SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02613
Annotation
_odorant_receptor_15_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.749
 

Sequence

CDS
ATGATGACGCTCGTTTATCAAACAGACATTTTCAAACCAAATGTATTTTTCTGGAAAATGTTTGGGATATGGGCCGACAGGAAATCTTCGAAAACTTACAAATATTATTCGTTTGTTTTTTTATTTATAACTTTAATTATGTATAACTCGCTCCTTGCTATTAATCTGCTGTACACCCCTCTTAAAATTGAGTTATTAATCCGGGAAGTTATATTTTGTTTTACAGAAATAACAGTCACAACTAAAGTTTTAATGATTTTATTCAAGCGAAATAAAATTTTGGACGCCTTCGATTTGTTGAATAAAAACGAATTCCGAGGAAACAGCGAAGAAAGCTCTGCTATTATCCAAAAAAATAATTCCGCTTACAAAACATACTGGAAACTGTACGCCATATTATCTAATTTCGCTTATTCGTCCCAGGTTCTTGGACCTCTAATAGTGAAACTGATATGGAAAACAAAACTAGAACTACCAATATGTAACTATTATTTTTTGAACGAAGAGCTTCGTCACGATTTTTTTTCTGGCTGGTATATTTATCAATCTTTTGGTATGTACGGTCACATGATGTACAACGTCAACATTGATACTTTCATTTCGGGACTTCTTATGATGGCGGTGACGCAGCTAAAGATAATACAAACTAAGCTTTTAAGCCTGAAGCTAAATCCAAGGGAACGAAAAATGGACAGGGGTCTTATGAACATAACGGAAGTATTAAAATTAAACGAGATCTTAAAGCACTATGAGCTCGTATTGAAATATTGTTCAACGGTGCAAAGTATATTGGATGTTGCGATGTTTGTGCAGTTCGGGGTGGCTTCAGCGATTATATGCGTTGCTATGTGTGGTTTGATAATGGTGCGTTCTTCTACTGAAACCTTATTATTCATGGTAACTTACCTATTTGCCATGACCTTACAAATATTCGTACCGGCGTGGATGGGAACTCAATTACATTTCCAAAGTCAAGAACTAGTGTTTGCTGCTTACAATAGCGAATGGATACCACGGTGTCAGTCTTTTAAACGAAGCATCATTATTTTCGTGGAGCGTGCGAAAATTCCTATTACTATAACGGGATTGAAAATGTTTCCGCTTTCTTTAGCAACATTTACTTCGATAATGAAGACTGCGTATTCGTTCTTCACACTTATCCGGAATATGCAGACTCTCCAAGAAGAATAA
Protein
MMTLVYQTDIFKPNVFFWKMFGIWADRKSSKTYKYYSFVFLFITLIMYNSLLAINLLYTPLKIELLIREVIFCFTEITVTTKVLMILFKRNKILDAFDLLNKNEFRGNSEESSAIIQKNNSAYKTYWKLYAILSNFAYSSQVLGPLIVKLIWKTKLELPICNYYFLNEELRHDFFSGWYIYQSFGMYGHMMYNVNIDTFISGLLMMAVTQLKIIQTKLLSLKLNPRERKMDRGLMNITEVLKLNEILKHYELVLKYCSTVQSILDVAMFVQFGVASAIICVAMCGLIMVRSSTETLLFMVTYLFAMTLQIFVPAWMGTQLHFQSQELVFAAYNSEWIPRCQSFKRSIIIFVERAKIPITITGLKMFPLSLATFTSIMKTAYSFFTLIRNMQTLQEE

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
BK005924    DAA05974.1    AB234354    BAF31194.1    LN885116    CUQ99405.1    + More
GCVX01000173    JAI18057.1    KX655956    AOG12905.1    KM678299    AJE25872.1    KM892373    AJF23788.1    KM655536    AIT71986.1    KY283592    AST36252.1    KY225497    ARO70509.1    KM597200    AIT69877.1    ODYU01013062    SOQ59727.1    KR935712    ALM26204.1    JTDY01004631    KOB67926.1    KY707185    AVF19627.1    KT588130    AOE48040.1    AB186514    BAG12813.1    AB472138    BAH66355.1    BK005922    DAA05972.1    AB472094    BAH66311.1    KY283646    AST36305.1    KY399300    AQQ73531.1    GDKB01000042    JAP38454.1    KY283645    AST36304.1    KF487682    AII01080.1    MG816629    AXF48814.1    KY283722    AST36381.1    KZ149960    PZC76347.1    KX655955    AOG12904.1    LC002704    BAR43452.1    KX585346    ARO70239.1    GEDO01000047    JAP88579.1    KX084506    ARO76461.1    KX084461    ARO76416.1    GEDO01000027    JAP88599.1    KF768662    AIG51856.1    MG816584    AXF48769.1    KX084466    GEDO01000031    ARO76421.1    JAP88595.1    AB472095    BAH66312.1    KY707203    AVF19645.1    MH193996    AZB49442.1    KF717603    AHC55208.1    KY707232    AVF19674.1    AJ487483    CAD31949.1    KY399265    AQQ73496.1    KT588149    AOE48059.1    KR935753    ALM26245.1    KR935704    ALM26196.1    KY283593    AST36253.1    ODYU01001251    SOQ37202.1    GENK01000084    JAV45829.1    KY283647    AST36306.1    KT588113    AOE48023.1    GDKB01000043    JAP38453.1    MG546645    AYD42268.1    KJ188253    AIZ00995.1    SOQ59728.1    KY283723    AST36382.1    GENK01000058    JAV45855.1    KF768683    AIG51877.1    LC002744    BAR43492.1    KQ459589    KPI97528.1    KQ460870    KPJ11686.1    NWSH01005276    PCG64324.1    BK005923    DAA05973.1    SOQ59729.1    KQ971338    EFA02940.1    KP296756    AJO62220.1    MH723590    AYN64393.1    JX999587    AGG08877.1    KQ971321    EFA01335.1    KM892390    AJF23805.1    KM678316    AJE25889.1    KP296760    AJO62224.1    KQ435119    KZC14707.1    KP296757    AJO62221.1    KQ976595    KYM79613.1    KT381542    ALR72548.1    KK107128    QOIP01000006    EZA58248.1    RLU21942.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       
PDB
6C70     E-value=0.00218231,     Score=97

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
396
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
135.32672
Exp number, first 60 AAs:
22.45591
Total prob of N-in:
0.80650
POSSIBLE N-term signal
sequence
inside
1  -  37
TMhelix
38  -  60
outside
61  -  64
TMhelix
65  -  87
inside
88  -  191
TMhelix
192  -  214
outside
215  -  266
TMhelix
267  -  289
inside
290  -  295
TMhelix
296  -  318
outside
319  -  364
TMhelix
365  -  387
inside
388  -  396
 
 

Population Genetic Test Statistics

Pi
191.229233
Theta
126.964208
Tajima's D
1.145083
CLR
0.433436
CSRT
0.704364781760912
Interpretation
Uncertain
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