Gene

KWMTBOMO02605

Pre Gene Modal

BGIBMGA002631

Annotation

PREDICTED:_SLIT_and_NTRK-like_protein_4_[Bombyx_mori]

Location

Bomo_Chr5(+):6606728-6697139      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.977

CDS

ATGGTGCTGTTTGCATGGACATGGAGTGCTGCAGCAGCGAAAACGCTATGTCCGGTGCGGTGCATGTGCGACGACGCCTTAAGAGCCGCCTCCTGCGCCAACGCAAACCTAGAAATAGTTCCCATACAACTCAATCCAGAGGCAACTCTTATGAACCTTACGCACAATGCTATCGACAATCTACTCTACGCATTCAACCTCTATACCCAGCTCACTGTTCTAGATATTTCTTACAACAAGATATTAGATTTAGGTAGTGAAAACTTCGAAAGCAACAGTGAAATGAGACATTTGAATTTAAGTAATAATTTCTTAAAGCGTCTTGATAAAGACGCCTTCGTCGGATTGAATAGTTTGGTTGATTTGAATCTATCAAACAATGAAATATCGAACATACACGTGCAGACATTTAGAGATTTATCTGCTTTAGAAAGACTTGACTTCTCAAACAATAGACTGGTTACTTTCGAACCGGAAACATTTGAGCCCTTGTCGTCATTGAAGATTTTATCACTCAGAAACAATTCCATATTAGATATACCATCTGCCAATCTTGGATTCGTCATTCACCTTGAATATTTAGATCTGTCAGAGAATTTGATACAGCAAGTCTCCAGACACGGCTTACCGTTCTTAAAAGAATTGAAACATTTGGACTTGAATAATAATATAATTGAAAGCGTAGATCAATTAGGTTTTCATAGTTTGCCTTCATTACGTCATTTGGACCTCAGTGATAATAATATGACTTTAATTCCAACGTCCGCTCTTTCAAAACTATCTAACTTGTCCCATTTGTACTTAAGTGGAAACTTTTTTCAAAACGTTTCATCGCTTTCTTTCCAAAGTCTTTTCCTCCTGAAACACTTACACTTGAGCAGACTTTACGTACTCGAAAGAATCGATTCGAGAGCTTTCGTTGATAATATAAATCTGCAAAAAATATGGATGAATGATAATGTCAAAGTGAGGGAAGTTCCGCCGAGATTGTTTCACGGAAATCCGAAATTGACAAATATTTATATGAAAAACAATGCCTTAGAGACACTGGAAGCATCTCATTTTCCGATAGACAGATTACAAGAGCTAGAGATTTCTGGAAATCCATTCGCGTGTAATTGTTCCCTGCTGTGGCTGTGGAAGCTGGGTAAAGATAGTGAGACCACTACTAAGAAATCAGGGAACTCTAGTGAGTTTCTCAAAATAGACTACGAAGACGTAAAGTGTTCAGGTCCGTTGCAATTAAAAGGCATGTTGTTCGTTCAGATTCCTGAATCTGAATTTGGGTGCTCAAGCGGATAA

Protein

MVLFAWTWSAAAAKTLCPVRCMCDDALRAASCANANLEIVPIQLNPEATLMNLTHNAIDNLLYAFNLYTQLTVLDISYNKILDLGSENFESNSEMRHLNLSNNFLKRLDKDAFVGLNSLVDLNLSNNEISNIHVQTFRDLSALERLDFSNNRLVTFEPETFEPLSSLKILSLRNNSILDIPSANLGFVIHLEYLDLSENLIQQVSRHGLPFLKELKHLDLNNNIIESVDQLGFHSLPSLRHLDLSDNNMTLIPTSALSKLSNLSHLYLSGNFFQNVSSLSFQSLFLLKHLHLSRLYVLERIDSRAFVDNINLQKIWMNDNVKVREVPPRLFHGNPKLTNIYMKNNALETLEASHFPIDRLQELEISGNPFACNCSLLWLWKLGKDSETTTKKSGNSSEFLKIDYEDVKCSGPLQLKGMLFVQIPESEFGCSSG

Uniprot

H9IZE6   A0A2H1VCC7   A0A2A4JAA2   A0A194Q298   A0A194R1L4   A0A0L7LPC7   + More
D7EK55   A0A0A9YHB4   A0A0T6B514   A0A1W4WYI4   A0A1Y1MRC6   N6TL10   A0A182HET1   A0A0P8YC95   E3CTU6   E4NKH9   B4KNQ6   A0A1B6FHU7   A0A0L0CPQ8   B4LM54   A0A1W4UZB1   B4J6B5   A0A336MVZ7   A0A1B6J0I9   A0A3B0JRU5   A0A1A9X3E7   A0A1S4F3Q2   A0A1B0C555   A0A1A9ZRH9   A0A1A9YQV1   T1I5J4   B5E0M6   A0A1I8PTU4   Q17GD4   A0A1I8PTW2   B3NNA1   Q5U1A7   A0A0R1DWT1   B4MS32   A0A182YEA0   A0A0J9RIL4   A0A1I8PTR5   A0A182FVK3   Q7PSP4   A0A182QKQ2   A0A034VZE0   A0A2R7VX64   A0A0K8UH47   A0A182FVK4   W8ADK8   W5JNS2   W8AK15   W8ANU6   A0A1S4F3Q7   A0A182GSZ5   W8B8P8   B0WD59   Q17GD6   A0A182WDC6   A0A1I8N869   A0A0A1WMR2   Q7QHK8   A0A182WDC4   A0A084W3N2   A0A182RXL9   A0A2P8YRP4   A0A1B6KXJ9   A0A182PVU8   A0A182JWK7   A0A1I8JT61   A0A182V414   A0A182X8F7   A0A182JK21   A0A182QFJ8   A0A182LHL0   A0A182MRL9   A0A182YE98   A0A1S3DKZ2   A0A182PK83   A0A067RCU2   A0A182MXG7   A0A084W3P2   A0A182HG05   A0A182X8F6   A0A2M4CMH2   W5JI73   A0A1J1HM97   A0A1B6DPN9   A0A195C3I8   A0A154PKX2   A0A151JML4   A0A158P3Z6   A0A151JZA2   E2C621   F4WKS0   E9J8X6   A0A0L7QZ04   A0A0J7L624  

Pubmed

19121390    26354079    26227816    18362917    19820115    25401762    + More
26823975    28004739    23537049    26483478    17994087    26108605    18057021    15632085    23185243    17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25244985    22936249    12364791    25348373    24495485    20920257    23761445    25315136    25830018    24438588    29403074    20966253    24845553    21347285    20798317    21719571    21282665   

EMBL

BABH01014220    ODYU01001801    SOQ38500.1    NWSH01002409    PCG68352.1    KQ459589    + More
KPI97530.1    KQ460870    KPJ11688.1    JTDY01000459    KOB77071.1    DS497731    EFA13010.1    GBHO01011142    GDHC01002256    JAG32462.1    JAQ16373.1    LJIG01009784    KRT82388.1    GEZM01023671    JAV88234.1    APGK01020354    KB740193    KB631669    ENN81114.1    ERL85228.1    JXUM01132563    KQ567861    KXJ69248.1    CH902619    KPU76595.1    BT125762    BT125775    ADP89559.1    ADQ28998.1    BT125776    ADQ28999.1    CH933808    EDW10041.2    GECZ01019990    JAS49779.1    JRES01000195    KNC33394.1    CH940648    EDW60932.1    KRF79675.1    CH916367    EDW00888.1    UFQT01002016    SSX32417.1    GECU01015017    JAS92689.1    OUUW01000001    SPP75401.1    JXJN01025843    JXJN01025844    ACPB03005255    CM000071    EDY69371.2    KRT02948.1    CH477263    EAT45616.1    CH954179    EDV55525.2    KQS62312.1    AE013599    BT015985    AAF46774.2    AAV36870.1    ABV53873.1    CM000158    KRJ99688.1    KRJ99689.1    CH963850    EDW74921.2    CM002911    KMY95672.1    KMY95673.1    AAAB01008816    EAA05243.5    AXCN02001706    GAKP01011173    JAC47779.1    KK854061    PTY10505.1    GDHF01033894    GDHF01026426    GDHF01025981    GDHF01010339    JAI18420.1    JAI25888.1    JAI26333.1    JAI41975.1    GAMC01020395    JAB86160.1    ADMH02000825    ETN64953.1    GAMC01020398    JAB86157.1    GAMC01020397    JAB86158.1    JXUM01086055    JXUM01086056    KQ563541    KXJ73689.1    GAMC01020396    JAB86159.1    DS231894    EDS44237.1    EAT45614.1    GBXI01014326    GBXI01013444    JAC99965.1    JAD00848.1    EAA05167.4    ATLV01020065    KE525293    KFB44826.1    PYGN01000405    PSN46922.1    GEBQ01023794    JAT16183.1    APCN01005446    APCN01005447    AXCN02001704    AXCM01005339    KK852549    KDR21567.1    ATLV01020067    KFB44836.1    APCN01005448    APCN01005449    APCN01005450    APCN01005451    APCN01005452    GGFL01002301    MBW66479.1    ADMH02001106    ETN64092.1    CVRI01000011    CRK89165.1    GEDC01009671    GEDC01001772    JAS27627.1    JAS35526.1    KQ978317    KYM95165.1    KQ434936    KZC11938.1    KQ978949    KYN27377.1    ADTU01008649    KQ981427    KYN41760.1    GL452895    EFN76626.1    GL888206    EGI65162.1    GL769162    EFZ10717.1    KQ414685    KOC63828.1    LBMM01000409    KMQ98427.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000037510    UP000007266    + More
UP000192223    UP000019118    UP000030742    UP000069940    UP000249989    UP000007801    UP000009192    UP000037069    UP000008792    UP000192221    UP000001070    UP000268350    UP000091820    UP000092460    UP000092445    UP000092443    UP000015103    UP000001819    UP000095300    UP000008820    UP000008711    UP000000803    UP000002282    UP000007798    UP000076408    UP000069272    UP000007062    UP000075886    UP000000673    UP000002320    UP000075920    UP000095301    UP000030765    UP000075900    UP000245037    UP000075885    UP000075881    UP000075840    UP000075903    UP000076407    UP000075880    UP000075882    UP000075883    UP000079169    UP000027135    UP000075884    UP000183832    UP000078542    UP000076502    UP000078492    UP000005205    UP000078541    UP000008237    UP000007755    UP000053825    UP000036403   

PRIDE

H9IZE6    E3CTU6    Q5U1A7   

Pfam

PF13855   LRR_8        + More
PF13306   LRR_5
PF00560   LRR_1
PF13516   LRR_6

Interpro

IPR000483   Cys-rich_flank_reg_C        + More
IPR032675   LRR_dom_sf       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR026906   LRR_5       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9IZE6   A0A2H1VCC7   A0A2A4JAA2   A0A194Q298   A0A194R1L4   A0A0L7LPC7   + More
D7EK55   A0A0A9YHB4   A0A0T6B514   A0A1W4WYI4   A0A1Y1MRC6   N6TL10   A0A182HET1   A0A0P8YC95   E3CTU6   E4NKH9   B4KNQ6   A0A1B6FHU7   A0A0L0CPQ8   B4LM54   A0A1W4UZB1   B4J6B5   A0A336MVZ7   A0A1B6J0I9   A0A3B0JRU5   A0A1A9X3E7   A0A1S4F3Q2   A0A1B0C555   A0A1A9ZRH9   A0A1A9YQV1   T1I5J4   B5E0M6   A0A1I8PTU4   Q17GD4   A0A1I8PTW2   B3NNA1   Q5U1A7   A0A0R1DWT1   B4MS32   A0A182YEA0   A0A0J9RIL4   A0A1I8PTR5   A0A182FVK3   Q7PSP4   A0A182QKQ2   A0A034VZE0   A0A2R7VX64   A0A0K8UH47   A0A182FVK4   W8ADK8   W5JNS2   W8AK15   W8ANU6   A0A1S4F3Q7   A0A182GSZ5   W8B8P8   B0WD59   Q17GD6   A0A182WDC6   A0A1I8N869   A0A0A1WMR2   Q7QHK8   A0A182WDC4   A0A084W3N2   A0A182RXL9   A0A2P8YRP4   A0A1B6KXJ9   A0A182PVU8   A0A182JWK7   A0A1I8JT61   A0A182V414   A0A182X8F7   A0A182JK21   A0A182QFJ8   A0A182LHL0   A0A182MRL9   A0A182YE98   A0A1S3DKZ2   A0A182PK83   A0A067RCU2   A0A182MXG7   A0A084W3P2   A0A182HG05   A0A182X8F6   A0A2M4CMH2   W5JI73   A0A1J1HM97   A0A1B6DPN9   A0A195C3I8   A0A154PKX2   A0A151JML4   A0A158P3Z6   A0A151JZA2   E2C621   F4WKS0   E9J8X6   A0A0L7QZ04   A0A0J7L624  

PDB

4U7L     E-value=3.90708e-19,     Score=233

KEGG

101735623    no KO assigned | (RefSeq) SLIT and NTRK-like protein 4

GO

GO:0016021   GO:0042981   GO:0005615   GO:0031012   GO:0005515   GO:0016849   GO:0016020   GO:0008270   GO:0043565   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

433

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03444

Exp number, first 60 AAs:

0.00484

Total prob of N-in:

0.00355

outside

1  -  433

 

 

Pi

279.263367

Theta

195.203152

Tajima's D

1.451763

CLR

0.378171

CSRT

0.772761361931903

Interpretation

Uncertain