Gene

KWMTBOMO02623

Pre Gene Modal

BGIBMGA002660

Annotation

Myrosinase_1_[Papilio_xuthus]

Location

Bomo_Chr5(-):7492931-7514587      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 0.718

CDS

ATGAGATTGATTTTAATCATAGCCTTTTTGTGTGAAGGATACGCTGAGATTGTCAATTTAGCTGGAGGAAAAAATACGAACTACAAGTTTCCAGAAAATTTCATATTTGGAGTATCTACAGCTGCTGCCCAAATAGAGGGCGCTTGGAATGTAGACGGTAAATCCGAAAGTATTTGGGATCATTTGGTGCACAAAAACCCCGAGTTCGTCAAAGATGGATCCAACGCGGACGTTGCATCAGATTCTTATCATTTATATAAGCGCGATGCTGAAATGGTTCACGAGCTCGGAGTTGATACATACAGATTTTCTGTATCGTGGCCCAGAATACTTCCTACAGGATTAACGAACGAAATCAATGAATTAGGAATTGCATACTACAATAATCTTATAAACGAAATTCTGAAATACAATATAACACCTATGATAACGATATATCATTGGGATTTGCCGCAAAAGCTACAGGACATCGGTGGATGGTCAAACGCGCACATTGTCGACTATTACACGGATTACGCTAAGATATTGTTTAAGAACTTTGGAGACAGAGTCAAGTACTGGATAACTTTCAATGAGCCGATGCAGACTTGTCTAGAAGGCTATGGGGGAACATATCGAGCGCCCGCATTAAATCGACATGGTCACGCTGAATACCTATGCACTCATAACTTACTTAAGGCACACGCTAATGTCTATCATCTGTTTGACAAAGAATATAGAACAGTAAACAAAGGAAAAATTGGTATTGCACTAGATTCTAACTGGGCTGAACCTAAGACAGATACTCAAGAAGACAGAGATGCAGCAGAGCTATATTTGCAAACACATGTCGGCTGGTACGCTCATCCGATTTATTCAGCGGAGGGTAATTATCCTCCCGCATTAATAAAGCTTGTGGACCAAAAAAGCAAAGAACAAAACTTTACTCGTTCCCGTTTGCCTAAATTCACAACAGAAGAGGTGGAATACATTAAAGGAACGGCTGATTTCTTTGGTCTGAATCATTACACAACATACCTGCTGACGATGGCGGATAAAGAAGTAGGTTCTATACCATCTCACCAGAACGATGTCGGAATCGTGAGGGTTCAAGATCCGAATTGGCCGTCAGAATCCTCTTCAACTTGGCTCAAGGTCGTGCCTTACGGATTCAGAAAACTTCTTCAATGGATAACGAAGACATACAGCGGCTATCCAATTATAGTTACCGAGAACGGCTACGCGGATTTCAATGGTCTCGATGATAAAACACGAGTGTCCTACTATAGTCATTATCTGAACGCGTTGTTACACAGTATTCACGAAGATGGAAGCGTTGTTGAAGGGTACTTCGCGTGGAGTTTGATGGACAACTTTGAATGGGATGACGGATATGTGTCCCGCTTCGGTCTGTATCTGGTCGATTTCGAAAGTCCCAACAAAACGAGAACGGCAAAGGATTCGGCCAAGCTGTACTCCAAGGTGATTGCGAGTCGACGCCTGCCCGAAGACTACAACCCCGACGACTTCTCCGCTTTCAACAGCGCCGGATCTCATTTCTGCTCGATCTTCATGCTGTTTCCACTAACAATTCATTGGCTATTTCGGTAA

Protein

MRLILIIAFLCEGYAEIVNLAGGKNTNYKFPENFIFGVSTAAAQIEGAWNVDGKSESIWDHLVHKNPEFVKDGSNADVASDSYHLYKRDAEMVHELGVDTYRFSVSWPRILPTGLTNEINELGIAYYNNLINEILKYNITPMITIYHWDLPQKLQDIGGWSNAHIVDYYTDYAKILFKNFGDRVKYWITFNEPMQTCLEGYGGTYRAPALNRHGHAEYLCTHNLLKAHANVYHLFDKEYRTVNKGKIGIALDSNWAEPKTDTQEDRDAAELYLQTHVGWYAHPIYSAEGNYPPALIKLVDQKSKEQNFTRSRLPKFTTEEVEYIKGTADFFGLNHYTTYLLTMADKEVGSIPSHQNDVGIVRVQDPNWPSESSSTWLKVVPYGFRKLLQWITKTYSGYPIIVTENGYADFNGLDDKTRVSYYSHYLNALLHSIHEDGSVVEGYFAWSLMDNFEWDDGYVSRFGLYLVDFESPNKTRTAKDSAKLYSKVIASRRLPEDYNPDDFSAFNSAGSHFCSIFMLFPLTIHWLFR

Similarity

Belongs to the glycosyl hydrolase 1 family.
Belongs to the histone H3 family.

Uniprot

H9IZH5   A0A194PVV9   A0A194R738   A0A2H1VWC6   A0A2A4JTU1   A0A212ERQ2   + More
A0A1W1EGM5   G9F9I1   A0A2A4JVJ5   A0A1L8DQN1   A0A194R3H3   G9F9G9   A0A1L8DQS5   A0A1L8DR18   B0WNN7   A0A182J2M6   A0A194R360   A0A182QI13   A0A182YP84   A0A0K2YR16   A0A1Y9GKT0   Q5TQY8   A0A182HAK7   A0A1Y9IRY8   A0A194PMT2   A0A2J7PTJ0   A0A182U0B4   Q16WF2   W8BL15   A0A034VEY7   A0A034VAL4   A0A182HAK9   B2DBM6   A0A0A1XS57   A0A1S4G3W5   Q16ET6   A0A194PPG4   A0A0A1XAG3   A0A182G2R0   A0A182HAK8   T1PC49   A0A194PPG9   A0A182G2Q9   A0A1Y9IRG1   A0A1Y9IW73   A0A1Q3FY94   A0A0K8UIW8   B0WNN5   A0A1Y9J0G9   A0A1Y9GKS9   A0NES8   A0A1Q3FR87   A0A336MAL5   Q16WF4   A0A212EKQ3   A0A182LL19   H9JLY4   H9JLY5   A0A219WGQ6   A0A1Y9IW90   A0A067R309   A0A0K8W4X1   A0A1W4XAC4   A0A0K8W3Q7   A0A212FF90   A0A1J1IDZ4   A0A212FF93   A0A2M4CLR8   A0A182LL23   B4MM56   A0A1S4G3C1   Q16ET7   A0A182QNT7   J9Z300   A0A1W4UV58   A0A212EXF5   G9F9I0   A0A2M4CZ21   A0A059WHP2   A0A2H1VF65   A0A2M3ZET6   A0A2A4JPS5   A0A182G2R1   A0A182JLR1   A0A182HAL0   A0A2M4BKN2   W5JN46   Q16WF3   A0A1A9W4X6   A0A1B0C2P0   G9F9I3   A0A194R3H6   A0A084VCJ7   A0A194PNR8   Q8T0W7   W5JPP3   A0A1Y9J100   A0A212FBG8   A0A1A9UP13   A0A0M4E0Q2  

Pubmed

19121390    26354079    22118469    28680679    25244985    26940001    + More
12364791    14747013    17210077    26483478    17510324    24495485    25348373    18712529    25830018    20966253    24845553    17994087    20920257    23761445    24438588    12429120    20682343    22751668   

EMBL

BABH01014157    KQ459589    KPI97521.1    KQ460870    KPJ11681.1    ODYU01004836    + More
SOQ45125.1    NWSH01000598    PCG75431.1    AGBW02012985    OWR44134.1    LT635664    SGZ49394.1    JN033726    AEW46879.1    PCG75430.1    GFDF01005306    JAV08778.1    KQ460779    KPJ12242.1    JN033714    AEW46867.1    GFDF01005305    JAV08779.1    GFDF01005304    JAV08780.1    DS232013    EDS31873.1    KPJ12243.1    AXCN02000455    LN851681    CRL08768.1    APCN01002262    AAAB01008960    EAL40075.2    JXUM01031352    KQ560919    KXJ80348.1    KQ459598    KPI94627.1    NEVH01021237    PNF19653.1    CH477568    EAT38910.1    GAMC01007113    JAB99442.1    GAKP01018617    JAC40335.1    GAKP01018616    JAC40336.1    JXUM01031354    KXJ80350.1    AB264710    BAG30785.1    GBXI01000924    JAD13368.1    CH478582    EAT32750.1    KPI94624.1    GBXI01006185    JAD08107.1    JXUM01040976    KQ561266    KXJ79155.1    KXJ80349.1    KA646264    AFP60893.1    KPI94629.1    KXJ79154.1    GFDL01002519    JAV32526.1    GDHF01025685    JAI26629.1    EDS31871.1    EAU76599.1    GFDL01004884    JAV30161.1    UFQS01000574    UFQT01000574    SSX05045.1    SSX25407.1    EAT38908.1    AGBW02014221    OWR42063.1    BABH01005437    BABH01005438    KT992464    AOY34571.1    KK852732    KDR17465.1    GDHF01006374    JAI45940.1    GDHF01006779    JAI45535.1    AGBW02008847    OWR52398.1    CVRI01000047    CRK98477.1    OWR52397.1    GGFL01002037    MBW66215.1    CH963847    EDW73065.2    EAT32749.1    JX460804    AFS49707.1    AGBW02011758    OWR46180.1    JN033725    AEW46878.1    GGFL01006404    MBW70582.1    KJ576835    AIA09348.1    ODYU01001971    SOQ38904.1    GGFM01006254    MBW27005.1    NWSH01000819    PCG74065.1    JXUM01040978    KXJ79156.1    KXJ80351.1    GGFJ01004382    MBW53523.1    ADMH02000892    ETN64738.1    EAT38909.1    JXJN01024604    JXJN01024605    JXJN01024606    JN033728    AEW46881.1    KPJ12247.1    ATLV01010792    KE524614    KFB35691.1    KPI94628.1    AB073638    BAB91145.1    ETN64734.1    AGBW02009344    OWR51063.1    CP012523    ALC38766.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000218220    UP000007151    UP000002320    + More
UP000075880    UP000075886    UP000076408    UP000075840    UP000007062    UP000069940    UP000249989    UP000075903    UP000235965    UP000075902    UP000008820    UP000075920    UP000076407    UP000075882    UP000027135    UP000192223    UP000183832    UP000007798    UP000192221    UP000000673    UP000091820    UP000092460    UP000030765    UP000078200    UP000092553   

PRIDE

H9IZH5    H9JLY4    H9JLY5   

Pfam

PF00232   Glyco_hydro_1        + More
PF02953   zf-Tim10_DDP
PF00125   Histone

Interpro

IPR017853   Glycoside_hydrolase_SF        + More
IPR001360   Glyco_hydro_1       
IPR033132   Glyco_hydro_1_N_CS       
IPR018120   Glyco_hydro_1_AS       
IPR035427   Tim10-like_dom_sf       
IPR004217   Tim10-like       
IPR000164   Histone_H3/CENP-A       
IPR007125   Histone_H2A/H2B/H3       
IPR009072   Histone-fold       

SUPFAM

SSF51445   SSF51445        + More
SSF144122   SSF144122       
SSF47113   SSF47113       

Gene 3D

1.10.20.10    

ProteinModelPortal

H9IZH5   A0A194PVV9   A0A194R738   A0A2H1VWC6   A0A2A4JTU1   A0A212ERQ2   + More
A0A1W1EGM5   G9F9I1   A0A2A4JVJ5   A0A1L8DQN1   A0A194R3H3   G9F9G9   A0A1L8DQS5   A0A1L8DR18   B0WNN7   A0A182J2M6   A0A194R360   A0A182QI13   A0A182YP84   A0A0K2YR16   A0A1Y9GKT0   Q5TQY8   A0A182HAK7   A0A1Y9IRY8   A0A194PMT2   A0A2J7PTJ0   A0A182U0B4   Q16WF2   W8BL15   A0A034VEY7   A0A034VAL4   A0A182HAK9   B2DBM6   A0A0A1XS57   A0A1S4G3W5   Q16ET6   A0A194PPG4   A0A0A1XAG3   A0A182G2R0   A0A182HAK8   T1PC49   A0A194PPG9   A0A182G2Q9   A0A1Y9IRG1   A0A1Y9IW73   A0A1Q3FY94   A0A0K8UIW8   B0WNN5   A0A1Y9J0G9   A0A1Y9GKS9   A0NES8   A0A1Q3FR87   A0A336MAL5   Q16WF4   A0A212EKQ3   A0A182LL19   H9JLY4   H9JLY5   A0A219WGQ6   A0A1Y9IW90   A0A067R309   A0A0K8W4X1   A0A1W4XAC4   A0A0K8W3Q7   A0A212FF90   A0A1J1IDZ4   A0A212FF93   A0A2M4CLR8   A0A182LL23   B4MM56   A0A1S4G3C1   Q16ET7   A0A182QNT7   J9Z300   A0A1W4UV58   A0A212EXF5   G9F9I0   A0A2M4CZ21   A0A059WHP2   A0A2H1VF65   A0A2M3ZET6   A0A2A4JPS5   A0A182G2R1   A0A182JLR1   A0A182HAL0   A0A2M4BKN2   W5JN46   Q16WF3   A0A1A9W4X6   A0A1B0C2P0   G9F9I3   A0A194R3H6   A0A084VCJ7   A0A194PNR8   Q8T0W7   W5JPP3   A0A1Y9J100   A0A212FBG8   A0A1A9UP13   A0A0M4E0Q2  

PDB

3VII     E-value=6.53034e-146,     Score=1328

KEGG

101746960    no KO assigned | (RefSeq) myrosinase 1-like

GO

GO:0004553   GO:0005975   GO:0016021   GO:0008422   GO:0005739   GO:0005634   GO:0046872   GO:0003677   GO:0000786   GO:0015031   GO:0046982   GO:0102483   GO:0005215   GO:0022857   GO:0005515   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

PANTHER

PTHR10353  

Subcellular location

Chromosome  
Nucleus  

SignalP

Position:   1 - 15,         Likelihood:  0.995136

 

 

Length:

529

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.22024

Exp number, first 60 AAs:

0.0495

Total prob of N-in:

0.00295

outside

1  -  529

 

 

Pi

177.446925

Theta

167.742865

Tajima's D

0.092633

CLR

0.992575

CSRT

0.398230088495575

Interpretation

Uncertain