SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02643
Pre Gene Modal
BGIBMGA002657
Annotation
Pleckstrin-like_proteiny_domain-containing_family_J_member_1_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 1.751
 

Sequence

CDS
ATGAAATGCAACGTTCGAGAAGTCGCTCAGCTGAGCGATCGACCTTGTGTAATTGAAGGAAGATTAAATTACAAAAAGATTACAAATGGAAGCTACAGACATCAAGCAATTTTTAAGGAACGATGGTTTCGGCTAATTAACAACTATTTATTTTATTTTAAAATAAGTGAAATGGGTAAATTTGACACGAAAAACCCTGCTGGAGTATTTGTATTGGAAAACTCGTCAATACAGATGGAACATGGCCAGAGCATACCATTCTCATTCTCAATTTCATTTATAGATGAACCCGAAAAGAGGCATGTATTTGCTGCGCGAGCTGAGGATAATGTAGTAAAATGGGTAATCAGTTTACGGGAATGCTCATATGAATATTTACGTAATAGACTCCATACTTTACAATCCAAAATATTCTCAATCACTGGCAAGGATCCATTATTGTTGGTGCCTAGAAATGAGGGTGCTTGTTTGTGGGCACCTGCTGTTCCTTTTTCAACAACACCTGCATGCACAGTGAACACAAGCTCGTTTAGTTGTCATCTCCACACTAACGGTGCATTCACTCTTGAACGAAGCAAGTCAGATGTTCAGGCCTACAAGCATTGTCGTACGGAGTTCATACAAAAAGCTACTTTCTATACCAATGAATCAAAACCAAAAAGTGAAAAAGATGAAGAATGCACTTTTGCATTAGGAAGAAGTAAAACCTCAGCTCTTCTTCCTGGGAGTGTAAATCTAATGGATTCTAGTATATTTGACAATCGCCCTTCATACTCCAGAGCGGCGCCCAGTCCGCCCGTACGTACTAAACTGTCACCAAATAGTCGACGTGCTGAATTAAACTATGATGTCAAAGTATTTGCTGAACATGGAAGGCATTTGAATACAACAGGAATACTTGATGACATACCTGTGCCACCAAGGAGAAAAATATCACCCAAACATTTAGTGCCCAATGACAGTGATTCTAATAGAGAACTACAGACATCAAGTGAAGATCTTATTACGTTTTAA
Protein
MKCNVREVAQLSDRPCVIEGRLNYKKITNGSYRHQAIFKERWFRLINNYLFYFKISEMGKFDTKNPAGVFVLENSSIQMEHGQSIPFSFSISFIDEPEKRHVFAARAEDNVVKWVISLRECSYEYLRNRLHTLQSKIFSITGKDPLLLVPRNEGACLWAPAVPFSTTPACTVNTSSFSCHLHTNGAFTLERSKSDVQAYKHCRTEFIQKATFYTNESKPKSEKDEECTFALGRSKTSALLPGSVNLMDSSIFDNRPSYSRAAPSPPVRTKLSPNSRRAELNYDVKVFAEHGRHLNTTGILDDIPVPPRRKISPKHLVPNDSDSNRELQTSSEDLITF

Summary

Pfam
PF00169   PH
Interpro
IPR001849   PH_domain        + More
IPR011993   PH-like_dom_sf       
Gene 3D

Ontologies

GO

Topology

Length:
337
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02665
Exp number, first 60 AAs:
0.02355
Total prob of N-in:
0.08688
outside
1  -  337
 
 

Population Genetic Test Statistics

Pi
154.535065
Theta
157.755639
Tajima's D
-0.200571
CLR
0.496389
CSRT
0.317734113294335
Interpretation
Uncertain
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