SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02629
Pre Gene Modal
BGIBMGA002658
Annotation
PREDICTED:_uncharacterized_protein_LOC101746312_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 3.056
 

Sequence

CDS
ATGGCCGTTTGTGGTCTTAGAACTGTATTACTCATCGTTTGTATACTTGAATTGATAATTACTATTCAAAGACAGGTCTTTGATTTTTTAGGATACATGTGGCTGCCCATCATAACTAATTTTCTTAATATTCTACTTATAATTTTCGGATCGTTTGGTGCAGTACAATGCATCACAAAGTACCTAATAGCGTATGCTGTATGGAGTTTTATGTGGATGGTGTGGAATATCTTCCTTATATGCTACTATCTAAACCTGGGCACTTTAAATAGGGAAAGTGGTTTATTATCATTGGGTACTGGTAGTGTTAGTTGGTGGGAAAGCAATGGATGGGGCTGTCAGCCAGAATGGGGAGAATTGGACAGACCTGGTCTATGGAGGCCGACTCATGTTGAAGGCTGCCACTTCCAATGGTATCATGTTGAATTGGGACAGTCTGTACTTGGTGCCATTTTTGCTGCCACTGCTATACCTCTTGCCACCATTTTAGCCATTAAGTCATACAAGAAAAAGACGAAATCAGATAAAGGTACAATATCCCGCAGACCAGTTTATACAATAGAATTAAGTCCAGCTGAAACTAACGTAAGTGAAAGTAGTTTGAAACCAATGACACCCCGTCGAGTCAAGCGTCGATCGGGCTCCCGAGGTAATAGTTCGTCAGTTCGTAGGTCGCGACGGTCTTACAGGAATGCTGGTTATTCAGCTTCAACAGGATCCTTACCCCGTGAACCACGATCGAGACCAACATCTGCACATTCGTCATATTCGAATTTTCATGGAACACGCCCAGTTTCATACCATGTACCTCGTAATGAAGAAACTGTTTCGGAAATTGTTAACAACGCATATGAGCCTGCACCGCAAGTTGAATCAGTACCGATTGTCGTTAACAGAAACAATACTATAGGTCGGAGCAGCATAAAATCTTCCGGTTACGATGTGGCTGGGCCATATAAAGAGCCGAAATCGGTGCGAACGTACGATTCAAAACCTTTGAGTAATTACGACGCGAAATACGATACAAATTCGGCAAGAAATTATAATACCAACGTTCCCACTTATGACAACATCGAAAATGTTTATGACAGAGGTCAGATGAACACCAATTATGATGGAAGGATAGATACCGTTGGCGGTTGTGAGTCTCCTTCGTACGGATACGGCGACAGCGAATGGCCGCCCCCGCCCGCTCCCCCATACAGCGCGCGAGCCACGCCGCAGGCACCAGGTCCCCCGGCCTATCAACCTGTCAACGACCTATATAACATGGCACCATGA
Protein
MAVCGLRTVLLIVCILELIITIQRQVFDFLGYMWLPIITNFLNILLIIFGSFGAVQCITKYLIAYAVWSFMWMVWNIFLICYYLNLGTLNRESGLLSLGTGSVSWWESNGWGCQPEWGELDRPGLWRPTHVEGCHFQWYHVELGQSVLGAIFAATAIPLATILAIKSYKKKTKSDKGTISRRPVYTIELSPAETNVSESSLKPMTPRRVKRRSGSRGNSSSVRRSRRSYRNAGYSASTGSLPREPRSRPTSAHSSYSNFHGTRPVSYHVPRNEETVSEIVNNAYEPAPQVESVPIVVNRNNTIGRSSIKSSGYDVAGPYKEPKSVRTYDSKPLSNYDAKYDTNSARNYNTNVPTYDNIENVYDRGQMNTNYDGRIDTVGGCESPSYGYGDSEWPPPPAPPYSARATPQAPGPPAYQPVNDLYNMAP

Summary

Pfam
PF05640   NKAIN
Interpro
IPR008516   Na/K-Atpase_Interacting       

Ontologies

Topology

Length:
426
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
87.0763200000002
Exp number, first 60 AAs:
42.97421
Total prob of N-in:
0.98802
POSSIBLE N-term signal
sequence
inside
1  -  4
TMhelix
5  -  27
outside
28  -  31
TMhelix
32  -  54
inside
55  -  60
TMhelix
61  -  83
outside
84  -  142
TMhelix
143  -  165
inside
166  -  426
 
 

Population Genetic Test Statistics

Pi
286.061732
Theta
235.194925
Tajima's D
0.783786
CLR
0.114846
CSRT
0.6011199440028
Interpretation
Uncertain
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