SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02646
Pre Gene Modal
BGIBMGA002648
Annotation
Ankyrin_repeat_domain-containing_protein_49_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 1.511 Extracellular   Reliability : 1.385 Nuclear   Reliability : 1.442
 

Sequence

CDS
ATGTCTGATGAGGATGATTCCGATGTTGAAGCAAAATATTTCAAAGAAATAAGTGATGAAATACAGACTTTGAAAAAAAATCCAGAAACGTCTGGTATGTTTGTTTCTGGTTGGGACGACGCAGATCAGGATGTTGATTTGGTGAAAGATCCGAAAGCAAATCCGATTGATCATGTATTATGGGCTGCAGAACACAATAAGCTAGACACTCTCAGAGAACTACTAGTTGCCAAACCAGGGCTTGTTCATTCAAGAGACTCCGATGGTTACACTCCACTACATCGAGCTGCTTATTCAAATCATTTGGATGCAATATCTTTACTGCTAAGTTTTGGAGCAAAGGTTAGCAGTAAATCTGAACTTGGTTGGACGCCATTACACTCTGCATGTAATTGGAATAATTATCATATTGTAGCAAGACTGTTGGCTGCAGGTGCAGATCCTGCTGCTCCTTCTGAAGGAGTACAAACTCCTCTTCATTTAGCTTCCCATCTTAGTCACTGCAAATCAACTTTACTCCTACTATTGTTACGCGAAGACTTAGTTGAGGTTGCAAGAAAACCGAACAATAGTGGGGAAACACCAGAACAGTTGGCTCGCGGTCATGGCATATATGCTCCTTTGTTTGAAATGGTTTCACCAGCATCATCATATGTTTCTTCTTTAGCTTTCACATGTAATCGTTATTTACAAACAAATAAGTAA
Protein
MSDEDDSDVEAKYFKEISDEIQTLKKNPETSGMFVSGWDDADQDVDLVKDPKANPIDHVLWAAEHNKLDTLRELLVAKPGLVHSRDSDGYTPLHRAAYSNHLDAISLLLSFGAKVSSKSELGWTPLHSACNWNNYHIVARLLAAGADPAAPSEGVQTPLHLASHLSHCKSTLLLLLLREDLVEVARKPNNSGETPEQLARGHGIYAPLFEMVSPASSYVSSLAFTCNRYLQTNK

Summary

EMBL
BABH01014117    GAIX01003900    JAA88660.1    ODYU01007628    SOQ50577.1    NWSH01000078    + More
PCG79830.1    KQ459597    KPI94773.1    AGBW02008206    OWR54015.1    JTDY01009028    KOB64186.1    KQ460207    KPJ16655.1    DS231823    EDS26602.1    CH479184    EDW37038.1    CH379058    EAL34429.1    JXUM01028602    KQ560826    KXJ80720.1    GFDL01011801    JAV23244.1    AXCM01001126    OUUW01000046    SPP90018.1    CAQQ02043486    JXUM01112136    KQ565564    KXJ70873.1    GGFK01012157    MBW45478.1    CH916368    EDW02834.1    CP012523    ALC39704.1    GGFK01012158    MBW45479.1    CH940649    EDW63664.1    CH902620    EDV30721.1    GANO01003715    JAB56156.1    GAMC01016829    GAMC01016828    JAB89726.1    GDAI01002601    JAI15002.1    GAKP01001828    JAC57124.1    CM000361    CM002910    EDX05088.1    KMY90311.1    CH480818    EDW51790.1    GFDG01000857    JAV17942.1    GGFM01007978    MBW28729.1    CH954177    EDV57985.1    CH933807    EDW11787.1    GDHF01031235    GDHF01017950    JAI21079.1    JAI34364.1    GBXI01011244    JAD03048.1    KA648767    AFP63396.1    CH477223    EAT47207.1    JXJN01009682    UFQS01001175    UFQS01001201    UFQT01001175    UFQT01001201    SSX09427.1    SSX29483.1    CM000157    EDW89044.1    GECZ01020761    GECZ01004895    JAS49008.1    JAS64874.1    GGFJ01008974    MBW58115.1    CH963913    EDW77469.1    CCAG010019758    AE014134    AAF53427.1    AY070830    AAL48452.2    GGFL01003171    MBW67349.1    GGFJ01008972    MBW58113.1    GGFJ01008973    MBW58114.1    AXCN02000604    GBYB01009000    JAG78767.1    GGFK01012703    MBW46024.1    KQ414613    KOC69031.1    KQ042799    KKF10521.1    AAAB01008964    EAA12776.3    JARK01001380    EYC13196.1    GEZM01081202    JAV61798.1    KQ435037    KZC14097.1    AJVK01007505    KQ041390    KKF27228.1    NEVH01013559    PNF28662.1    CVRI01000055    CRL01374.1    JARK01001513    EYB93896.1    CP026250    AWP05617.1    KQ435824    KOX72091.1    AYCK01004597    CAAE01014928    CAG06214.1    JRES01001667    KNC21071.1    AERX01027879   
Pfam
PF12796   Ank_2        + More
PF17740   DUF5577
PF05648   PEX11
PF00023   Ank
PF13606   Ank_3
PF10204   DuoxA
Interpro
IPR020683   Ankyrin_rpt-contain_dom        + More
IPR036770   Ankyrin_rpt-contain_sf       
IPR002110   Ankyrin_rpt       
IPR008733   PEX11       
IPR040772   C19orf47_SAM       
IPR013761   SAM/pointed_sf       
IPR001660   SAM       
IPR041477   DUF5577       
IPR039161   C19orf47-like       
IPR018469   Dual_oxidase_maturation_fac       
SUPFAM
SSF48403   SSF48403        + More
SSF47769   SSF47769       
Gene 3D
PDB
5LEM     E-value=7.2202e-13,     Score=176

Ontologies

Topology

Length:
234
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.44256
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07491
outside
1  -  234
 
 

Population Genetic Test Statistics

Pi
320.951351
Theta
212.343405
Tajima's D
1.30206
CLR
0
CSRT
0.741262936853157
Interpretation
Uncertain
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