SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02601  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002627
Annotation
PREDICTED:_uncharacterized_protein_LOC101735895_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.404
 

Sequence

CDS
ATGAAGTCAGTTGTCCTGATATGTCTGGCGTTCGCCGTCTTCAACTGCGGAGCCGATAACGTCCACCTTAATGAAGATGAAAGAGAAAAAGCTAACTGGTACACTGCAGAATGTGGTGTAGAAACTGGCGTGAGCACCGAAGTGATAAATGCAGCGAAGATTGGAAAGTACTCCAAAGATAAAGCTTTTAAGAAATTCGTGCTTTGCTTTTTCAAGAAATCCGCAATCTTGAACTCAGATGGTACATTGAACATGGTTGTTGCGCTAGCAAAACTTCCTTCTGGTGTTAATAAATCTGAAGCCCAAAGCGTACTAGAACAGTGCAAGAATAAGACCGGCCAAGACGCAGCCGATAAAGCCTTTGCGATCTTACAATGCTTTCACAAAGGGACCAAGACACATATTTTATTTTAA
Protein
MKSVVLICLAFAVFNCGADNVHLNEDEREKANWYTAECGVETGVSTEVINAAKIGKYSKDKAFKKFVLCFFKKSAILNSDGTLNMVVALAKLPSGVNKSEAQSVLEQCKNKTGQDAADKAFAILQCFHKGTKTHILF

Summary

EMBL
BABH01014233    BABH01014234    BABH01014235    DQ311409    ABD36353.1    AB518886    + More
BAI22690.1    AF393500    AAL60425.1    KP975129    ALT31648.1    KF487581    AII00979.1    KQ460870    KPJ11699.1    LC027690    BAV56793.1    KX655930    AOG12879.1    KY130464    APG32532.1    KX585283    ARO70176.1    AK401337    BAM17959.1    HM536616    ADO95155.1    KF487609    AII01007.1    AGBW02014105    OWR42255.1    MG788223    AXF48741.1    ODYU01000620    SOQ35719.1    ODYU01002843    SOQ40827.1    KT327213    ALS03856.1    HQ234489    ADY17884.1    MG546557    AYD42180.1    JX863693    AGR39568.1    GCVX01000159    JAI18071.1    KT192032    KT261659    ALD65885.1    ALJ30200.1    GCVX01000160    JAI18070.1    GENK01000001    JAV45912.1    JQ753076    KZ150094    AFI57167.1    PZC73630.1    JN571545    AEX07280.1    JTDY01002515    KOB71254.1    EZ407238    ACX53795.1    NWSH01008731    PCG62433.1    KC111819    AGC92794.1    KJ186818    AIX97130.1    KP963691    ALG36139.1    KT192033    KT261668    ALD65886.1    ALJ30209.1    KX660672    ARU83754.1    KB466357    RLZ02248.1    KM258401    KM251650    AIZ03625.1    AKC58531.1    KT268307    ANQ46501.1    GCVX01000158    JAI18072.1    NNAY01000282    OXU29502.1    HE578203    CCD17787.1    KT327221    ALS03864.1    KT861417    AMR98353.1    KC464551    AGI05202.1    JQ753075    AFI57166.1    APCN01003296    AJ697721    AAAB01008986    CAG26914.1    EAL38696.2    L41640    AAA85090.1    KX609458    ARN17865.1    KC111817    AGC92792.1    KR733558    AKI84370.1    KC492499    AGK24578.1    ADMH02001024    ETN64378.1    KF977567    AIX97029.1    NWSH01000549    PCG75714.1    GENK01000029    JAV45884.1    KR780577    ANE37551.1    CH477246    EAT46207.1    KF383275    AHE13793.1    KT983813    AMY16434.1    MF975378    AUF72954.1    JX962792    AGH70105.1    KX655915    AOG12864.1    KX655922    AOG12871.1    CH901021    EAT32319.1    EAT46208.1    DS232236    EDS38121.1    AXCM01003345    GL767709    EFZ13147.1    AF393501    AAL60426.1    JF937664    AEP27187.1    APGK01035161    BT127263    KP736119    KB740923    KB632326    AEE62225.1    AKK25138.1    ENN78201.1    ERL92485.1    KX078771    AQM49875.1    KP975131    ALT31650.1    KY826458    AVI04886.1    HQ853355    ADX94403.1    KR733564    AKI84376.1    AXCN02001040    GACR01000063    JAA74398.1    BABH01024823    DQ311309    ABD36253.1    KR733568    AKI84380.1    KR733556    AKI84368.1    AB180437    AB189031    BAD26681.1    BAD52263.1    KT156682    ANG08535.1    KP403738    AKM52557.1    KP082902    AKW47194.1   
Pfam
PF01395   PBP_GOBP
Interpro
IPR036728   PBP_GOBP_sf        + More
IPR006170   PBP/GOBP       
SUPFAM
SSF47565   SSF47565       
Gene 3D
PDB
5DIC     E-value=2.57127e-07,     Score=124

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.998742
 
 
Length:
137
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.3634
Exp number, first 60 AAs:
0.29508
Total prob of N-in:
0.11486
outside
1  -  137
 
 

Population Genetic Test Statistics

Pi
200.281365
Theta
155.729857
Tajima's D
1.393789
CLR
0.31977
CSRT
0.757262136893155
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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