Gene

KWMTBOMO02636

Pre Gene Modal

BGIBMGA002643

Annotation

PREDICTED:_phosphatidate_phosphatase_LPIN2_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr5(+):7632658-7674227      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.799

CDS

ATGGGGTTGTACGGAAAACCGGCCGTCATGTATTCTATGAATTATATCGGTCAGTTCATAGCGAACTTTCGCGAATTCTATAATGAGATCAACGCAGCGACACTTACTGGAGCTATAGATGTCATCGTAGTCGAACAGCCCGATGGCAGCTTCACCTGTTCGCCATTCCACGTGCGTTTTGGGAAACTCGGCGTGCTTCGATCCAGATTTAAAGTGGTGGACCTAGAATTGAATGGTGAGCCTTTGAATATCCACATGAAGCTGGGGGAGTCTGGTGAGGCATTTTTCGTTGAGGAAGTAGGCGAAGACGAAGCTGAATGTTCCGCTCACCTTGCCACCTCGCCCATCCCGGCTGCAAGGTTCGAGGAATTATATGAGCCACGTCGTCGCAATTCGCTCTCTGCTGTCGAACCCGATCATGGGCAGGCATCAGATTATACTAAACGAAGATACACTGCAGACGGACAAACTATGCAGAAACCGGACTTGACCAAGATTAAGAAGAATACGACGAAAGACGAGAAACCATCAAAAGACAACGAGGCCCTGTTTGAAATGGAGGACCTCGACGAAGGTACCGACTGGACGGACGGAAAAACACCGAAAACGTTCGCGGCCACTCAGCTTGGCGAAGCGGAAAGCGAAGCGAATCAGGCCGTACAAAAAATTAGCGTCCACAATGACTTTAGACCTATAGACGTCGCGCCCACCGAGGAGGAGGTCAAGCAGAATGGGAACGGCAAGAAAAAGAAAAAAACCAGAAAAGTCAGCTCGAAGAAGAAGCACCAAAGAAAGTCGTCCACTAGTTCTGTATCTAGTCAGTCGGACCGCGCTGGCTCGGAGCAACGAGCCTTGCAGTCGACCGCCATTGTTAACGCCACTGATATGAGTTTCTTTAGTGACACCGAACTGAATGCTGCTACATTGAGCAGAGGTTCTCGGGGCGGTACTCCAGTACAGTCGGACACCGAGGTGGAGCTTTCGAGAACAACGACCGGCGACAAGTCATCGCAGTCGTGGAGGTGGGGCGAACTCCCGGAGCCTCCGGTGCGCGGGGTGGAGTCAGGCGAGTGCGCGTCGGCGCCGTCCCCTGCGTCCGCCTCCCCCGCGTCCCCCTCCTCGCCCGCTTCCCCCGCCTCGCCCGCCGAGCCGCTCAGCTCCGACGAGGAGCGGCCCAGCCGGCGTGGCGTGCTCAGCGGCATGTTCCGCTTCATGTCGACGCGGGACTCTGCCGACAACGCGCCCGAGGGGATCTACCTGGACGACCTGGACCGTGGTCAGGTCAACCCCGACCTGTACTTCCCGAAATATCATGCTGAACGTCATCGTGGCAGCTCGGTGGTGCAGCACGCGCGCGCCGCTCCCACGGAGGAGGAGTACGAGTCCGGGAACGGCCCGTCCCTGCCGCAGTCGCCAGCCTCGCTCGAACCGCCCGTCATGGACTCGGACGACGACGACAAAATCTTAGCAAAGGGTCAAGTGTGTCTGTACGTGCGCGAGGACAACGTGTCCCGCGCGCTGCCCTTCGAGGAGTTCTGCTCCGACGGCGCCCGACTGGCGGCGGAGGGCCGGCTGCTGGTGCGGCTCGGCGACCGCTGGATGCCGTGGCGCAGCGCGGGGCCGCTCATCCTGTCCCTGCTCGTGTACCGCCGGCCTTTGCCAAACCGCGTCTTGGAGTCGCTAGAGAAAGGTTCGGAGAAGGAAGAGGCGGACGCGGCGAGCTCGCACCGCGGAGACAGCGGCAGCAAGCCCCGCGCCTACTCCTGGTGGAGCTGGAGGCGGACGTCCGAGGCTAAACATGCCGAAAAGACTTCTCTATCGGACGACATTCCAACAAAGTCGAGTCCACCACAATCCGAAGCCGTAGACACTGTTGCACTCCAAGAGACGCCTGCGGAAGAATCGACTGTGGAAACAATCGAAGAGACACAAAACATTGTAAACGTTGATGACGTGTTCGAATCTCAGCCCGTCGAAGTGGAGGAAAACATACTTACGATGTCAGAAAACGCTGTCCACCAAGAACAAGCAATGGATCACCAAGACCAGAGTTCATCGGATTCGGATCAAGAGCAGCAGCTGCCCAGGTCGTCGAGGGCGCGCCGCCACTCGACCTTCCGGAAGACCCTTCGTTTGTCATCAGAACAGATTAGAAACTTGAACCTCCGCGAGGGCATGAACGAGATGGTGTTCAGCGTGACCACGGCGTACCAGGGCACCACGCGCTGCAAGTGCAACGTGTTCCGCTGGCGATACGACGACAAGGTCGTCATCTCCGACATCGACGGAACCATCACCAAATCGGACGTACTGGGCCATATATTCCCAATGGTTGGCAAAGATTGGGCCCAGTCTGGGGTCGCTCAACTATTCACGAAGATAAAGAACAACGGATATCAACTGCTCTATCTGTCGGCCAGGGCTATCGGACAAGCCAAAGTGACTCGGGAATATCTGCGCTCAATCAGACAAGGCGAGGTGTGTCTACCGGACGGGCCGCTGCTGCTGAACCCTACGTCGTTGCTTCGCGCCTTCCATCGAGAGGTCATCGAGAAGAAACCAGAAGAATTCAAAATTCAGTGCCTCGCCGATATCAAGGCGCTGTTCCCTCAAGGGTCTAATCCATTTTACGCTGGCTATGGGAATAGAGTGAATGACGTTTGTGCATATCAAGCTGTCGGTATTCCGATTGTAAGAATTTTCACCATAAACTATAAGGGCGAATTAAAACATGAACTAACACAGACATTCCAGTCCACGTATTCCCATATGTCAGTGCTGGTGGACCAGGTGTTTCCGCCGGCGCAGTGCGAGCCCAGCGACGAGTTCTCGCAAACGGTGTACTGGCGCGACCCGCTGCCCGCCGTCGACCTGCCACCGATCGTCCCACCGCAGCCCAAACATTAA

Protein

MGLYGKPAVMYSMNYIGQFIANFREFYNEINAATLTGAIDVIVVEQPDGSFTCSPFHVRFGKLGVLRSRFKVVDLELNGEPLNIHMKLGESGEAFFVEEVGEDEAECSAHLATSPIPAARFEELYEPRRRNSLSAVEPDHGQASDYTKRRYTADGQTMQKPDLTKIKKNTTKDEKPSKDNEALFEMEDLDEGTDWTDGKTPKTFAATQLGEAESEANQAVQKISVHNDFRPIDVAPTEEEVKQNGNGKKKKKTRKVSSKKKHQRKSSTSSVSSQSDRAGSEQRALQSTAIVNATDMSFFSDTELNAATLSRGSRGGTPVQSDTEVELSRTTTGDKSSQSWRWGELPEPPVRGVESGECASAPSPASASPASPSSPASPASPAEPLSSDEERPSRRGVLSGMFRFMSTRDSADNAPEGIYLDDLDRGQVNPDLYFPKYHAERHRGSSVVQHARAAPTEEEYESGNGPSLPQSPASLEPPVMDSDDDDKILAKGQVCLYVREDNVSRALPFEEFCSDGARLAAEGRLLVRLGDRWMPWRSAGPLILSLLVYRRPLPNRVLESLEKGSEKEEADAASSHRGDSGSKPRAYSWWSWRRTSEAKHAEKTSLSDDIPTKSSPPQSEAVDTVALQETPAEESTVETIEETQNIVNVDDVFESQPVEVEENILTMSENAVHQEQAMDHQDQSSSDSDQEQQLPRSSRARRHSTFRKTLRLSSEQIRNLNLREGMNEMVFSVTTAYQGTTRCKCNVFRWRYDDKVVISDIDGTITKSDVLGHIFPMVGKDWAQSGVAQLFTKIKNNGYQLLYLSARAIGQAKVTREYLRSIRQGEVCLPDGPLLLNPTSLLRAFHREVIEKKPEEFKIQCLADIKALFPQGSNPFYAGYGNRVNDVCAYQAVGIPIVRIFTINYKGELKHELTQTFQSTYSHMSVLVDQVFPPAQCEPSDEFSQTVYWRDPLPAVDLPPIVPPQPKH

Uniprot

H9IZF8   A0A2A4K7D8   A0A194PUE7   A0A2A4K6Z7   A0A2A4K6I6   A0A212FJV5   + More
A0A2A4K7V5   A0A2H1VZL6   A0A1E1W7Z0   A0A2W1BLJ4   D6WRL3   U4UQ71   N6TZG0   E2BMP7   A0A151JSX5   A0A088AHG4   A0A310SD58   A0A2A3EA97   V9IC47   A0A158NNY6   A0A195EX40   A0A0L7RJ49   A0A195BRZ0   A0A151WJR2   A0A151I741   A0A0M8ZR02   A0A067RVD1   A0A336MZ72   A0A336MY31   A0A154NZL2   E2A3I3   A0A0C9QZY0   V9IBP7   A0A026WQV2   A0A1B6KH09   V5GVQ9   A0A3L8DNH2   A0A1B6KA32   A0A034V710   W8BJ41   A0A1I8P291   A0A0K8WEI7   A0A034V5X6   A0A0Q9W5A0   A0A0Q9XHU0   A0A069DX92   A0A1B6KFH0   A0A162PAC4   A0A1I8MAI8   A0A0P5FGT4   A0A0P5LIW4   A0A0P4Y8N3   A0A0P5RL61   A0A0P5L4A7   A0A023F323   A0A0P5UT05   A0A0P5K5W5   A0A0P5S311   A0A0P4VVG7   A0A0P5M5Z3   A0A0P5QL63   A0A0P5V1A9   A0A1B6DCG0   A0A1B6EBL2   A0A0P5JXC0   A0A0M4ELJ9   A0A0P5Q222   A0A0N7ZLN4   A0A224X6N6   A0A0P5ZKD5   A0A0P5WL16   A0A0P4YBY6   A0A0P5UXG7   A0A1B6LEL7   A0A0P4ZAN7   A0A0P5Y338   A0A0P5W1W3   A0A0P5V6F3   A0A0P5IXL4   A0A0P5FX13   A0A1A9XB69   A0A1B0BV46   A0A0P5IRU2   A0A0N8BSF0  

Pubmed

19121390    26354079    22118469    28756777    18362917    19820115    + More
23537049    20798317    21347285    24845553    24508170    30249741    25348373    24495485    17994087    26334808    25315136    25474469    27129103   

EMBL

BABH01014136    BABH01014137    NWSH01000078    PCG79848.1    KQ459597    KPI94760.1    + More
PCG79849.1    PCG79851.1    AGBW02008206    OWR54023.1    PCG79853.1    ODYU01005438    SOQ46285.1    GDQN01007985    JAT83069.1    KZ150098    PZC73580.1    KQ971354    EFA07054.2    KB632319    ERL92286.1    APGK01045628    KB741037    ENN74670.1    GL449285    EFN83032.1    KQ978538    KYN30251.1    KQ775960    OAD52223.1    KZ288310    PBC28638.1    JR037942    AEY58046.1    ADTU01021786    KQ981953    KYN32467.1    KQ414583    KOC70776.1    KQ976417    KYM89797.1    KQ983031    KYQ48109.1    KQ978438    KYM93964.1    KQ435969    KOX67863.1    KK852442    KDR23839.1    UFQS01002555    UFQT01002555    SSX14262.1    SSX33677.1    UFQT01003532    SSX35090.1    KQ434786    KZC05109.1    GL436428    EFN72047.1    GBYB01006247    GBYB01006485    JAG76014.1    JAG76252.1    JR037943    AEY58047.1    KK107128    EZA58410.1    GEBQ01029251    JAT10726.1    GALX01004138    JAB64328.1    QOIP01000006    RLU21957.1    GEBQ01031669    JAT08308.1    GAKP01021412    JAC37540.1    GAMC01016947    GAMC01016946    GAMC01016945    GAMC01016943    JAB89609.1    GDHF01002726    JAI49588.1    GAKP01021411    GAKP01021410    JAC37542.1    CH940648    KRF80093.1    CH933808    KRG04414.1    GBGD01000374    JAC88515.1    GEBQ01029808    JAT10169.1    LRGB01000512    KZS18674.1    GDIP01148083    JAJ75319.1    GDIQ01168960    JAK82765.1    GDIP01233262    JAI90139.1    GDIQ01099176    JAL52550.1    GDIQ01200144    JAK51581.1    GBBI01003201    JAC15511.1    GDIP01108777    JAL94937.1    GDIQ01190301    JAK61424.1    GDIQ01102079    JAL49647.1    GDKW01000029    JAI56566.1    GDIQ01184254    JAK67471.1    GDIQ01115672    JAL36054.1    GDIP01106376    JAL97338.1    GEDC01031379    GEDC01017183    GEDC01013925    GEDC01011810    JAS05919.1    JAS20115.1    JAS23373.1    JAS25488.1    GEDC01002034    GEDC01000644    JAS35264.1    JAS36654.1    GDIQ01192192    JAK59533.1    CP012524    ALC42467.1    GDIQ01120221    JAL31505.1    GDIP01233265    JAI90136.1    GFTR01008301    JAW08125.1    GDIP01055936    JAM47779.1    GDIP01084780    JAM18935.1    GDIP01229677    JAI93724.1    GDIP01108779    JAL94935.1    GEBQ01017845    JAT22132.1    GDIP01215514    JAJ07888.1    GDIP01063693    JAM40022.1    GDIP01106377    JAL97337.1    GDIP01106378    JAL97336.1    GDIQ01206190    JAK45535.1    GDIQ01250477    JAK01248.1    JXJN01021142    GDIQ01208850    JAK42875.1    GDIQ01149459    JAL02267.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000007266    UP000030742    + More
UP000019118    UP000008237    UP000078492    UP000005203    UP000242457    UP000005205    UP000078541    UP000053825    UP000078540    UP000075809    UP000078542    UP000053105    UP000027135    UP000076502    UP000000311    UP000053097    UP000279307    UP000095300    UP000008792    UP000009192    UP000076858    UP000095301    UP000092553    UP000092443    UP000092460   

PRIDE

H9IZF8   

Pfam

PF08235   LNS2        + More
PF16876   Lipin_mid
PF04571   Lipin_N

Interpro

IPR036412   HAD-like_sf        + More
IPR031703   Lipin_mid       
IPR013209   LNS2       
IPR031315   LNS2/PITP       
IPR026058   LIPIN       
IPR007651   Lipin_N       
IPR023214   HAD_sf       
IPR036915   Cyclin-like_sf       

SUPFAM

SSF56784   SSF56784        + More
SSF47954   SSF47954       

Gene 3D

3.40.50.1000    

ProteinModelPortal

H9IZF8   A0A2A4K7D8   A0A194PUE7   A0A2A4K6Z7   A0A2A4K6I6   A0A212FJV5   + More
A0A2A4K7V5   A0A2H1VZL6   A0A1E1W7Z0   A0A2W1BLJ4   D6WRL3   U4UQ71   N6TZG0   E2BMP7   A0A151JSX5   A0A088AHG4   A0A310SD58   A0A2A3EA97   V9IC47   A0A158NNY6   A0A195EX40   A0A0L7RJ49   A0A195BRZ0   A0A151WJR2   A0A151I741   A0A0M8ZR02   A0A067RVD1   A0A336MZ72   A0A336MY31   A0A154NZL2   E2A3I3   A0A0C9QZY0   V9IBP7   A0A026WQV2   A0A1B6KH09   V5GVQ9   A0A3L8DNH2   A0A1B6KA32   A0A034V710   W8BJ41   A0A1I8P291   A0A0K8WEI7   A0A034V5X6   A0A0Q9W5A0   A0A0Q9XHU0   A0A069DX92   A0A1B6KFH0   A0A162PAC4   A0A1I8MAI8   A0A0P5FGT4   A0A0P5LIW4   A0A0P4Y8N3   A0A0P5RL61   A0A0P5L4A7   A0A023F323   A0A0P5UT05   A0A0P5K5W5   A0A0P5S311   A0A0P4VVG7   A0A0P5M5Z3   A0A0P5QL63   A0A0P5V1A9   A0A1B6DCG0   A0A1B6EBL2   A0A0P5JXC0   A0A0M4ELJ9   A0A0P5Q222   A0A0N7ZLN4   A0A224X6N6   A0A0P5ZKD5   A0A0P5WL16   A0A0P4YBY6   A0A0P5UXG7   A0A1B6LEL7   A0A0P4ZAN7   A0A0P5Y338   A0A0P5W1W3   A0A0P5V6F3   A0A0P5IXL4   A0A0P5FX13   A0A1A9XB69   A0A1B0BV46   A0A0P5IRU2   A0A0N8BSF0  

KEGG

101745494    K15728 phosphatidate phosphatase LPIN [EC:3.1.3.4] | (RefSeq) phosphatidate phosphatase LPIN3

PATHWAY

00561    Glycerolipid metabolism - Bombyx mori (domestic silkworm)
00564    Glycerophospholipid metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0045944   GO:0009062   GO:0003713   GO:0008195   GO:0019432   GO:0005634   GO:0032869  

PANTHER

PTHR12181  

Length:

968

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02468

Exp number, first 60 AAs:

0.01899

Total prob of N-in:

0.00097

outside

1  -  968

 

 

Pi

235.223511

Theta

184.388082

Tajima's D

0.47162

CLR

1.005342

CSRT

0.506874656267187

Interpretation

Uncertain