Gene
KWMTBOMO02658
Annotation
PREDICTED:_snurportin-1_[Amyelois_transitella]
Full name
Snurportin-1
Alternative Name
RNA U transporter 1
Location in the cell
Cytoplasmic Reliability : 1.487 Nuclear Reliability : 1.613
Sequence
CDS
ATGGATGATATTATACAAAAAATAGCTTCTACTGCAATCCATTTCGAGGATAAGGATGCCAGTAAAACCATGTTTAAAGACCTTTACAAAAATAGAGAAAAGAGTAATAACCAAGAAGAGAGACGAAAAAAAATGCTGGAAGTTCAAAAGTGTAACCGCAATGCTACCACAGACACATTTAGGGGCATATTAGACATTGTAAATAGTGTCGACACAACAGAAGATTATTTTGGTTCTACAACACAGACTTACTATAGACCGAATATATATGTTGCAGGCTTTGTTAAAGCCCCATCATCATACTATAATGTATTGATGATTTCTGAATGGATGGTAGAAAAACCCTCTGATTTTGCTCAGAATTGGTATGTTGTACCATGTCCAAAAGGTAGTAGAGTGTTGATTGTTGCTAATAATGGTAGAACCAAATTATATAATAAGTATGGAAGATTTAGATTAGATACTAAAACTCTGCTGCCGGGTGGCCATCCTAATAAAGGATATCAGAAAACTGATTGCTGTGTTCTAGATGGTTTTTATGATTCTCTATCGAATAGTGTTTACATTCTTGATTTACTGGCATGGAATAATCAGGCCATGACTGATGGAGAGACTGATTTTCGACATTTTTGGCTACAAACTCAAGTTTTTATAATACAGGGACTGAACGTACTTAGCAAGGTCAATAAGTTAAAATTTTTTTTACTACCCAAGGTACCTTGTTCCCGTGAAGAATTAAACCAGTTCATGATGACATATCCAGCATTTGAAAATTACATACCAGCACTAGATGGTCTATTATTCTATCACAAAAAGACCCATTACATCTCAGGACAGACTCCACTGGTTGGATGGCTGTATCCATTCATGGTAAAAGAAGTACTTGGATATGACATAACCGTTCACGAGTCGTATAATTTAGAGCGACCCGAAGATTATACAAATCAAGCAGATTACATCGTTCGGTTCGAAGAGAGAAAGACGAGGACCAAACAAAGTAAACTAGATAGACTGAGGATCACTCAAATGCAGATTGGTGACTACGAATCGGGCGAAACATATTATTCCAGACTGTACAACATGGACGTCGGCGACTGTAATAACGAGGTACAACACCAAACCATACTTAAAGACAGATTTGGCCTCGTGGTTATGAGTTAG
Protein
MDDIIQKIASTAIHFEDKDASKTMFKDLYKNREKSNNQEERRKKMLEVQKCNRNATTDTFRGILDIVNSVDTTEDYFGSTTQTYYRPNIYVAGFVKAPSSYYNVLMISEWMVEKPSDFAQNWYVVPCPKGSRVLIVANNGRTKLYNKYGRFRLDTKTLLPGGHPNKGYQKTDCCVLDGFYDSLSNSVYILDLLAWNNQAMTDGETDFRHFWLQTQVFIIQGLNVLSKVNKLKFFLLPKVPCSREELNQFMMTYPAFENYIPALDGLLFYHKKTHYISGQTPLVGWLYPFMVKEVLGYDITVHESYNLERPEDYTNQADYIVRFEERKTRTKQSKLDRLRITQMQIGDYESGETYYSRLYNMDVGDCNNEVQHQTILKDRFGLVVMS
Summary
Description
Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs.
Subunit
Component of an import snRNP complex composed of KPNB1, SNUPN, SMN1 and ZNF259. Component of a nuclear export receptor complex composed of KPNB1, Ran, SNUPN and XPO1. Found in a trimeric export complex with SNUPN, Ran and XPO1. Interacts (via IBB domain) with KPNB1; the interaction is direct. Interacts with DDX20, IPO7, SMN1, SNRPB and XPO1. Interacts directly with XPO1. Its interaction with XPO1 and binding to m3G-cap U snRNPs appears to be mutually exclusive.
Similarity
Belongs to the snurportin family.
Keywords
Acetylation
Complete proteome
Cytoplasm
Nucleus
Phosphoprotein
Reference proteome
RNA-binding
Transport
3D-structure
Direct protein sequencing
Feature
chain Snurportin-1
Uniprot
A0A1E1W629
A0A212F3P0
A0A2A4K620
A0A2H1WWD1
A0A194PN93
A0A194RGV1
+ More
A0A286XZ28 G1SVX5 A0A2Y9HIU7 A0A250YGF2 E2RL29 A0A2U3YLA0 G3SU83 A0A2I2U2N7 A0A2U3YLN3 A0A2C9JQV0 D2HRJ8 A0A2K6GJ74 G1LNW2 A0A2J7RE89 A0A384DI61 A0A2U3WGK1 A0A067QSF5 A0A091E5F6 A0A2U3WGK3 L7M0W0 A0A1S3ESQ6 Q80W37 A0A2U3ZPE1 K9K3S2 A0A0K8V140 Q68FP5 L5JVK4 W5NV98 K9IJ54 A0A0P6K888 F1SJ73 A0A2K5N7X8 A0A1U7TLZ4 A0A1U8BLH0 A0A0D9RPX3 M7ARF9 O95149 H9FND9 A0A2K6RII2 F7CUM4 A0A2R9AYD3 A0A2J8KS94 A0A2Y9R1Y1 A0A2Y9QU47 G2HET3 A0A2K6M1C0 Q7ZYM4 G9KQG5 M3Z0V2 A0A1L8DGB2 A0A2Y9NP54 B3KNP2 A0A2Y9KE09 I3M6X2 Q2TBK8 A0A2J8UDQ5 A0A293LEZ5 A0A2K6TZZ8 A0A1S2ZWT4 G1QFG9 K7CPC7 A0A2Y9K316 A0A2U3V1V0 L8ISB6 A0A340Y9X2 T1HKK1 A0A2K5PGP9 U3C196 A0A0K8RR08 U6DAI9 A0A131Y8R0 A0A1E1XLW5 K7GA50 K7GA73 A0A2R5LA18 A0A341CS82 A0A2Y9FAV2 G1Q2I2 A0A2K5D360 A0A0D9SD17 A0A384BEM8 A0A224Z910 W5ND32 A0A1B0CLM2 B7PK22 A0A336LV04 A0A2K5I7V9 S7NBF9 A0A3P4Q0N3 A0A131YNZ9 A0A3B4EK03
A0A286XZ28 G1SVX5 A0A2Y9HIU7 A0A250YGF2 E2RL29 A0A2U3YLA0 G3SU83 A0A2I2U2N7 A0A2U3YLN3 A0A2C9JQV0 D2HRJ8 A0A2K6GJ74 G1LNW2 A0A2J7RE89 A0A384DI61 A0A2U3WGK1 A0A067QSF5 A0A091E5F6 A0A2U3WGK3 L7M0W0 A0A1S3ESQ6 Q80W37 A0A2U3ZPE1 K9K3S2 A0A0K8V140 Q68FP5 L5JVK4 W5NV98 K9IJ54 A0A0P6K888 F1SJ73 A0A2K5N7X8 A0A1U7TLZ4 A0A1U8BLH0 A0A0D9RPX3 M7ARF9 O95149 H9FND9 A0A2K6RII2 F7CUM4 A0A2R9AYD3 A0A2J8KS94 A0A2Y9R1Y1 A0A2Y9QU47 G2HET3 A0A2K6M1C0 Q7ZYM4 G9KQG5 M3Z0V2 A0A1L8DGB2 A0A2Y9NP54 B3KNP2 A0A2Y9KE09 I3M6X2 Q2TBK8 A0A2J8UDQ5 A0A293LEZ5 A0A2K6TZZ8 A0A1S2ZWT4 G1QFG9 K7CPC7 A0A2Y9K316 A0A2U3V1V0 L8ISB6 A0A340Y9X2 T1HKK1 A0A2K5PGP9 U3C196 A0A0K8RR08 U6DAI9 A0A131Y8R0 A0A1E1XLW5 K7GA50 K7GA73 A0A2R5LA18 A0A341CS82 A0A2Y9FAV2 G1Q2I2 A0A2K5D360 A0A0D9SD17 A0A384BEM8 A0A224Z910 W5ND32 A0A1B0CLM2 B7PK22 A0A336LV04 A0A2K5I7V9 S7NBF9 A0A3P4Q0N3 A0A131YNZ9 A0A3B4EK03
Pubmed
22118469
26354079
21993624
28087693
16341006
17975172
+ More
15562597 20010809 24813606 24845553 25576852 16141072 15489334 19892987 23258410 20809919 23624526 9670026 14702039 10209022 12095920 16030253 18669648 20068231 21269460 21406692 23186163 15920472 18187419 20476751 17431167 25319552 25362486 17495919 22722832 16136131 21484476 27762356 23236062 22751099 25243066 29209593 17381049 28797301 26830274
15562597 20010809 24813606 24845553 25576852 16141072 15489334 19892987 23258410 20809919 23624526 9670026 14702039 10209022 12095920 16030253 18669648 20068231 21269460 21406692 23186163 15920472 18187419 20476751 17431167 25319552 25362486 17495919 22722832 16136131 21484476 27762356 23236062 22751099 25243066 29209593 17381049 28797301 26830274
EMBL
GDQN01008616
JAT82438.1
AGBW02010519
OWR48356.1
NWSH01000132
PCG79213.1
+ More
ODYU01011558 SOQ57370.1 KQ459597 KPI94787.1 KQ460207 KPJ16669.1 AAKN02050765 GFFW01002061 JAV42727.1 AAEX03016332 AAEX03016333 AANG04001761 GL193224 EFB18985.1 ACTA01059787 NEVH01005277 PNF39145.1 KK852989 KDR12791.1 KN120660 KFO37968.1 GACK01007068 JAA57966.1 AK155315 BC049638 BC061258 JL615911 AEH58118.1 GDHF01020029 GDHF01018456 JAI32285.1 JAI33858.1 BC079451 KB031080 ELK03469.1 AMGL01041947 GABZ01006687 JAA46838.1 GEBF01000724 JAO02909.1 AEMK02000056 AQIB01139464 KB572555 EMP27224.1 AF039029 CR456811 AK289475 CH471136 BC004203 JSUE03038753 JSUE03038754 JSUE03038755 JU332393 JU473849 AFE76148.1 AFH30653.1 AJFE02064782 AJFE02064783 AJFE02064784 GABC01007093 NBAG03000345 JAA04245.1 PNI37896.1 AACZ04060370 AK305247 GABF01007439 GABD01006216 BAK62241.1 JAA14706.1 JAA26884.1 BC043630 BC106312 CM004470 AAH43630.1 AAI06313.1 OCT89430.1 JP018546 AES07144.1 AEYP01046648 AEYP01046649 AEYP01046650 GFDF01008657 JAV05427.1 AK054641 BAG51404.1 AGTP01003578 AGTP01003579 BC109999 NDHI03003463 PNJ43415.1 GFWV01001728 MAA26458.1 AAPE02020328 GABE01000318 JAA44421.1 JH880741 ELR59236.1 ACPB03000921 GAMT01004433 GAMS01011197 GAMR01008192 GAMQ01000842 GAMP01008558 JAB07428.1 JAB11939.1 JAB25740.1 JAB41009.1 JAB44197.1 GADI01000307 JAA73501.1 HAAF01008141 CCP79965.1 GEFM01000589 JAP75207.1 GFAA01003211 JAU00224.1 AGCU01107667 AGCU01107668 AGCU01107669 AGCU01107670 AGCU01107671 GGLE01002202 MBY06328.1 AAPE02039582 AQIB01022561 GFPF01011876 MAA23022.1 AHAT01004847 AJWK01017454 ABJB010332325 ABJB010371023 ABJB010500282 ABJB010556892 DS730006 EEC06944.1 UFQS01000126 UFQT01000126 SSX00123.1 SSX20503.1 KE164028 EPQ14679.1 CYRY02036198 VCX15913.1 GEDV01008269 JAP80288.1
ODYU01011558 SOQ57370.1 KQ459597 KPI94787.1 KQ460207 KPJ16669.1 AAKN02050765 GFFW01002061 JAV42727.1 AAEX03016332 AAEX03016333 AANG04001761 GL193224 EFB18985.1 ACTA01059787 NEVH01005277 PNF39145.1 KK852989 KDR12791.1 KN120660 KFO37968.1 GACK01007068 JAA57966.1 AK155315 BC049638 BC061258 JL615911 AEH58118.1 GDHF01020029 GDHF01018456 JAI32285.1 JAI33858.1 BC079451 KB031080 ELK03469.1 AMGL01041947 GABZ01006687 JAA46838.1 GEBF01000724 JAO02909.1 AEMK02000056 AQIB01139464 KB572555 EMP27224.1 AF039029 CR456811 AK289475 CH471136 BC004203 JSUE03038753 JSUE03038754 JSUE03038755 JU332393 JU473849 AFE76148.1 AFH30653.1 AJFE02064782 AJFE02064783 AJFE02064784 GABC01007093 NBAG03000345 JAA04245.1 PNI37896.1 AACZ04060370 AK305247 GABF01007439 GABD01006216 BAK62241.1 JAA14706.1 JAA26884.1 BC043630 BC106312 CM004470 AAH43630.1 AAI06313.1 OCT89430.1 JP018546 AES07144.1 AEYP01046648 AEYP01046649 AEYP01046650 GFDF01008657 JAV05427.1 AK054641 BAG51404.1 AGTP01003578 AGTP01003579 BC109999 NDHI03003463 PNJ43415.1 GFWV01001728 MAA26458.1 AAPE02020328 GABE01000318 JAA44421.1 JH880741 ELR59236.1 ACPB03000921 GAMT01004433 GAMS01011197 GAMR01008192 GAMQ01000842 GAMP01008558 JAB07428.1 JAB11939.1 JAB25740.1 JAB41009.1 JAB44197.1 GADI01000307 JAA73501.1 HAAF01008141 CCP79965.1 GEFM01000589 JAP75207.1 GFAA01003211 JAU00224.1 AGCU01107667 AGCU01107668 AGCU01107669 AGCU01107670 AGCU01107671 GGLE01002202 MBY06328.1 AAPE02039582 AQIB01022561 GFPF01011876 MAA23022.1 AHAT01004847 AJWK01017454 ABJB010332325 ABJB010371023 ABJB010500282 ABJB010556892 DS730006 EEC06944.1 UFQS01000126 UFQT01000126 SSX00123.1 SSX20503.1 KE164028 EPQ14679.1 CYRY02036198 VCX15913.1 GEDV01008269 JAP80288.1
Proteomes
UP000007151
UP000218220
UP000053268
UP000053240
UP000005447
UP000001811
+ More
UP000248481 UP000002254 UP000245341 UP000007646 UP000011712 UP000076420 UP000233160 UP000008912 UP000235965 UP000261680 UP000291021 UP000245340 UP000027135 UP000028990 UP000081671 UP000000589 UP000002281 UP000002494 UP000010552 UP000002356 UP000008227 UP000233060 UP000189704 UP000189706 UP000029965 UP000031443 UP000005640 UP000006718 UP000233200 UP000002280 UP000240080 UP000248480 UP000002277 UP000233180 UP000186698 UP000000715 UP000248483 UP000248482 UP000005215 UP000009136 UP000233220 UP000079721 UP000001074 UP000245320 UP000265300 UP000015103 UP000233040 UP000008225 UP000007267 UP000252040 UP000248484 UP000233020 UP000261681 UP000018468 UP000092461 UP000001555 UP000233080 UP000261440
UP000248481 UP000002254 UP000245341 UP000007646 UP000011712 UP000076420 UP000233160 UP000008912 UP000235965 UP000261680 UP000291021 UP000245340 UP000027135 UP000028990 UP000081671 UP000000589 UP000002281 UP000002494 UP000010552 UP000002356 UP000008227 UP000233060 UP000189704 UP000189706 UP000029965 UP000031443 UP000005640 UP000006718 UP000233200 UP000002280 UP000240080 UP000248480 UP000002277 UP000233180 UP000186698 UP000000715 UP000248483 UP000248482 UP000005215 UP000009136 UP000233220 UP000079721 UP000001074 UP000245320 UP000265300 UP000015103 UP000233040 UP000008225 UP000007267 UP000252040 UP000248484 UP000233020 UP000261681 UP000018468 UP000092461 UP000001555 UP000233080 UP000261440
Pfam
PF11538 Snurportin1
ProteinModelPortal
A0A1E1W629
A0A212F3P0
A0A2A4K620
A0A2H1WWD1
A0A194PN93
A0A194RGV1
+ More
A0A286XZ28 G1SVX5 A0A2Y9HIU7 A0A250YGF2 E2RL29 A0A2U3YLA0 G3SU83 A0A2I2U2N7 A0A2U3YLN3 A0A2C9JQV0 D2HRJ8 A0A2K6GJ74 G1LNW2 A0A2J7RE89 A0A384DI61 A0A2U3WGK1 A0A067QSF5 A0A091E5F6 A0A2U3WGK3 L7M0W0 A0A1S3ESQ6 Q80W37 A0A2U3ZPE1 K9K3S2 A0A0K8V140 Q68FP5 L5JVK4 W5NV98 K9IJ54 A0A0P6K888 F1SJ73 A0A2K5N7X8 A0A1U7TLZ4 A0A1U8BLH0 A0A0D9RPX3 M7ARF9 O95149 H9FND9 A0A2K6RII2 F7CUM4 A0A2R9AYD3 A0A2J8KS94 A0A2Y9R1Y1 A0A2Y9QU47 G2HET3 A0A2K6M1C0 Q7ZYM4 G9KQG5 M3Z0V2 A0A1L8DGB2 A0A2Y9NP54 B3KNP2 A0A2Y9KE09 I3M6X2 Q2TBK8 A0A2J8UDQ5 A0A293LEZ5 A0A2K6TZZ8 A0A1S2ZWT4 G1QFG9 K7CPC7 A0A2Y9K316 A0A2U3V1V0 L8ISB6 A0A340Y9X2 T1HKK1 A0A2K5PGP9 U3C196 A0A0K8RR08 U6DAI9 A0A131Y8R0 A0A1E1XLW5 K7GA50 K7GA73 A0A2R5LA18 A0A341CS82 A0A2Y9FAV2 G1Q2I2 A0A2K5D360 A0A0D9SD17 A0A384BEM8 A0A224Z910 W5ND32 A0A1B0CLM2 B7PK22 A0A336LV04 A0A2K5I7V9 S7NBF9 A0A3P4Q0N3 A0A131YNZ9 A0A3B4EK03
A0A286XZ28 G1SVX5 A0A2Y9HIU7 A0A250YGF2 E2RL29 A0A2U3YLA0 G3SU83 A0A2I2U2N7 A0A2U3YLN3 A0A2C9JQV0 D2HRJ8 A0A2K6GJ74 G1LNW2 A0A2J7RE89 A0A384DI61 A0A2U3WGK1 A0A067QSF5 A0A091E5F6 A0A2U3WGK3 L7M0W0 A0A1S3ESQ6 Q80W37 A0A2U3ZPE1 K9K3S2 A0A0K8V140 Q68FP5 L5JVK4 W5NV98 K9IJ54 A0A0P6K888 F1SJ73 A0A2K5N7X8 A0A1U7TLZ4 A0A1U8BLH0 A0A0D9RPX3 M7ARF9 O95149 H9FND9 A0A2K6RII2 F7CUM4 A0A2R9AYD3 A0A2J8KS94 A0A2Y9R1Y1 A0A2Y9QU47 G2HET3 A0A2K6M1C0 Q7ZYM4 G9KQG5 M3Z0V2 A0A1L8DGB2 A0A2Y9NP54 B3KNP2 A0A2Y9KE09 I3M6X2 Q2TBK8 A0A2J8UDQ5 A0A293LEZ5 A0A2K6TZZ8 A0A1S2ZWT4 G1QFG9 K7CPC7 A0A2Y9K316 A0A2U3V1V0 L8ISB6 A0A340Y9X2 T1HKK1 A0A2K5PGP9 U3C196 A0A0K8RR08 U6DAI9 A0A131Y8R0 A0A1E1XLW5 K7GA50 K7GA73 A0A2R5LA18 A0A341CS82 A0A2Y9FAV2 G1Q2I2 A0A2K5D360 A0A0D9SD17 A0A384BEM8 A0A224Z910 W5ND32 A0A1B0CLM2 B7PK22 A0A336LV04 A0A2K5I7V9 S7NBF9 A0A3P4Q0N3 A0A131YNZ9 A0A3B4EK03
PDB
3GJX
E-value=3.63561e-48,
Score=483
Ontologies
GO
PANTHER
Topology
Subcellular location
Nucleus
Cytoplasm Nucleoplasmic shuttling protein. Its nuclear import involves the nucleocytoplasmic transport receptor importin beta. It is re-exported to the cytoplasm by the XPO1-dependent nuclear export receptor pathway. With evidence from 1 publications.
Cytoplasm Nucleoplasmic shuttling protein. Its nuclear import involves the nucleocytoplasmic transport receptor importin beta. It is re-exported to the cytoplasm by the XPO1-dependent nuclear export receptor pathway. With evidence from 1 publications.
Length:
386
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.30362
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02943
outside
1 - 386
Population Genetic Test Statistics
Pi
309.306149
Theta
223.204177
Tajima's D
1.367996
CLR
0.09267
CSRT
0.755512224388781
Interpretation
Uncertain
