1    JYDT01000109    KRY84675.1    JYDU01000052    JYDR01000113    JYDS01000189    JYDS01000080    KRX95765.1    KRY68330.1    KRZ21944.1    KRZ26770.1    AXCN02000458    KB500846    EMP40976.1    GFPF01010114    MAA21260.1    GEDV01001988    JAP86569.1    JRES01000318    KNC32356.1    UYRW01002072    VDK82853.1    CMVM020000003    IAAA01005299    IAAA01005300    LAA01870.1    LNIX01000001    OXA64635.1    UZAM01009024    VDP07358.1    JYDO01000009    KRZ78907.1    GBBM01002123    JAC33295.1    JO843059    AEO34676.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000218220    UP000245037    + More
UP000007266    UP000235965    UP000015103    UP000050788    UP000275846    UP000092461    UP000027135    UP000001070    UP000001292    UP000000304    UP000069940    UP000249989    UP000008711    UP000000803    UP000215335    UP000076502    UP000002282    UP000268350    UP000009192    UP000094527    UP000001819    UP000192221    UP000001555    UP000008744    UP000007801    UP000054359    UP000183832    UP000007798    UP000091820    UP000050525    UP000008792    UP000189705    UP000008225    UP000054673    UP000092444    UP000092443    UP000092460    UP000075884    UP000221080    UP000233020    UP000245119    UP000279307    UP000078200    UP000054995    UP000054632    UP000054805    UP000054815    UP000075886    UP000050640    UP000031443    UP000075920    UP000092445    UP000037069    UP000077448    UP000271087    UP000024404    UP000095301    UP000198287    UP000261680    UP000095300    UP000050793    UP000054843   

PRIDE

H9J1R0    H9JY65   

Pfam

PF00329   Complex1_30kDa

Interpro

IPR001268   NADH_UbQ_OxRdtase_30kDa_su        + More
IPR037232   NADH_quin_OxRdtase_su_C/D-like       
IPR010218   NADH_DH_suC       
IPR020396   NADH_UbQ_OxRdtase_CS       

SUPFAM

SSF143243   SSF143243       

Gene 3D

3.30.460.80    

ProteinModelPortal

H9J1R0   A0A0L7LJT3   A0A194PN98   A0A194RFT1   A0A2A4JKM0   A0A2H1W1D6   + More
A0A2P8Z6P2   D6WIB0   A0A2J7Q2L7   A0A1Y1NHT9   A0A069DR80   A0A1B6CKI0   A0A0P4VHG1   R4G3D8   A0A183TF12   A0A224XVH4   A0A1B0CFY2   A0A067QGG8   A0A023EME8   B4J350   A0A023ENH9   B4HTK8   B4QP26   A0A182H793   B3NF35   A0A023FZK6   Q9VZU4   A0A232F8X6   R4WDJ1   A0A154PJ38   H9JY65   B4PCU7   A0A0X3PHG6   A0A0K8R728   A0A131Y0A4   A0A3B0JZI3   B4KZY6   A0A1D2N063   Q29E23   A0A1W4W036   A0A3B0JS40   B7QEM6   U5ETX7   B4H416   B3M7D6   V5IA77   A0A087UFX3   A0A1L8E0I2   A0A1B6JRC9   A0A1J1IJC4   A0A1B6ERE2   B4N6C3   A0A1A9WLU0   I4DQE8   A0A1L8EEI5   A0A151MB35   A0A0X3NZG1   A0A3P7LH51   A0A2R5L9V6   B4LFE3   A0A194QXW1   A0A1U7SMX8   F6VZL4   A0A0V0WX39   A0A023FP24   D3TLM6   A0A1B0FB97   A0A1A9XBG8   A0A1B0BHC0   A0A182NJ35   A0A2D0Q665   A0A0P4WIS4   A0A2K5DZI0   A0A2T7NJX9   A0A3L8E095   A0A1L8E0N6   Q4PP92   A0A1A9V4C2   A0A0V1FHA8   A0A0V0Y6L8   A0A182Q115   A0A0R3S1C5   M7BSW8   A0A182WC31   A0A1A9Z6R3   A0A224Z543   A0A131Z581   A0A0L0CJD1   A0A182EEQ1   A0A2K6VJN9   A0A2L2Y3J2   A0A1I8M6J3   A0A226F4B6   A0A384CWH3   A0A1I8PLI3   A0A183IPD3   A0A0V1N4I9   A0A023GKI9   G3MMF8  

PDB

5GUP     E-value=6.7296e-68,     Score=651

KEGG

101741361    K03936 NADH dehydrogenase (ubiquinone) Fe-S protein 3 [EC:7.1.1.2 1.6.99.3] | (RefSeq) NADH dehydrog

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0008137   GO:0005747   GO:0072593   GO:0003954   GO:0005739   GO:0030308   GO:0016604   GO:2001243   GO:0016021   GO:0008340   GO:0016651   GO:0008270   GO:0006812   GO:0015299   GO:0006631   GO:0006635   GO:0006281   GO:0048384   GO:0055114  

Length:

268

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0463

Exp number, first 60 AAs:

1e-05

Total prob of N-in:

0.09118

outside

1  -  268

 

 

Pi

29.289915

Theta

25.325718

Tajima's D

0.479842

CLR

2.42959

CSRT

0.51602419879006

Interpretation

Uncertain