Silkworm Genome Informatics Database

Gene

KWMTBOMO02593 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002624

Annotation

PREDICTED:_eisosome_protein_SEG2_[Bombyx_mori]

Location

Bomo_Chr5(+):6430189-6434743 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.466

CDS

ATGCAGCCAAGCCTCAGGGAGCCAAGCTTCACGATGAGGCTCTCCCTGGTTTTTGAATTACTTTTGATATTCGTGCTGCTAGCATTCGCAGCTTCGAAAAGTGTCAAAAAACAAAACCAAAGGAAAAGCATTCAGAACAGAAACGACGAGGACAAACCCGATGATGATGGCATTAACAAGTATTGCAAGTGTTCCGAGGCGTTTTGCAACTGTTGCCGGGATTTTTCCGTTCCGGTTATAAATTTAAATGGCCCAGGATGTGCGACTTTAATGTATCTGAATGGCGATAAAATGTCGGTATCTCTGAGCTTCGGTAAAAAGGTGATCACGAACAGAACTCTATCAAGTCGCAAGCCGAGTCCTGTTTGCATGCCTTTACCTGGAGGCATATCAAAGTTCTGTGGACGAGTATATAATATTGCACGAGCTGGAGAAGAGTTTCGAGCGTGTTTAGGTCTAGAGCTGCAGGCAAAGAGTACTGTGGAGGCAGCAGTTAGAGTGTCATGCTTCAAGTTTGGGCCCCGTGGAGTGACGTCGGAGCCGGCAGATCCTCTTCCGCTTGTTCCTCAGGATGAAAAGGAGGATGATGATGACGATGATGATGACGACGACGACTTTGGTCTCGGTGCTGATGACGATGATGAAGAAGAAGACGATGATGATGATGATGATGAAGGCGAACTAGATGCCGTTAACGATGTAGAAAGTGCAGATTATACAGGGTTTAGTCTTTTGGGCGAAGACATTTTAGGTGATCTGTTTGGTTCCTCCGGTGGTAAAAAACCCAATAAAATTAAAAAGAAGCAAGCTCCTGCGGTTACTTCTACGACTTCGACAACTACGAGACGCCCTCGACCCTCTCGCCGCCCATCAAGAAGACCAACACGAACAACAACTCCTTTACCAATCAGATCCACTACTGTAAGAGTTCGCCCAGTCAACGGTAATCGCCGAACTACTCGCCGGCCCACTAGACGTCCAGGCAATGGAGGGCGTCCGCAAAGGCGGACAACCACTGAATCTACATCTACCTCAATCTCCACAACTACAACATCAGCTCCAATAGCCATTGCATCCGATATACCTGTGGTTCAAACAACAGAGAACATAGCTATTATTAGCAGTATAAATACCGAAAAATATGAGCCTGTAGCTATCATAGATCAGAAAGCTGAGCCAACGATGAAAATAACTACCCCAAATAGTGTAACTGAGTTTATTCAAGATCCCAGTTTGGAGATGTCTTTAGCGCATATAACCGGTCAATTATCATCTATGCAAGTCACACCATTACAACCAAATAATGAAAAGGAGTCTAACATACCGAAAATAGAGTCTGATATGAAATACGAAAAGGTAGAAACGCTCACTCCCAAAACTCCATCAAGTGTTGCTTTTGATGTTACATCAGGAGAAGCTGTAAGCGATGATATGATACAGATAGTCCAAAGTCTCGATTCAAGTTCAGAAGAAATTTCACCCACAAAAGAATCAATAACTGCAGACGAAAGTCGAGGACACTTTTATAATTTTGGTTCTCATTATGAAGGCCTTACCTTACCCAAAAAGAAAAACAGAAATCCACAGTTTGCACTAGAGGATTTGGATGTTTTAGATTTAACTGAAATCGGTGAAAATATCGGTGATCAATTTGGTATATTTGGTGGCAGAAAGAGGCAGAATAAACTTAAGCCAAACAAACATCGTGACGGTAGAGACGGCGATGAGTATGATGAAATGTTTGATGTCATTTCGCTTGATGCTTTAACGCGAAAATCTGATACAGGTAACAAAAATATTAAAAAAGATCGAAGAAGACAAAACAAAATGATGAGAGACTTATGGCCGGAGGCATGA

Protein

MQPSLREPSFTMRLSLVFELLLIFVLLAFAASKSVKKQNQRKSIQNRNDEDKPDDDGINKYCKCSEAFCNCCRDFSVPVINLNGPGCATLMYLNGDKMSVSLSFGKKVITNRTLSSRKPSPVCMPLPGGISKFCGRVYNIARAGEEFRACLGLELQAKSTVEAAVRVSCFKFGPRGVTSEPADPLPLVPQDEKEDDDDDDDDDDDFGLGADDDDEEEDDDDDDDEGELDAVNDVESADYTGFSLLGEDILGDLFGSSGGKKPNKIKKKQAPAVTSTTSTTTRRPRPSRRPSRRPTRTTTPLPIRSTTVRVRPVNGNRRTTRRPTRRPGNGGRPQRRTTTESTSTSISTTTTSAPIAIASDIPVVQTTENIAIISSINTEKYEPVAIIDQKAEPTMKITTPNSVTEFIQDPSLEMSLAHITGQLSSMQVTPLQPNNEKESNIPKIESDMKYEKVETLTPKTPSSVAFDVTSGEAVSDDMIQIVQSLDSSSEEISPTKESITADESRGHFYNFGSHYEGLTLPKKKNRNPQFALEDLDVLDLTEIGENIGDQFGIFGGRKRQNKLKPNKHRDGRDGDEYDEMFDVISLDALTRKSDTGNKNIKKDRRRQNKMMRDLWPEA

Uniprot

NA

ProteinModelPortal

NA

KEGG

101736159 no KO assigned | (RefSeq) eisosome protein SEG2

GO

GO:0005488 GO:0006810 GO:0016020 GO:0008270 GO:0043565 GO:0005515 GO:0006631 GO:0006635 GO:0006281 GO:0048384

SignalP

Position: 1 - 32, Likelihood: 0.742194

Length:

618

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

26.21176

Exp number, first 60 AAs:

20.86016

Total prob of N-in:

0.57947

POSSIBLE N-term signal

sequence

inside

1 - 12

TMhelix

13 - 32

outside

33 - 618

Pi

284.439252

Theta

202.825558

Tajima's D

1.195393

CLR

0.072826

CSRT

0.711514424278786

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
29197581	CSEAFCNCCR	100.00	1e-04
29197581	VCAEISNIR	100.00	0.010

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics