Silkworm Genome Informatics Database

Gene

KWMTBOMO02628 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002639

Annotation

PREDICTED:_aspartyl/asparaginyl_beta-hydroxylase_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr5(+):7558158-7572827 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.371

CDS

ATGTCAGGCGACGTACAACCAAGGAAACGTAAAGATAAACGGAAAAAGAAAGATGAAATAAACGTAGACGAGCCTCGTGGTACTGCAGCAGCTCTAGGTGAAGGAGATGTCTTCCTACACTCTCAACATGATCATGGCACGGGTGGTCACTGGTGTGCTAAAATAATTTTCTTCTCTCTGCTAGCAGTCCTTGTAACACTTATTGGGTTGATCATCCTGGAAAATCGAGGTCTTACAGAGTTAGAGGCAAACTCAGTTGAGTCAAGATATTCAGGAGTCTTAGATGGTTGGATAGAAGATGCACCAGATGATCACCATGATGAACAAACATTGGATTTGAAGCATCATGATGATAACGGTGATGATCGAGAAGACCAAAGTAATGAGCTAGAAGAAGAATTTGATGAAAGTAATCACAGTGCTGAAGACGATCAAAAGGAAGACGGCACGCATAGTGACGAAGAGGATACTGAAAAAACCAGTGAAGAAATCAACAATGTCGACGATGAAGACAATGAAAGTGAAGAGCAAGACATAGATGAACTTGATGAGGATGTAAATGAACACGAGCAGTCTTACGATAGCAACGAAAACGATGATGATAGCGAAAATGAAGATTTACAATCTGCTGATGACGATTATCAATCAACAGAACAAAAATACAACTATCAGTGGGTCGAACAGAAAGAAGAAGAATCACAATCGATTGAAGAACTCGATGATAATAATCGATCGATCGAACAAAATGACGAAGATAAATCATTTGAACAAAATGATGATGTATCCAAACAAGACGATCAAAGTGGACAAACAGACGAATATGAAGATAAACATGACAGTGCTGAATATCCTGAAGAAGAAAGCGATGAGGAAGATGACCATCTCGAAGACAATGTTCAAGAGGATTCCGAAGTGGAAGTGGAAAGAATCGAGAGAGAAGTGTCAGACGAAGAACTCCAACAGGAATTATCTTCAAACGAAGTAAACGCACCTGTCCAAAAAAGTGAAGAAAAAATCGATGGCGGAAAACCTGAAGATGAAGTCGAGGACTCTGTAGAAGACGATGAAGATGAATTTTTAGAACCTGAAGATATCGAAGAATCGCCTGTAGTGGAACATATCACAGCACCCGCAGGGAAACCTTTGCCTGAGTTGGAGGATGACATTTCAACTGAAAAGCCGATCAACAGTTTGACCGAAGAAGACGAATATGAGAAGCAACAAGAACAACTGCGCCTTGAGAAGGAACAAGCGTCGCACATGTGGCTGAAAGTGGTGGTCGGTGCAGCGTTACTGGTCGCCACGCACGCAGTCGTGCGGCGCGCCACTGCGTCACGCGAGACGGATAACATATACGAACATATGGCGAGAGAGGAAACACCATCTTTAATCGATAGACGAATGACTCTAATACTTGAAGAACAACATTCAGAGGTGCCGGTTGAGGTTCCAACAGACTATTCGTTACCTCCTGTCGTTGAAAGAGAGGTCGATGAGAAAAACGTTGGTACACAAAAATCCACACCAATTAAAAGTCAACTCAACGTAGATGAAGAGGTTGAAGACACGCCTGCTCCTGAGGTGATTGAAACACAAGACGAGGTAGATAAAGAGTTGTACAGCGATGAGGATGAACTTGACGAGGAATTGATTGAAGAAAAAATAGATACACCCAAAGAGGTTACACCCGTAGAAACGCACAAAGCTGAGGAACAAATCGCGGATTCCGAAGAAGATCCTGACGACGTCGAAATAATCGACGAAGAACTGGAAGAAGAATTGATTGAGGAAGAAGAAATATCCGATGTTGATGACGCAGAACTTTTGAGTAGGCTCGAAGCAAAATATGGCCGACTCCCAGAACCCGACCGACCGAAACAAACTAAAGATGGTGGGGACAGCCTAGATGACGATTGGCCGGGCGAACCTAGCGAGAGCTACTGGCGCCAGCAACTGGACCAAGCCGAACAGGACTTGAGACAGGGCGAGTGGAGCGCTGCGCTGGGTCGAGTCAGCGCGCCGAGCCTCCAGACCAGCGCCCGCGCTCGGTACGTAAAAGCGCGGGCACTGGACGCAACGGCCGAAGCTCGGCGCGACAATAGACTGCTTTCGCAAGCTATAGCCGCGTATATCGACCTACTCAAGATGAACGAGCGTCTCTCGGATAAGAAGTTAATCGAAGTTACTGACAGAACACTAGAAAGAATCAAATTCAGAGGAACATATCTGAGTGCTGAGCCTGTTTACAAACTATTGATTCGACGATTTCCGGACAATCCGAACTATCGAAATAATTTGACTGTTTCGTTATTAATGGCAAACAGGGCTGATCTAGCGGAAACCGTTTTAAAGGAAACTTTAAAGCGTTGGCCTAACGACCACGTCGCATTGGCTCATCTTGGCTTCATCCTGAAAATCAGTTATAACCGTTTAGAAGAAGCAGTAGATGCATTCAAGAAAGCTTTAGAGGATCAAACTGGGCCCGCTAACGAACCGCGTTTTTACTACCACTACGGCGACGCATTACTGTTATTAGGAAGGTTCAATGAGGCCCACGAAGTTCACAAACGCGGCGCAGCTCTAGGCCACTTCTTATCGCCGAATCAGCGTTCATTATACAACGTGGAGCGATTAAAAAGTAAACCCTGGTGGAACGTAGAAAACACACCCTACACAAAATTGGCACGTGCATTAGAACGCTCGTGGAGGCAAATTCTAGAAGAAGGTGAAAGCTTACGAGCGTTGTATGAAAAAGAAAAAGAGGGTTTAAAAGAACGCGGAGAATGGTCACAATTGGATTTGTTCGCGCGCGGTTCTGAAATACCGGGAAGATGCAAAAAGGCTCCAGTGACTTGTTCTATAGTGCGGCAAGAAGTAGCCGCGGCCGGATGTCGTCGAGGACAGATCAAGTTCAGCGCAATGGAAGCGGGCACCCACGTCAGACCGCACGTGGGACCCACTAATTGTCGCCTGCGAATGCATTTAGGACTGAGCAACACCAAAGATACTTATATAAGAGTGGACAAAGAGACCAGGCAGTGGCAGACCGGCAAGGTGCTCTTGTTTGATGACAGCTTCGAACACGAGGTGTGGCACAATGGCACCGGTACTCGTCTAGTGCTCATTGTCGACGTGTGGCACCCGGACCTTACGCCTACCGAGAGGCGACAATTACCTGCTATTTAA

Protein

MSGDVQPRKRKDKRKKKDEINVDEPRGTAAALGEGDVFLHSQHDHGTGGHWCAKIIFFSLLAVLVTLIGLIILENRGLTELEANSVESRYSGVLDGWIEDAPDDHHDEQTLDLKHHDDNGDDREDQSNELEEEFDESNHSAEDDQKEDGTHSDEEDTEKTSEEINNVDDEDNESEEQDIDELDEDVNEHEQSYDSNENDDDSENEDLQSADDDYQSTEQKYNYQWVEQKEEESQSIEELDDNNRSIEQNDEDKSFEQNDDVSKQDDQSGQTDEYEDKHDSAEYPEEESDEEDDHLEDNVQEDSEVEVERIEREVSDEELQQELSSNEVNAPVQKSEEKIDGGKPEDEVEDSVEDDEDEFLEPEDIEESPVVEHITAPAGKPLPELEDDISTEKPINSLTEEDEYEKQQEQLRLEKEQASHMWLKVVVGAALLVATHAVVRRATASRETDNIYEHMAREETPSLIDRRMTLILEEQHSEVPVEVPTDYSLPPVVEREVDEKNVGTQKSTPIKSQLNVDEEVEDTPAPEVIETQDEVDKELYSDEDELDEELIEEKIDTPKEVTPVETHKAEEQIADSEEDPDDVEIIDEELEEELIEEEEISDVDDAELLSRLEAKYGRLPEPDRPKQTKDGGDSLDDDWPGEPSESYWRQQLDQAEQDLRQGEWSAALGRVSAPSLQTSARARYVKARALDATAEARRDNRLLSQAIAAYIDLLKMNERLSDKKLIEVTDRTLERIKFRGTYLSAEPVYKLLIRRFPDNPNYRNNLTVSLLMANRADLAETVLKETLKRWPNDHVALAHLGFILKISYNRLEEAVDAFKKALEDQTGPANEPRFYYHYGDALLLLGRFNEAHEVHKRGAALGHFLSPNQRSLYNVERLKSKPWWNVENTPYTKLARALERSWRQILEEGESLRALYEKEKEGLKERGEWSQLDLFARGSEIPGRCKKAPVTCSIVRQEVAAAGCRRGQIKFSAMEAGTHVRPHVGPTNCRLRMHLGLSNTKDTYIRVDKETRQWQTGKVLLFDDSFEHEVWHNGTGTRLVLIVDVWHPDLTPTERRQLPAI

Uniprot

H9IZF4

Pubmed

19121390

EMBL

BABH01014146

Proteomes

UP000005204

PRIDE

H9IZF4

Pfam

PF05118 Asp_Arg_Hydrox

Interpro

IPR011990   TPR-like_helical_dom_sf        + More
IPR013026   TPR-contain_dom
IPR027443   IPNS-like
IPR039038   ASPH
IPR007803   Asp/Arg/Pro-Hydrxlase

SUPFAM

SSF48452 SSF48452

Gene 3D

1.25.40.10 2.60.120.330

ProteinModelPortal

H9IZF4

PDB

6RK9 E-value=3.70047e-81, Score=772

KEGG

101746449 K00476 aspartate beta-hydroxylase [EC:1.14.11.16] | (RefSeq) aspartyl/asparaginyl beta-hydroxylase

GO

GO:0042264 GO:0016021 GO:0004597 GO:0005515 GO:0018193 GO:0006812 GO:0015299 GO:0006631 GO:0006635 GO:0006281 GO:0048384

PANTHER

PTHR12366

Length:

1061

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.80228

Exp number, first 60 AAs:

8.00487

Total prob of N-in:

0.99387

inside

1 - 50

TMhelix

51 - 73

outside

74 - 1061

Pi

244.546299

Theta

208.635664

Tajima's D

0.447096

CLR

0.318325

CSRT

0.497375131243438

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics