Gene

KWMTBOMO02600

Pre Gene Modal

BGIBMGA002666

Annotation

PREDICTED:_general_odorant-binding_protein_56d-like_[Bombyx_mori]

Location

Bomo_Chr5(-):6502276-6502747      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.084 Extracellular   Reliability : 1.517 Nuclear   Reliability : 1.42

CDS

ATGATAATTATTTTATCATATTCACAGAACGTCCACCTTGCTGAAACTCAAAAAGAAAAAGCTAAGCAGTACACCTCAGAATGTGTTAGAGAATCTGGCGTGAGCACCGAAGCGATAAATGCAGCGAAGATTGGAAAGTACTCCAAAGATAAAGCTTTTAAGAACTTCGTGCTTTGCTTTTTCAAAAAATCCGCAATCTTCAACTCAGATGGTACATTGAACATGGATGTTGCGCTAGCAAAACTTCCTCCTGGTGTTAATAAATCTGAAGCCCAAAGCGTATTAAAACAGTGCAAGAATAAGACCGGCCAAGGCGCAGCCGATAAAGCCTTCGAGATCTTCCGATGTTACTACAAAGGGACCAAGACACATATTTTATTTTAA

Protein

MIIILSYSQNVHLAETQKEKAKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLCFFKKSAIFNSDGTLNMDVALAKLPPGVNKSEAQSVLKQCKNKTGQGAADKAFEIFRCYYKGTKTHILF

Uniprot

H9IZI1   C7G4W1   H9IZE1   Q2F5L4   H9IZE2   A0A076E927   + More
A0A2H4FXY6   Q8WRV9   A0A1B3P5L8   A0A1B4ZBI7   A0A0U3AN25   A0A2K8GKL6   A0A076E7E2   A0A212EL95   A0A194R2F3   A0A2H1V4I0   A0A2H1VJ21   A0A0K8TVG9   A0A0K8TUX5   A0A345BER7   A0A1L2BL94   I4DJ69   E3UPD2   A0A386H995   U5KCW9   F1CEY0   A0A1V1WC13   A0A0M4JRC2   D2SNV4   A0A2A4ITG4   G9I574   I1VZV9   A0A0L7L7D4   L7X1X8   A0A0X8U7T9   F1DI86   E9J206   A0A1C8JZL4   A0A0A7HIY9   A0A142K318   A0A0B4KZC6   A0A3L9LY87   A0A0M4JIP8   M4VTK9   A0A0G2YGV6   A0A1Y0KDK0   A0A0K8TUB3   A0A0X8VWL7   A0A0G2YDB7   A0A0G2YKK7   I1VZV8   A0A0G2YDA5   A0A2P9JZE5   L7X1P8   M3TYZ1   G4Y3X2   A0A1J0KKD4   Q25000   A0A1S5VFG9   M9YW76   A0A1Q1N694   J3JVJ5   A0A232FFM5   A0A0H3W5L4   A0A2A4JVQ6   R9PSN6   G8B1M3   W5JM47   A0A1L2BL98   A0A1V1WC16   A0A1D6WII5   A0A0X9EZ19   A0A0H3W574   A0A182FVB3   A0A1W6L179   I1VJ75   A0A165EY30   A0A1S5VFH1   A0A2P9JZF4   M4T8H7   Q8WRV8   A0A1B1FKI3   A0A1B3P5J0   A0A1C8K2S9   Q7Z1W8   A0A1L8EDQ8   A0A1L8EDJ0   A0A0N9K2E9   A0A1L8EFE6   A0A1L8EFS8   A0A1B0D4J6   U4UHI4   A0A1L8EFR8   A0A194RJX2   I4DJV7   A0A0B4KZD0   Q6F453   B4KRK9   A0A173ACY0  

Pubmed

19121390    24998398    27538507    26657286    28736530    22118469    + More
26354079    26017144    29727827    22651552    24053512    26445454    26346731    20074338    28756777    26227816    21305009    21282665    27652115    25461610    25856077    27012867    23512006    25099623    23517120    27836740    28187311    27545810    22516182    23537049    25938508    28648823    20075255    20920257    23761445    23499610    15303324    26164593    17994087   

EMBL

BABH01014234    AB518886    BAI22690.1    BABH01014235    DQ311409    ABD36353.1    + More
BABH01014233    KF487581    AII00979.1    KY130464    APG32532.1    AF393500    AAL60425.1    KX655930    AOG12879.1    LC027690    BAV56793.1    KP975129    ALT31648.1    KX585283    ARO70176.1    KF487609    AII01007.1    AGBW02014105    OWR42255.1    KQ460870    KPJ11699.1    ODYU01000620    SOQ35719.1    ODYU01002843    SOQ40827.1    GCVX01000160    JAI18070.1    GCVX01000159    JAI18071.1    MG788223    AXF48741.1    KT327213    ALS03856.1    AK401337    BAM17959.1    HM536616    ADO95155.1    MG546557    AYD42180.1    JX863693    AGR39568.1    HQ234489    ADY17884.1    GENK01000001    JAV45912.1    KT192032    KT261659    ALD65885.1    ALJ30200.1    EZ407238    ACX53795.1    NWSH01008731    PCG62433.1    JN571545    AEX07280.1    JQ753076    KZ150094    AFI57167.1    PZC73630.1    JTDY01002515    KOB71254.1    KC111819    AGC92794.1    KJ186818    AIX97130.1    HQ853355    ADX94403.1    GL767709    EFZ13147.1    KR780577    ANE37551.1    KM258401    KM251650    AIZ03625.1    AKC58531.1    KT861417    AMR98353.1    KF383275    AHE13793.1    KB466357    RLZ02248.1    KT192033    KT261668    ALD65886.1    ALJ30209.1    KC464551    AGI05202.1    KR733564    AKI84376.1    KX660672    ARU83754.1    GCVX01000158    JAI18072.1    KJ186822    AIX97134.1    KR733568    AKI84380.1    KR733556    AKI84368.1    JQ753075    AFI57166.1    KR733558    AKI84370.1    KY826458    AVI04886.1    KC111817    AGC92792.1    GACR01000063    JAA74398.1    JF937664    AEP27187.1    KX290616    APC94187.1    L41640    AAA85090.1    KY445447    AQN78382.1    KC492499    AGK24578.1    KX078771    AQM49875.1    APGK01035161    BT127263    KP736119    KB740923    KB632326    AEE62225.1    AKK25138.1    ENN78201.1    ERL92485.1    NNAY01000282    OXU29502.1    KP736125    AKK25143.1    NWSH01000549    PCG75714.1    GABX01000023    JAA74496.1    HE578203    CCD17787.1    ADMH02001024    ETN64378.1    KT327221    ALS03864.1    GENK01000029    JAV45884.1    KJ082104    AIY61044.1    KP453838    ALM64969.1    KP736110    AKK25132.1    KX609458    ARN17865.1    BT127821    JQ855696    AEE62783.1    AFI45059.1    KT983813    AMY16434.1    KY445446    AQN78381.1    KY826468    AVI04896.1    JX962792    AGH70105.1    AF393501    AAL60426.1    KT268307    ANQ46501.1    KX655915    AOG12864.1    KR780581    ANE37555.1    AY182011    AAO64978.1    GFDG01001987    JAV16812.1    GFDG01002018    JAV16781.1    KP963691    ALG36139.1    GFDG01001388    JAV17411.1    GFDG01001376    JAV17423.1    AJVK01003282    ERL92487.1    GFDG01001360    JAV17439.1    KQ460118    KPJ17734.1    AK401575    BAM18197.1    KF383278    AHE13796.1    AB180437    AB189031    BAD26681.1    BAD52263.1    CH933808    EDW10435.1    KT156682    ANG08535.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000218220    UP000037510    UP000019118    + More
UP000030742    UP000215335    UP000002358    UP000000673    UP000069272    UP000092462    UP000009192   

PRIDE

H9IZI1    C7G4W1    H9IZE1    Q2F5L4    H9IZE2   

Pfam

PF01395   PBP_GOBP

Interpro

IPR036728   PBP_GOBP_sf        + More
IPR006170   PBP/GOBP       

SUPFAM

SSF47565   SSF47565       

Gene 3D

1.10.238.20    

ProteinModelPortal

H9IZI1   C7G4W1   H9IZE1   Q2F5L4   H9IZE2   A0A076E927   + More
A0A2H4FXY6   Q8WRV9   A0A1B3P5L8   A0A1B4ZBI7   A0A0U3AN25   A0A2K8GKL6   A0A076E7E2   A0A212EL95   A0A194R2F3   A0A2H1V4I0   A0A2H1VJ21   A0A0K8TVG9   A0A0K8TUX5   A0A345BER7   A0A1L2BL94   I4DJ69   E3UPD2   A0A386H995   U5KCW9   F1CEY0   A0A1V1WC13   A0A0M4JRC2   D2SNV4   A0A2A4ITG4   G9I574   I1VZV9   A0A0L7L7D4   L7X1X8   A0A0X8U7T9   F1DI86   E9J206   A0A1C8JZL4   A0A0A7HIY9   A0A142K318   A0A0B4KZC6   A0A3L9LY87   A0A0M4JIP8   M4VTK9   A0A0G2YGV6   A0A1Y0KDK0   A0A0K8TUB3   A0A0X8VWL7   A0A0G2YDB7   A0A0G2YKK7   I1VZV8   A0A0G2YDA5   A0A2P9JZE5   L7X1P8   M3TYZ1   G4Y3X2   A0A1J0KKD4   Q25000   A0A1S5VFG9   M9YW76   A0A1Q1N694   J3JVJ5   A0A232FFM5   A0A0H3W5L4   A0A2A4JVQ6   R9PSN6   G8B1M3   W5JM47   A0A1L2BL98   A0A1V1WC16   A0A1D6WII5   A0A0X9EZ19   A0A0H3W574   A0A182FVB3   A0A1W6L179   I1VJ75   A0A165EY30   A0A1S5VFH1   A0A2P9JZF4   M4T8H7   Q8WRV8   A0A1B1FKI3   A0A1B3P5J0   A0A1C8K2S9   Q7Z1W8   A0A1L8EDQ8   A0A1L8EDJ0   A0A0N9K2E9   A0A1L8EFE6   A0A1L8EFS8   A0A1B0D4J6   U4UHI4   A0A1L8EFR8   A0A194RJX2   I4DJV7   A0A0B4KZD0   Q6F453   B4KRK9   A0A173ACY0  

PDB

5DIC     E-value=2.81479e-09,     Score=141

KEGG

101737701    no KO assigned | (RefSeq) general odorant-binding protein 56d-like

GO

GO:0005549   GO:0016021   GO:0006810   GO:0016020   GO:0008270   GO:0043565   GO:0005515   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

Length:

127

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01077

Exp number, first 60 AAs:

0.00351

Total prob of N-in:

0.16903

outside

1  -  127

 

 

Pi

310.39426

Theta

179.071315

Tajima's D

2.279999

CLR

0

CSRT

0.92190390480476

Interpretation

Uncertain