Silkworm Genome Informatics Database

Gene

KWMTBOMO02661

Pre Gene Modal

BGIBMGA003750

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr5(-):8263141-8266453 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.215

CDS

ATGTCTGTACGTCAGAAGTCCATGTTCGAAGCCGAAATGAGAATGACGATAAAAAATATACGACGCGAAGACTTGGGAAGCTACATTTGTGTCGCGAAAAACTCGCTCGGCGATGTCGAGAGCAAAATAAGGTTATATGAAATACCAGGGAATGATAGACATTCGTACCATTACCCTGAGGTTCGGGTACCGACCGAGGACGACTACGGCACCGACAGCTATGACGATATGGAAGTCGAGGACAACGACAGCACTAAAACGAATAGGGTACCAGACCACGCCAATAAATGGTACGCTAATGACGGAAAGGTAATCGTTTCACAGTCCAACGATGCGTTCAAACCAACACCGTCATTCCTGACAATCATAACGATCTTCCTACTTCACAATAATCCAGTATAA

Protein

MSVRQKSMFEAEMRMTIKNIRREDLGSYICVAKNSLGDVESKIRLYEIPGNDRHSYHYPEVRVPTEDDYGTDSYDDMEVEDNDSTKTNRVPDHANKWYANDGKVIVSQSNDAFKPTPSFLTIITIFLLHNNPV

Uniprot

H9J2L3 A0A194PUH5 A0A2A4K4N0 A0A194RL15 A0A2H1X099 A0A212FI49 + More
A0A0L7LHJ0 A0A182GCH2 A0A1B0CRC5 B0XK23 A0A182H5G2 A0A194PPY2 E2AQD4 A0A087TJI0 A0A1E1W0X2

Pubmed

19121390 26354079 22118469 26227816 26483478 20798317 + More

EMBL

BABH01008175 KQ459597 KPI94790.1 NWSH01000132 PCG79215.1 KQ460207 + More
KPJ16671.1 ODYU01012414 SOQ58707.1 AGBW02008433 OWR53414.1 JTDY01001086 KOB74922.1 JXUM01054226 KQ561811 KXJ77453.1 AJWK01024595 AJWK01024596 AJWK01024597 DS233679 EDS31102.1 JXUM01111613 JXUM01111614 JXUM01111615 JXUM01111616 KQ565521 KXJ70905.1 KPI94794.1 GL441723 EFN64348.1 KK115496 KFM65269.1 GDQN01010475 JAT80579.1

Proteomes

UP000005204 UP000053268 UP000218220 UP000053240 UP000007151 UP000037510 + More
UP000069940 UP000249989 UP000092461 UP000002320 UP000000311 UP000054359

PRIDE

H9J2L3

Pfam

PF07679 I-set + More
PF00047 ig

Interpro

IPR013783   Ig-like_fold        + More
IPR003599   Ig_sub
IPR007110   Ig-like_dom
IPR013098   Ig_I-set
IPR036179   Ig-like_dom_sf
IPR003598   Ig_sub2
IPR013106   Ig_V-set
IPR013151   Immunoglobulin

SUPFAM

SSF48726 SSF48726

Gene 3D

2.60.40.10

ProteinModelPortal

H9J2L3 A0A194PUH5 A0A2A4K4N0 A0A194RL15 A0A2H1X099 A0A212FI49 + More
A0A0L7LHJ0 A0A182GCH2 A0A1B0CRC5 B0XK23 A0A182H5G2 A0A194PPY2 E2AQD4 A0A087TJI0 A0A1E1W0X2

PDB

6EFY E-value=4.65634e-10, Score=148

KEGG

101742463 no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021 GO:0005515 GO:0016051 GO:0008270 GO:0006812 GO:0015299 GO:0006631 GO:0006635 GO:0006281 GO:0048384

Length:

133

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.09151

Exp number, first 60 AAs:

0

Total prob of N-in:

0.25112

outside

1 - 133

Pi

278.390507

Theta

180.349747

Tajima's D

1.962997

CLR

0.522013

CSRT

0.87755612219389

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics