SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02587  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002670
Annotation
PREDICTED:_lipase-1_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.828
 

Sequence

CDS
ATGATCCCTGGAGACAACAGTCACTATGTGGAAGGTGTAAGCCGATACGTTTGGATGCCTGATGGCGAGGGTGTTCCTCACCTCGTTGACCTGGAAGAACCGGCCGAGGAAGACATCCTTATGTCAAGGAACGGTGCAAACAACCAATACTGGCTTTTCACCAGACGTAACCAAAACAACCATCAAGTTATTACAAATGGCAATGTCAACTCTATCCGGAACTCGAACTACAATGGAAACCTGCCTCTCTTTGTTATTGTCCACGGCTGGAACAGCAACGGAAACTCCGCTGTGAACACCATGATCCGCCCCGCCTTGCTGGCCGTCTCCGACTGCAACGTTATTGTTGTGGACTGGCGTGGTCTTGCCAACGGTCTATACAACACTGCCGTCAATGGAGTTCCCAGTGTCGGACAGTTCCTTGGCAACTTTTTGGTCTGGCTCATCAACAACGGAGGCGGCAATTGGGGTCGAGTCCACTTGATTGGCTTCAGCTTGGGCGCGCACGTTGTCGGTAACGCTGGACGACAGGCTGGTGGCAGACCCAACAGGGTTACCGGTTTGGATCCGGCTGGGCCCAGGTGGGGTGGTAACAACCAAGCCCTGAACCGTAACGCAGGAGCTTATGTGGAGGCAATCCACACCGACGGTGGTCTTCTCGGTATTTTTGACCGCATTGCTCATGGTGACTTTTACCCCAACGGTGGCAGAAACCCCCAACCGGGTTGCAGAGTTAGTACCTGCTCTCACAGTCGAGCCTACGAATTGTACGCCTCCACTGTTCGTCACAATCGTTTCGTTGGCAGACTATGTAACAACCTCAATCAGGCTCAGAACAATCAGTGCTCTGGAGGTACCTTCAACATGGGTAATGCCGTATTTGGTAAGCGCGGAAACGGAATCTACGGACTCAGAACTGGCAGCAGTTGGCCTTTCTAA
Protein
MIPGDNSHYVEGVSRYVWMPDGEGVPHLVDLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGCRVSTCSHSRAYELYASTVRHNRFVGRLCNNLNQAQNNQCSGGTFNMGNAVFGKRGNGIYGLRTGSSWPF

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
EMBL
BABH01014247    DQ149986    AAZ66799.1    DQ286554    AB076385    ABB90967.1    + More
BAC00960.1    AY945209    AAX39407.1    AY945212    EU700252    AAX39410.1    ACD80298.1    KJ638234    AIC80931.1    JF999953    AFI64307.1    KQ459602    KPI93582.1    NWSH01001649    PCG70553.1    KPI93583.1    JF999961    AFI64315.1    PCG70552.1    KQ460106    KPJ17796.1    GDQN01005586    JAT85468.1    KQ460870    KPJ11708.1    ODYU01011603    SOQ57446.1    BABH01014242    BABH01014243    BABH01014244    BABH01014245    BABH01014246    HM357825    AEA76291.1    JF303743    ADZ54059.1    KPJ17795.1    EU325553    ACB54943.1    GDQN01003467    JAT87587.1    JTDY01001188    KOB74604.1    NWSH01005705    PCG64026.1    KJ638235    AIC80932.1    PCG70554.1    JF999962    AFI64316.1    HM357826    AEA76292.1    KJ638233    AIC80930.1    KQ459589    KPI97552.1    ODYU01001007    SOQ36620.1    JI484235    AEB26286.1    PCG70555.1    AB180932    BAD22559.1    AGBW02009585    OWR50388.1    AGBW02007744    OWR54623.1    KPJ11707.1    ODYU01004467    SOQ44366.1    JF999963    AFI64317.1    PCG70556.1    OWR54624.1    OWR54622.1    JTDY01003203    KOB69951.1    KPI97551.1    NWSH01000166    PCG78872.1    GBRD01007078    JAG58743.1    PCG78876.1    PCG78877.1    KQ460622    KPJ13527.1    ODYU01000727    SOQ35960.1    GDQN01007206    JAT83848.1    KQ459585    KPI98406.1    JF999956    AFI64310.1    SOQ35962.1    GDQN01007598    JAT83456.1    JF999960    AFI64314.1    JF999954    AFI64308.1    KPJ13524.1    BABH01005987    PCG78875.1    KPI98345.1    PCG78873.1    SOQ35961.1    KJ439229    AHX25880.1    JI484236    AEB26287.1    KPI98407.1    PCG70558.1    PCG70559.1    PCG70557.1    GDQN01007430    JAT83624.1    JTDY01008208    KOB64678.1    PCG78874.1    KPJ13523.1    KPJ13522.1    JTDY01000484    KOB76966.1    BABH01005986    SOQ36622.1    AGBW02008213    OWR54002.1    SOQ36621.1    GDQN01008225    JAT82829.1    JTDY01001937    KOB72495.1    KPI98408.1    JI484231    AEB26282.1    GBRD01007079    JAG58742.1    KQ459603    KPI92733.1    KZ150473    PZC70751.1    NWSH01002009    PCG69448.1    KQ971307    EFA11061.1    NWSH01000080    PCG79823.1   
Pfam
PF00151   Lipase
Interpro
IPR000734   TAG_lipase        + More
IPR033906   Lipase_N       
IPR013818   Lipase/vitellogenin       
IPR029058   AB_hydrolase       
IPR002331   Lipase_panc       
IPR018357   Hexapep_transf_CS       
IPR002334   Allerg_PlipaseA1       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
1GPL     E-value=4.79135e-30,     Score=326

Ontologies

Topology

Subcellular location
Secreted  
Length:
312
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.25428
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02122
outside
1  -  312
 
 

Population Genetic Test Statistics

Pi
280.354005
Theta
212.589666
Tajima's D
0.997535
CLR
145.035933
CSRT
0.657617119144043
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 TFVSGACDASAK 100.00 6e-08
28556443 NQNNHQVITNGNVNSIR 100.00 3e-04
24402669 NQITTNPENTVFDAK 100.00 3e-04
28556443 VTGLDPAGPR 100.00 3e-04
28556443 WGGNNQALNR 100.00 3e-04
26280517 IAQIQAQQGGTGDPSNAK 100.00 0.022
26280517 IAGITTGISIGER 100.00 0.024
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