Gene

KWMTBOMO02663

Pre Gene Modal

BGIBMGA003749

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr5(-):8277626-8331693      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.848 Nuclear   Reliability : 1.516

CDS

ATGAAAAGTCAAATGGGCTTCCTAGACGTAGTAATTCCTCCTGACTTTATACCTGAAGAAACGTCAGGGGACACCATGGTGCCCGAGGGAGGTACTGCAAGGGTGTCCTGCAAAGCACGAGGTGTTCCGCCTCCACGGGTGATGTGGAAAAGAGAGGACGGACAGGAAATCGTTGTGCGGGACCAGACTGGAGCAAAAACTAAAGGTAAATTTCATATATTGAACACTTCCAGAAATACAAAAAAATAA

Protein

MKSQMGFLDVVIPPDFIPEETSGDTMVPEGGTARVSCKARGVPPPRVMWKREDGQEIVVRDQTGAKTKGKFHILNTSRNTKK

Uniprot

H9J2L2   A0A2H1WU64   A0A2A4K4N0   A0A194PUH5   A0A212FI49   A0A2A4JJQ6   + More
A0A2A4JL61   A0A0L7LKE7   A0A2H1W1K5   A0A1E1W0X2   H9J1R1   J9JRV5   A0A139WP49   E0VAF5   A0A067R3Q2   B4JME1   A0A1I8MHH7   A0A194RGV6   A0A194PP86   A0A212F5A5   A0A0L0C9B6   A0A1A9W1Y0   A0A1I8Q817   A0A182XYB1   A0A2P8YRY8   A0A2S2Q2I9   A0A2H8TMT1   A0A2P8XB09   A0A3L8DWF9   A0A0L7LS06   N6UIK1   A0A0L0BTM0   A0A1B0FFM0   A0A026WP64   A0A1I8P3Y2   B4H0U2   A0A1Y1L5Q2   A0A1W4VT22   A0A1I8MS04   A0A067R9I7   A0A1I8P3X7   A0A1I8P3V2   A0A0M4ETJ3   B3MW76   B3NSQ3   A0A1I8P3U6   Q9W4R3   A0A182MII5   A0A182RVN5   B4I164   A0A195F298   B4Q0J2   A0A182W618   A0A195E050   A0A3B0JW51   M9PGE1   B4MCZ3   A0A195CQQ0   A0A0R3P0U2   B4R463   B5DNC9   A0A1J1I9R8   A0A182SCE4   A0A182HBM4   B4NPW7   A0A2R7WK93   A0A182PAT7   A0A1B6M242   A0A1B6MTQ2   A0A182VVF9   A0A2S2Q9N1   A0A2P8ZE78   A0A182N0P2   A0A1B0D7N6   Q5TQN9   A0A1A9UHN8   A0A182WZ95   J9K816   A0A2H8TUH6   A0A2C9GQ43   A0A1S4GA51   A0A182ULY5   B0WSJ6   A0A336K2B0   A0A336KC27   A0A182TR57   E2B5A4   A0A1B0CRC5   A0A194RH74   A0A084WFG5   A0A182R254   K7IPY4   A0A182FIH1   A0A182FJW8   A0A1B6L2P2   A0A1J1IVL5   Q17DU8   E2AYH2   A0A2H1WEZ1  

Pubmed

19121390    26354079    22118469    26227816    18362917    19820115    + More
20566863    24845553    17994087    25315136    26108605    25244985    29403074    30249741    23537049    24508170    28004739    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26687361    26109357    26109356    30467080    30688651    17550304    15632085    26483478    12364791    20798317    24438588    20075255    17510324   

EMBL

BABH01008174    ODYU01011088    SOQ56605.1    NWSH01000132    PCG79215.1    KQ459597    + More
KPI94790.1    AGBW02008433    OWR53414.1    NWSH01001156    PCG72325.1    PCG72324.1    JTDY01000798    KOB75839.1    ODYU01005716    SOQ46836.1    GDQN01010475    JAT80579.1    BABH01008165    ABLF02039546    ABLF02039548    ABLF02039558    ABLF02039559    ABLF02039563    ABLF02039572    ABLF02039575    KQ971307    KYB29770.1    DS235006    EEB10361.1    KK852725    KDR17668.1    CH916371    EDV92466.1    KQ460207    KPJ16674.1    KPI94793.1    AGBW02010215    OWR48921.1    JRES01000741    KNC28830.1    PYGN01000401    PSN46994.1    GGMS01002687    MBY71890.1    GFXV01003679    MBW15484.1    PYGN01005702    PSN29181.1    QOIP01000003    RLU24781.1    JTDY01000269    KOB77991.1    APGK01034033    APGK01034034    KB740901    ENN78472.1    JRES01001480    KNC22574.1    CCAG010008667    CCAG010008668    KK107139    EZA57847.1    CH479201    EDW30007.1    GEZM01068577    JAV66886.1    KK852607    KDR20347.1    CP012528    ALC48222.1    CH902625    EDV35221.1    CH954180    EDV45733.1    AE014298    BT003528    AAF45880.2    AAO39532.1    AGB95064.1    AXCM01001408    CH480819    EDW53245.1    KQ981856    KYN34506.1    CM000162    EDX01276.1    KQ979955    KYN18476.1    OUUW01000011    SPP86305.1    AGB95063.1    CH940660    EDW58065.2    KQ977394    KYN03073.1    CH379064    KRT06852.1    CM000366    EDX17005.1    EDY72936.1    CVRI01000044    CRK96482.1    JXUM01125309    JXUM01125310    JXUM01125311    KQ566931    KXJ69721.1    CH964291    EDW86192.2    KK854975    PTY20064.1    GEBQ01009995    JAT29982.1    GEBQ01000694    JAT39283.1    GGMS01005057    MBY74260.1    PYGN01000084    PSN54760.1    AJVK01012472    AJVK01012473    AAAB01008963    EAL39761.3    ABLF02029059    GFXV01006128    MBW17933.1    APCN01004867    DS232072    EDS33926.1    UFQS01000048    UFQT01000048    SSW98621.1    SSX19007.1    SSW98620.1    SSX19006.1    GL445761    EFN89131.1    AJWK01024595    AJWK01024596    AJWK01024597    KPJ16675.1    ATLV01023347    ATLV01023348    KE525342    KFB48959.1    GEBQ01022000    JAT17977.1    CVRI01000061    CRL04144.1    CH477291    EAT44564.1    GL443910    EFN61507.1    ODYU01008214    SOQ51621.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000037510    UP000007819    + More
UP000007266    UP000009046    UP000027135    UP000001070    UP000095301    UP000053240    UP000037069    UP000091820    UP000095300    UP000076408    UP000245037    UP000279307    UP000019118    UP000092444    UP000053097    UP000008744    UP000192221    UP000092553    UP000007801    UP000008711    UP000000803    UP000075883    UP000075900    UP000001292    UP000078541    UP000002282    UP000075920    UP000078492    UP000268350    UP000008792    UP000078542    UP000001819    UP000000304    UP000183832    UP000075901    UP000069940    UP000249989    UP000007798    UP000075885    UP000075884    UP000092462    UP000007062    UP000078200    UP000076407    UP000075840    UP000075903    UP000002320    UP000075902    UP000008237    UP000092461    UP000030765    UP000002358    UP000069272    UP000008820    UP000000311   

PRIDE

H9J2L2    H9J1R1    Q9W4R3    M9PGE1   

Pfam

PF07679   I-set        + More
PF11467   LEDGF
PF00047   ig

Interpro

IPR013098   Ig_I-set        + More
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR003598   Ig_sub2       
IPR013106   Ig_V-set       
IPR035441   TFIIS/LEDGF_dom_sf       
IPR021567   LEDGF_IBD       
IPR036218   HIVI-bd_sf       
IPR013151   Immunoglobulin       

SUPFAM

SSF48726   SSF48726        + More
SSF140576   SSF140576       

Gene 3D

2.60.40.10     1.20.930.10    

ProteinModelPortal

H9J2L2   A0A2H1WU64   A0A2A4K4N0   A0A194PUH5   A0A212FI49   A0A2A4JJQ6   + More
A0A2A4JL61   A0A0L7LKE7   A0A2H1W1K5   A0A1E1W0X2   H9J1R1   J9JRV5   A0A139WP49   E0VAF5   A0A067R3Q2   B4JME1   A0A1I8MHH7   A0A194RGV6   A0A194PP86   A0A212F5A5   A0A0L0C9B6   A0A1A9W1Y0   A0A1I8Q817   A0A182XYB1   A0A2P8YRY8   A0A2S2Q2I9   A0A2H8TMT1   A0A2P8XB09   A0A3L8DWF9   A0A0L7LS06   N6UIK1   A0A0L0BTM0   A0A1B0FFM0   A0A026WP64   A0A1I8P3Y2   B4H0U2   A0A1Y1L5Q2   A0A1W4VT22   A0A1I8MS04   A0A067R9I7   A0A1I8P3X7   A0A1I8P3V2   A0A0M4ETJ3   B3MW76   B3NSQ3   A0A1I8P3U6   Q9W4R3   A0A182MII5   A0A182RVN5   B4I164   A0A195F298   B4Q0J2   A0A182W618   A0A195E050   A0A3B0JW51   M9PGE1   B4MCZ3   A0A195CQQ0   A0A0R3P0U2   B4R463   B5DNC9   A0A1J1I9R8   A0A182SCE4   A0A182HBM4   B4NPW7   A0A2R7WK93   A0A182PAT7   A0A1B6M242   A0A1B6MTQ2   A0A182VVF9   A0A2S2Q9N1   A0A2P8ZE78   A0A182N0P2   A0A1B0D7N6   Q5TQN9   A0A1A9UHN8   A0A182WZ95   J9K816   A0A2H8TUH6   A0A2C9GQ43   A0A1S4GA51   A0A182ULY5   B0WSJ6   A0A336K2B0   A0A336KC27   A0A182TR57   E2B5A4   A0A1B0CRC5   A0A194RH74   A0A084WFG5   A0A182R254   K7IPY4   A0A182FIH1   A0A182FJW8   A0A1B6L2P2   A0A1J1IVL5   Q17DU8   E2AYH2   A0A2H1WEZ1  

PDB

6EFY     E-value=4.58108e-22,     Score=251

KEGG

101742463    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0050808   GO:0032589   GO:0005887   GO:0005515   GO:0016051   GO:0008270   GO:0006812   GO:0015299   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

82

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.26477

outside

1  -  82

 

 

Pi

278.633202

Theta

190.816388

Tajima's D

1.326215

CLR

0.156589

CSRT

0.742012899355032

Interpretation

Uncertain