Silkworm Genome Informatics Database

Gene

KWMTBOMO02639

Annotation

Uncharacterized_protein_OBRU01_00520_[Operophtera_brumata]

Location

Bomo_Chr5(-):7690767-7693977 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.009

CDS

ATGTCGGAGTCTGCGCGTTCCGCCGGGTCTCTCGTCTCGCCGTACGCTCTTGCGGCTTACGTCGCGTGTATTGCTGGCGTTGGTGCTTTATTGAACTGCTCACTTGTAGCTGCGCTTCTCAGAACTTCAAAAAATGGGTTGATGAACATTATCATTCAATTGGCAGTGGCAGATCTTATCCTGGAATCGACAATCATTCCAGAACTGTGCTATTATAATTTCCGGACATGGCAATTTAGCAACAACGGATGTATTATCTATAGGGGATTTAACGTACTGGCATCAACAGCATGTTCTTATTTTGTCGTTACTATTGCTTTACACACACTGGCAATTCGTACTCGTATACCATTCCTTAAAAGTGGTAGGACGTATTGCAAGCCTGACTGCATACTTTGGCTCTGA

Protein

MSESARSAGSLVSPYALAAYVACIAGVGALLNCSLVAALLRTSKNGLMNIIIQLAVADLILESTIIPELCYYNFRTWQFSNNGCIIYRGFNVLASTACSYFVVTIALHTLAIRTRIPFLKSGRTYCKPDCILWL

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

A0A0L7LW14 A0A2H1VZP5 A0A2W1BJY0 A0A2A4K705 A0A194PPV3 A0A212FJY9 + More
A0A182XHA7 A0A182L7W2 A0A182HR26 A0A182HCL7 A0A182U8V1 A0A182FN58 D6WMD8 W5JG80 A0A182PM96 A0A182Y640 A0A182W8K2 A0A182R1R8 A0A226NJI4 A0A226PRP7

Pubmed

26227816 28756777 26354079 22118469 20966253 26483478 + More
18362917 19820115 20920257 23761445 25244985 24621616

EMBL

JTDY01000024 KOB79361.1 ODYU01005438 SOQ46288.1 KZ150098 PZC73577.1 + More
NWSH01000078 PCG79859.1 KQ459597 KPI94764.1 AGBW02008206 OWR54020.1 APCN01001634 JXUM01127720 KQ567226 KXJ69546.1 KQ971343 EFA04255.2 ADMH02001300 ETN63086.1 MCFN01000035 OXB67547.1 AWGT02000022 OXB82773.1

Proteomes

UP000037510 UP000218220 UP000053268 UP000007151 UP000076407 UP000075882 + More
UP000075840 UP000069940 UP000249989 UP000075902 UP000069272 UP000007266 UP000000673 UP000075885 UP000076408 UP000075920 UP000075900 UP000198323 UP000198419

Pfam

PF00001 7tm_1

Interpro

IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn
IPR000670   Urot_II_rcpt

ProteinModelPortal

A0A0L7LW14 A0A2H1VZP5 A0A2W1BJY0 A0A2A4K705 A0A194PPV3 A0A212FJY9 + More
A0A182XHA7 A0A182L7W2 A0A182HR26 A0A182HCL7 A0A182U8V1 A0A182FN58 D6WMD8 W5JG80 A0A182PM96 A0A182Y640 A0A182W8K2 A0A182R1R8 A0A226NJI4 A0A226PRP7

PDB

4N6H E-value=0.011115, Score=84

KEGG

101745350 no KO assigned | (RefSeq) uncharacterized LOC101745350

GO

GO:0016021 GO:0004930 GO:0001604 GO:0008217 GO:0097746 GO:0007186 GO:0006812 GO:0015299 GO:0006631 GO:0006635 GO:0006281 GO:0048384

Length:

134

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

55.76174

Exp number, first 60 AAs:

28.8209

Total prob of N-in:

0.20491

POSSIBLE N-term signal

sequence

outside

1 - 14

TMhelix

15 - 37

inside

38 - 89

TMhelix

90 - 112

outside

113 - 134

Pi

159.919458

Theta

149.543403

Tajima's D

0.100201

CLR

0.193147

CSRT

0.400429978501075

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics