SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02642
Pre Gene Modal
BGIBMGA002647
Annotation
erythrocyte_carbonic_anhydrase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.324 Mitochondrial   Reliability : 1.006
 

Sequence

CDS
ATGGCAGACAACGAATGGGGATATACCTGTGAAAACGGTCCGGCGACATGGATAGAGAAGTTTCCTCAAGCACGTGGCACTCGACAAAGTCCCGTCGATATTGTGACTTCTCGCGTCAAAAGTGGAGCTTCCCTGCCGCCATTGAAATGGCGGTACTCTGTCAATCATCCTCGTTCCATCGTCAATCCTGGCTACTGTTGGCGTGTCGACGAAAACGGCTATGATTCAGAATTAAAAGGTGGACCTCTCAACAACGATGTTTACAAATTACAACAATGGCATTGCCACTGGGGAGCGCTCAACGGGGAGGGCTCAGAACATACAGTGGACGGTCGCTCGTTCTCCGGAGAACTCCACCTGGTTCACTGGAACACAAGCAAGTACCACAGCTTCGGGGAGGCGGCAGGAAAACCAGATGGACTAGCCGTTTTAGGAGTCCTATTAATGGTTGGCTCGAAACACCGAGAGCTCGATAAAGTTGTACAGTTACTGCCTTTCGTGCAACACAAAGGCGATAAAGTTACATTTTGCGAGCCCCTCGACCCTGCCAAGCTGCTACCAACCAAGACAGCTTACTGGACGTACCCAGGGTCTTTGACAACACCACCGTGCACGGAGTCGGTGATTTGGCTCCTCTTCAAAGAACCCGTACAAGTTTCCGCTGAACAGCTCTCTTTGATGCGGAAGTTGAAATGCGGTGAAGCGTCATGCGGCGTTGAGGCGATGGAGCTGCTCCACAATTACCGGCCCACGCTGCCCCTCGGCAACAGGGAGTTGCGCGAGTACGGCGGCAACTAG
Protein
MADNEWGYTCENGPATWIEKFPQARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVHWNTSKYHSFGEAAGKPDGLAVLGVLLMVGSKHRELDKVVQLLPFVQHKGDKVTFCEPLDPAKLLPTKTAYWTYPGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKLKCGEASCGVEAMELLHNYRPTLPLGNRELREYGGN

Summary

Similarity
Belongs to the alpha-carbonic anhydrase family.
EMBL
DQ311265    ABD36210.1    AGBW02008206    OWR54018.1    NWSH01000078    PCG79861.1    + More
KZ150098    PZC73575.1    KQ460207    KPJ16651.1    ODYU01004121    SOQ43658.1    BABH01014126    JTDY01000024    KOB79366.1    KQ459597    KPI94769.1    EZ422547    ADD18823.1    GANO01000635    JAB59236.1    KA646182    AFP60811.1    GAPW01003210    GAPW01003209    GAPW01003208    JAC10390.1    GGFJ01008233    MBW57374.1    GAMD01003039    JAA98551.1    GGFL01004597    MBW68775.1    GGFK01001148    MBW34469.1    GAPW01003211    JAC10387.1    AE014134    AY058327    DQ062772    AAF53332.1    AAL13556.1    AAY56645.1    GGFM01000929    MBW21680.1    CH480818    EDW51675.1    CM000361    CM002910    EDX04965.1    KMY90158.1    CH902620    EDV32010.1    DQ062773    AAY56646.1    CH477320    EAT43649.1    CM000157    EDW88350.1    GBXI01016059    JAC98232.1    GAKP01005000    GAKP01004999    GAKP01004998    JAC53953.1    CH933807    EDW13487.1    AXCN02001986    GDHF01022788    GDHF01020090    GDHF01003279    JAI29526.1    JAI32224.1    JAI49035.1    CCAG010008796    CCAG010008797    CCAG010008798    CH954177    EDV58640.1    DQ518576    ABF66618.1    JXJN01009688    CH963920    EDW78040.1    CH940654    EDW57535.1    GFDF01008932    JAV05152.1    CH379061    EAL33308.1    CH479195    EDW27324.1    CH916368    EDW03208.1    CP012523    ALC39550.1    GAMC01016618    JAB89937.1    JXUM01020699    JXUM01020700    GFDL01000074    JAV34971.1    GFDL01000073    JAV34972.1    AJVK01004379    OUUW01000010    SPP85455.1    UFQS01000363    UFQT01000363    SSX03176.1    SSX23542.1    CVRI01000010    CRK88802.1    JRES01001517    KNC22323.1    APCN01001635    AXCM01001635    KZ288229    PBC31674.1    JR041354    AEY59421.1    GL434492    EFN74853.1    GECZ01014792    JAS54977.1    GBYB01013021    JAG82788.1    GEDC01008114    JAS29184.1    ATLV01025177    KE525371    KFB52334.1    LC126080    BAU68125.1    KK107372    EZA51697.1    GL447257    EFN86633.1    GECZ01030791    JAS38978.1    GL768230    EFZ11655.1    AJWK01026760    AJWK01026761    AJWK01026762    KK853231    KDR09625.1    GEDC01023664    JAS13634.1    KQ414667    KOC64838.1    GBYB01014232    JAG83999.1    QOIP01000004    RLU23739.1    ADTU01011224    ADTU01011225    ADTU01011226    GFTR01004371    JAW12055.1    GBBI01001287    JAC17425.1    DS231834    EDS32640.1    GECL01002387    JAP03737.1    GBGD01002536    JAC86353.1    GDKW01000288    JAI56307.1    GBHO01029697    GBHO01029696    JAG13907.1    JAG13908.1    GDHC01021234    JAP97394.1   
Pfam
PF00194   Carb_anhydrase
Interpro
IPR023561   Carbonic_anhydrase_a-class        + More
IPR018338   Carbonic_anhydrase_a-class_CS       
IPR001148   CA_dom       
IPR036398   CA_dom_sf       
IPR011989   ARM-like       
IPR000225   Armadillo       
IPR016024   ARM-type_fold       
SUPFAM
SSF51069   SSF51069        + More
SSF48371   SSF48371       
Gene 3D
PDB
4HBA     E-value=1.28241e-52,     Score=520

Ontologies

Topology

Length:
265
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01845
Exp number, first 60 AAs:
0
Total prob of N-in:
0.09129
outside
1  -  265
 
 

Population Genetic Test Statistics

Pi
267.407808
Theta
193.369025
Tajima's D
1.040261
CLR
0.289689
CSRT
0.668016599170042
Interpretation
Uncertain
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