Gene

KWMTBOMO02633

Pre Gene Modal

BGIBMGA002641

Annotation

GPI_transamidase_component_PIG-T_[Papilio_xuthus]

Location

Bomo_Chr5(+):7602678-7604763      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.453

CDS

ATGTATGTGTTAGTAAATGATAACCTGTCATCCGAGCACACCTATTTAGCACCTAGGTCTTTGGTGGAAGTGTTGACACGATTCCAAGTTGATGAACTGCATTTCACACTAACCGAGGGGCAGTGGAGGCATAATCATTGGGGTTATCCTGTGCTTGATGCAGCTCCTGGAGCAGAACTATACGCTTGGTTTTCCTCAGATGTGGAAAATGTTGATACACAATGGAAAAAATTAAGTTCCACCCTTGCAGGACTGTTCTGTGCATCTTTAAATTTTATTGAAGATTTCAACACTATAACACCTCAAATGGCATTACAACCGACCGGTGCTATACCACAAAATCCTAATATAACATCACAGTTACGCTATGCTTCTCTGCCTAGAGAAATTGTATGCACAGAAAACTTAACACCATGGAAGAAACTTCTTCCTTGTGAATCTAGTAGAGGGCTTTCAGCATTGTTAAACTCAAGAATGATACACAATACCAATTATCATTCTATTGGAGTTCATACAAGAAAAGTGTGTTCATCTAGTGATTGTTCAGTAGTGAGCCTAGAGATAAAGCAAACGGTAGCTTTGGTTTATGATTCTAAGATTATTCGAACCACTGATTGGTCTTTTACTAAATTATTTGGCCAAGGGTTGCCTGGTGGATGCCCTCTTGCATCAAGTAGCAAAGTGTATGTAGATATCACCACCAATGATACCCAGCCATTCCTTCTATCTCCAGAGCCAGAAAAGGTTCTACTGTCACAGCGAGGAGGCAGTGAAACAAAACTTGCTCTGTACACAATTAAACCTGAAAACAAAATGACTACTATTGGAGCCAAATATATCAGTAAGAAAGATTTGGTTCTTATGAAACTGCCCCCACTTTATTTCAATCGTTATGTATTAGGTTATGGAAAGGAATTTGGAGGTATTGTGACTGAACTGACCAATACTTTTTGGTCCTCCATTGATGTTGTTGTATTGCAGAATGCGCCTTGGTGGTTGCCTATTCAATTAAGCTCTTTAAGAATCAACGGGGAAGCGTCAAGTGAGATGGTGTTAGCTAGGCATTATTCACCTGGGCGTAGCAGACAAAAACCTTATCACTTGGAGTTACTGCTGAGGCTACCACCTAAGTCAGCAACTAAGATAACTATTGATTTTGAATTCGTATTCTTAAAATGGCAAGAGTATCCACCAGATGCTAATCATGGCTTTTATGTTGGGTCAGCAATAATAACTGCTAATTTACCAACAGCAAGAAATTATACTAGTTTACCAGGGACTGCAAGCTTATTTGAATCTTCAATTAATGCATCAAAACCATGGTATCCTGCAGTATTTCGTACTAATGGTGTGATGGTATCATTACCAACACCAGACTTCAGTATGCCATATAATGTGATATGTCTTGCTTGTACAGTTGTGGCCCTTGCTTTTGGACCTCTGCATAATATTTGTACAAAAGAATTAGTTCTCAAAGTTGTTGGTTCTTCTGTTACTTTAAAACAAAAGATTATTAATTTATTTAAAAAGAAAAAGGAGTGA

Protein

MYVLVNDNLSSEHTYLAPRSLVEVLTRFQVDELHFTLTEGQWRHNHWGYPVLDAAPGAELYAWFSSDVENVDTQWKKLSSTLAGLFCASLNFIEDFNTITPQMALQPTGAIPQNPNITSQLRYASLPREIVCTENLTPWKKLLPCESSRGLSALLNSRMIHNTNYHSIGVHTRKVCSSSDCSVVSLEIKQTVALVYDSKIIRTTDWSFTKLFGQGLPGGCPLASSSKVYVDITTNDTQPFLLSPEPEKVLLSQRGGSETKLALYTIKPENKMTTIGAKYISKKDLVLMKLPPLYFNRYVLGYGKEFGGIVTELTNTFWSSIDVVVLQNAPWWLPIQLSSLRINGEASSEMVLARHYSPGRSRQKPYHLELLLRLPPKSATKITIDFEFVFLKWQEYPPDANHGFYVGSAIITANLPTARNYTSLPGTASLFESSINASKPWYPAVFRTNGVMVSLPTPDFSMPYNVICLACTVVALAFGPLHNICTKELVLKVVGSSVTLKQKIINLFKKKKE

Uniprot

H9IZF6   A0A2W1BIR9   A0A2A4JUH8   A0A194PW08   A0A2H1VA38   A0A194RKY8   + More
A0A212FJX6   A0A0L7LA77   S4P9E8   D6WNG8   A0A154PII7   A0A1B6KKU4   F4WPY1   A0A1B6FRL9   V5H517   A0A088AUU2   A0A151JCA0   A0A2P8XFW3   A0A2A3E5Y7   A0A232F7G1   A0A151IEA7   K7IN57   A0A151K117   E9ILJ1   A0A151X350   A0A195B5U8   A0A2J7QF02   A0A158NV77   A0A0L7QL77   A0A0C9Q8B3   A0A310SRS7   A0A026WQZ5   A0A067R9L5   E2BTC6   A0A0M8ZZ03   A0A1Y1N965   A0A3L8DN17   U4TZ18   N6TL60   J3JVR4   A0A1B6C6L0   A0A1L8E420   R4WSB2   E0VQA3   A0A2K8JMM0   T1I589   A0A224XLF8   A0A0P4VUU9   A0A1W4XUV2   A0A0A9XUB7   A0A0A9XR98   A0A0K8T9S2   A0A182M716   A0A182YCH1   A0A0A1WEV3   A0A1A9VNM5   A0A034WF00   A0A0K8V2J9   A0A182VFG7   A0A182WRS7   A0A182L021   A0A1B0GBL6   A0A1B0A7P6   A0A182QF72   A0A1B0BBF6   A0A1B0BQS7   A0A1A9XX19   A0A182IBS5   A0A182U1V3   Q7Q8M6   A0A084VU19   A0A182NT74   A0A1S4GYK8   A0A182P4N0   B0XEI9   A0A182IZW0   Q16Q98   A0A1S4FT32   A0A1A9X5E4   A0A2M4BHR6   T1P9B1   A0A0L0CJU9   A0A1Q3FBX1   A0A2M3Z2V1   W8BUW0   A0A182VSH4   A0A2M3ZDZ6   A0A2M4AH00   A0A2M4AHF1   A0A2M4AGU8   W5JG22   A0A182K772   A0A182RWC8   A0A1I8Q3L2   A0A1J1IQG9   A0A182FNB1   T1J0L8   B4L8M6   B4JLL6   B4M1W0  

Pubmed

19121390    28756777    26354079    22118469    26227816    23622113    + More
18362917    19820115    21719571    29403074    28648823    20075255    21282665    21347285    24508170    24845553    20798317    28004739    30249741    23537049    22516182    23691247    20566863    27129103    25401762    25244985    25830018    25348373    20966253    12364791    24438588    17510324    25315136    26108605    24495485    20920257    23761445    17994087   

EMBL

BABH01014142    KZ150098    PZC73584.1    NWSH01000598    PCG75426.1    KQ459589    + More
KPI97512.1    ODYU01001466    SOQ37699.1    KQ460207    KPJ16641.1    AGBW02008206    OWR54026.1    JTDY01002026    KOB72299.1    GAIX01005521    JAA87039.1    KQ971343    EFA03225.1    KQ434926    KZC11686.1    GEBQ01027900    JAT12077.1    GL888256    EGI63749.1    GECZ01016914    JAS52855.1    GALX01000568    JAB67898.1    KQ979060    KYN23171.1    PYGN01002287    PSN30900.1    KZ288356    PBC27173.1    NNAY01000810    OXU26388.1    KQ977901    KYM98897.1    KQ981189    KYN45250.1    GL764087    EFZ18562.1    KQ982577    KYQ54638.1    KQ976595    KYM79645.1    NEVH01015305    PNF27160.1    ADTU01026947    ADTU01026948    ADTU01026949    ADTU01026950    ADTU01026951    KQ414934    KOC59345.1    GBYB01010468    JAG80235.1    KQ759866    OAD62487.1    KK107128    EZA58388.1    KK852655    KDR19304.1    GL450389    EFN81047.1    KQ435794    KOX73990.1    GEZM01009645    JAV94433.1    QOIP01000006    RLU21845.1    KB631868    ERL86829.1    APGK01032729    KB740848    ENN78703.1    BT127332    AEE62294.1    GEDC01028191    JAS09107.1    GFDF01000812    JAV13272.1    AK417587    BAN20802.1    DS235408    EEB15559.1    KY031140    ATU82891.1    ACPB03008476    GFTR01007443    JAW08983.1    GDKW01002007    JAI54588.1    GBHO01021111    JAG22493.1    GBHO01021110    JAG22494.1    GBRD01003537    JAG62284.1    AXCM01002684    GBXI01017081    JAC97210.1    GAKP01005683    JAC53269.1    GDHF01019162    JAI33152.1    CCAG010001819    AXCN02000727    JXJN01011422    JXJN01018767    APCN01000732    AAAB01008944    EAA10074.3    ATLV01016628    KE525098    KFB41463.1    DS232835    EDS26016.1    CH477756    EAT36563.1    GGFJ01003441    MBW52582.1    KA645317    AFP59946.1    JRES01000292    KNC32683.1    GFDL01009971    JAV25074.1    GGFM01002089    MBW22840.1    GAMC01003593    JAC02963.1    GGFM01006005    MBW26756.1    GGFK01006740    MBW40061.1    GGFK01006717    MBW40038.1    GGFK01006694    MBW40015.1    ADMH02001323    ETN63016.1    CVRI01000056    CRL01788.1    JH431738    CH933815    EDW08001.1    CH916370    EDW00469.1    CH940651    EDW65664.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000007266    UP000076502    UP000007755    UP000005203    UP000078492    UP000245037    UP000242457    UP000215335    UP000078542    UP000002358    UP000078541    UP000075809    UP000078540    UP000235965    UP000005205    UP000053825    UP000053097    UP000027135    UP000008237    UP000053105    UP000279307    UP000030742    UP000019118    UP000009046    UP000015103    UP000192223    UP000075883    UP000076408    UP000078200    UP000075903    UP000076407    UP000075882    UP000092444    UP000092445    UP000075886    UP000092460    UP000092443    UP000075840    UP000075902    UP000007062    UP000030765    UP000075884    UP000075885    UP000002320    UP000075880    UP000008820    UP000091820    UP000095301    UP000037069    UP000075920    UP000000673    UP000075881    UP000075900    UP000095300    UP000183832    UP000069272    UP000009192    UP000001070    UP000008792   

PRIDE

H9IZF6   

Pfam

PF04113   Gpi16        + More
PF12400   STIMATE
PF03091   CutA1

Interpro

IPR007245   PIG-T        + More
IPR011322   N-reg_PII-like_a/b       
IPR004323   Ion_tolerance_CutA       
IPR015867   N-reg_PII/ATP_PRibTrfase_C       
IPR022127   STIMATE/YPL162C       

SUPFAM

SSF54913   SSF54913       

Gene 3D

3.30.70.120    

ProteinModelPortal

H9IZF6   A0A2W1BIR9   A0A2A4JUH8   A0A194PW08   A0A2H1VA38   A0A194RKY8   + More
A0A212FJX6   A0A0L7LA77   S4P9E8   D6WNG8   A0A154PII7   A0A1B6KKU4   F4WPY1   A0A1B6FRL9   V5H517   A0A088AUU2   A0A151JCA0   A0A2P8XFW3   A0A2A3E5Y7   A0A232F7G1   A0A151IEA7   K7IN57   A0A151K117   E9ILJ1   A0A151X350   A0A195B5U8   A0A2J7QF02   A0A158NV77   A0A0L7QL77   A0A0C9Q8B3   A0A310SRS7   A0A026WQZ5   A0A067R9L5   E2BTC6   A0A0M8ZZ03   A0A1Y1N965   A0A3L8DN17   U4TZ18   N6TL60   J3JVR4   A0A1B6C6L0   A0A1L8E420   R4WSB2   E0VQA3   A0A2K8JMM0   T1I589   A0A224XLF8   A0A0P4VUU9   A0A1W4XUV2   A0A0A9XUB7   A0A0A9XR98   A0A0K8T9S2   A0A182M716   A0A182YCH1   A0A0A1WEV3   A0A1A9VNM5   A0A034WF00   A0A0K8V2J9   A0A182VFG7   A0A182WRS7   A0A182L021   A0A1B0GBL6   A0A1B0A7P6   A0A182QF72   A0A1B0BBF6   A0A1B0BQS7   A0A1A9XX19   A0A182IBS5   A0A182U1V3   Q7Q8M6   A0A084VU19   A0A182NT74   A0A1S4GYK8   A0A182P4N0   B0XEI9   A0A182IZW0   Q16Q98   A0A1S4FT32   A0A1A9X5E4   A0A2M4BHR6   T1P9B1   A0A0L0CJU9   A0A1Q3FBX1   A0A2M3Z2V1   W8BUW0   A0A182VSH4   A0A2M3ZDZ6   A0A2M4AH00   A0A2M4AHF1   A0A2M4AGU8   W5JG22   A0A182K772   A0A182RWC8   A0A1I8Q3L2   A0A1J1IQG9   A0A182FNB1   T1J0L8   B4L8M6   B4JLL6   B4M1W0  

KEGG

101745780    K05292 GPI-anchor transamidase subunit T | (RefSeq) GPI transamidase component PIG-T

PATHWAY

00563    Glycosylphosphatidylinositol (GPI)-anchor biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016255   GO:0042765   GO:0016021   GO:0010038   GO:0006511   GO:0006812   GO:0015299   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

PANTHER

PTHR12959  

Length:

513

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

10.86686

Exp number, first 60 AAs:

0.0003

Total prob of N-in:

0.00327

outside

1  -  513

 

 

Pi

180.251915

Theta

164.766156

Tajima's D

0.228413

CLR

0.014419

CSRT

0.436578171091445

Interpretation

Uncertain