Gene

KWMTBOMO02586

Annotation

PREDICTED:_sodium-coupled_monocarboxylate_transporter_1-like_[Amyelois_transitella]

Location

Bomo_Chr5(+):6360799-6374080      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.988

CDS

ATGGCGGAAGATAACTTCAAATCGGACGTGGCAGATGTGAGATTTTCCCTCCAACGTTTTACCTATGTAGATTACGCTGTGTTTATTATGATGTTGACAATTTGTGGCTTAATTGGAATATATTTTGGATTCGTGAATAAACAGAAATCAACCCAGGATTACCTTATGGGTGGAAGAAACATGAAATTGGTGCCTGTTTGTTTTTCTTTAGTTGCAAGTTTCATTTCAGGTATATCTCTGCTCGGAACGCCCACAGAACTATATCTGTTCGGGACGGCTTATGTGTTCTCACTGTTCGGCGCCGTAGCAATGTCTCTTATATTAGGATCAACATTTCTACCGGTTTTTCATGAGCTCCAAATAACTTCAGTTTACGAATATTTGGAGCTGCGCTACGATAAACGAGTCAGGATATTTGGTTCAGCTATATTCAGTATATATTTGATGGCTTGGCTGCCTATAGTGATATATGTTCCGGCTTTAGCATTCAATCAAGTGACCGGATTTAACATACACATTATTTCACCGATTATTTGTTCTGTTTGCATTTTCTATACTTCCTTGGGAGGACTCAAAGCGGTTGTATGGACGGATGTGCTTCAAACCATTGTAATGGTATCAGCTATGATTTTAGTTATATTCAAAAGTACAATAATTGTGGGAGGTATCAACGAAGTTTTGAGACGAAACTGGAGTACCGACAGACTCGCGTTTCCATCTTTGACTTTTGATTTAACGGAAAGACACTCAATCTGGTCTGTGTCTATTGGTGCTACATTCTATTGGATTGGGAATATTGCTGTCAATCAATCTATGATGCAGAGGTTCCTCGCTCTCTCAGAGCTAAAGTCTGCTAAACGGGCAATTTGGGGTTTTCTTTTTGGAGTCTTCGTAATAGTTTTTATATGTGGATACAGTGGATTGGTTGCATATGCTAAGTACTATGAGTGCGATCCATTGGATTCAAAATTGGCTCTGGCTAAGGACCAGTTATTGCCGTTGTTGGTGATGGATGTATTTAACGATTGGGAAGGAATGCCCGGAATTTTTATTGCAGGAGTATTCAGCGCTGCTCTAAGTTCGTTATCAACTGGTCTTAATTCTATGGCTGCGGTAGTTTTAGAAGATTTCTGGAAGCCTTTCTGTAAAGTACCGACACCCAAACAATCTCAAATTATTGTTCGTTTAGTCGTCATCATTCTCGGCTGTATTTGTTTTGGTTTAGTGTTCGTAGTTGAAAAACTAGGTTCTGTATTACAATTAACGATGAGTTTATCTTCAGCTTCAATGGGACCTCTTGCAGGAGTGTTTCTGATGGGACTGTTCTTTCCGTTTATAGATTCAACTGATGCACTGTGTGGTGGGATAATTGGATTGCTATCCGCATGGTGGGTAACAGCACAGTCTCAATTTGCGATTGCAAAAGGTCTAATGAAGTATAATGAAAAGATCAGATTCACTAATAACTGTAGTTACACTTTTAAATCAGCAGTCGTTCATGCTACAGAGAGCAGTTCTAGCGAGGTGCCAGCTTTGTACCGTATTTCATATTTATGGTTCACTGCGCTGGGTTGTATTGTAACCGTAACGGTTGCATGTTTAGTTTCGTTAAGGACTTCGAATAAAGTTAAGCGTGACATAAGGACATTTGCTCCTGCTATTAGGAAGTACTTAAACAAACGGGAAGGAAACGATTTCAGCATGGACGAGAAATGTAGATTTAACATTATACCGGAAGCCTTCAATTGA

Protein

MAEDNFKSDVADVRFSLQRFTYVDYAVFIMMLTICGLIGIYFGFVNKQKSTQDYLMGGRNMKLVPVCFSLVASFISGISLLGTPTELYLFGTAYVFSLFGAVAMSLILGSTFLPVFHELQITSVYEYLELRYDKRVRIFGSAIFSIYLMAWLPIVIYVPALAFNQVTGFNIHIISPIICSVCIFYTSLGGLKAVVWTDVLQTIVMVSAMILVIFKSTIIVGGINEVLRRNWSTDRLAFPSLTFDLTERHSIWSVSIGATFYWIGNIAVNQSMMQRFLALSELKSAKRAIWGFLFGVFVIVFICGYSGLVAYAKYYECDPLDSKLALAKDQLLPLLVMDVFNDWEGMPGIFIAGVFSAALSSLSTGLNSMAAVVLEDFWKPFCKVPTPKQSQIIVRLVVIILGCICFGLVFVVEKLGSVLQLTMSLSSASMGPLAGVFLMGLFFPFIDSTDALCGGIIGLLSAWWVTAQSQFAIAKGLMKYNEKIRFTNNCSYTFKSAVVHATESSSSEVPALYRISYLWFTALGCIVTVTVACLVSLRTSNKVKRDIRTFAPAIRKYLNKREGNDFSMDEKCRFNIIPEAFN

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

A0A2A4JGL0   A0A2H1V6Z9   A0A194PX11   A0A194R2G2   H9IZD8   A0A182FS71   + More
Q7PX28   A0A182L8F2   A0A182QU12   W5J189   A0A182PJ36   A0A182VW47   A0A182HK72   A0A182XP36   A0A0C9R126   Q175Y8   A0A151X8I1   A0A026WWM1   A0A154PEG1   K7J4Z0   A0A182YHT2   A0A0K8V0X3   A0A3B0KJA3   F4W7J6   B5DX93   B4GLN6   B4LXL6   W8BMP0   A0A195ESL3   A0A1B0A1P5   A0A0A1XSV9   A0A182GDR0   A0A1A9VL99   A0A195EL28   A0A1Q3FSJ8   A0A0M8ZZT7   B4NAX6   A0A2P8XTX8   A0A1A9X2N1   A0A0A1WU89   A0A2J7QJP6   Q16LC9   A0A1B0FN19   A0A1I8Q4W1   A0A1Q3FSH6   B4JTK2   A0A2A3EKX1   A0A067QX91   V9IKT4   A0A1B0BA90   A0A2J7QJQ3   W8BJ82   A0A0K8VUV5   A0A084W0F7   A0A232EYM7   A0A1Q3G536   B4K9T9   A0A1A9XW60   A0A195AT73   A0A1W4XEU6   A0A1W4X5A6   A0A2A4JF18   A0A182NQW1   A0A0L0CPB2   A0A1W4WCA6   T1GHV9   B3LXC3   A0A212FLL7   A0A1I8Q8H6   A0A1I8MDU3   A0A182PGU7   A0A1J1HJW9   A0A182VWJ0   A0A0M4F4Q2   A0A1Y9IMI8   A0A182L9J4   A0A182ULS2   A0A0L0C9P3   A0A182WSB4   A0A182HL66   E2A8C5   A0A182SGA4   T1PAX5   A0A1B6DZY1   Q7PXS9   A0A1I8MZG3   A0A034V935   A0A336KMW3   A0A182RSH4   A0A182JVH7   A0A182VI42   A0A182TWQ2   A0A1B0EY77   A0A1L8DET3   A0A1A9ZES2   A0A1B0G0B1   W5J3T7   A0A1A9VCT3   A0A1B6CDJ6   E0VCA6  

Pubmed

26354079    19121390    12364791    14747013    17210077    20966253    + More
20920257    23761445    17510324    24508170    30249741    20075255    25244985    21719571    15632085    17994087    24495485    25830018    26483478    29403074    24845553    24438588    28648823    26108605    22118469    25315136    20798317    25348373    20566863   

EMBL

NWSH01001649    PCG70560.1    ODYU01001007    SOQ36623.1    KQ459589    KPI97553.1    + More
KQ460870    KPJ11709.1    BABH01014248    BABH01014249    AAAB01008987    EAA00957.5    AXCN02001489    ADMH02002189    ETN57897.1    APCN01000818    GBYB01001680    JAG71447.1    CH477393    EAT41908.1    KQ982409    KYQ56672.1    KK107105    QOIP01000011    EZA59529.1    RLU16728.1    KQ434889    KZC10252.1    GDHF01019732    JAI32582.1    OUUW01000008    SPP83838.1    GL887844    EGI69869.1    CM000070    EDY68625.1    CH479185    EDW38460.1    CH940650    EDW66800.1    GAMC01008302    JAB98253.1    KQ981986    KYN31235.1    GBXI01000171    JAD14121.1    JXUM01056488    JXUM01056489    JXUM01056490    KQ561912    KXJ77184.1    KQ978730    KYN28960.1    GFDL01004500    JAV30545.1    KQ435808    KOX72983.1    CH964232    EDW80940.1    PYGN01001356    PSN35450.1    GBXI01012207    JAD02085.1    NEVH01013550    PNF28807.1    CH477910    EAT35131.1    CCAG010013983    GFDL01004485    JAV30560.1    CH916373    EDV95092.1    KZ288217    PBC32370.1    KK852854    KDR14984.1    JR049336    AEY60929.1    JXJN01010867    PNF28804.1    GAMC01016901    JAB89654.1    GDHF01009661    JAI42653.1    ATLV01019121    KE525262    KFB43701.1    NNAY01001584    OXU23524.1    GFDL01000142    JAV34903.1    CH933806    EDW15587.1    KQ976745    KYM75423.1    PCG70561.1    JRES01000104    KNC34106.1    CAQQ02015090    CH902617    EDV42767.2    AGBW02007743    OWR54626.1    CVRI01000002    CRK86766.1    CP012526    ALC46370.1    JRES01000819    KNC28169.1    APCN01000881    GL437536    EFN70310.1    KA645849    AFP60478.1    GEDC01006078    JAS31220.1    EAA00833.5    GAKP01020702    JAC38250.1    UFQS01000652    UFQT01000652    SSX05789.1    SSX26148.1    AJVK01017786    GFDF01009115    JAV04969.1    CCAG010002737    ADMH02002131    ETN58506.1    GEDC01025774    JAS11524.1    DS235051    EEB11028.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000005204    UP000069272    UP000007062    + More
UP000075882    UP000075886    UP000000673    UP000075885    UP000075920    UP000075840    UP000076407    UP000008820    UP000075809    UP000053097    UP000279307    UP000076502    UP000002358    UP000076408    UP000268350    UP000007755    UP000001819    UP000008744    UP000008792    UP000078541    UP000092445    UP000069940    UP000249989    UP000078200    UP000078492    UP000053105    UP000007798    UP000245037    UP000091820    UP000235965    UP000092444    UP000095300    UP000001070    UP000242457    UP000027135    UP000092460    UP000030765    UP000215335    UP000009192    UP000092443    UP000078540    UP000192223    UP000075884    UP000037069    UP000192221    UP000015102    UP000007801    UP000007151    UP000095301    UP000183832    UP000092553    UP000075902    UP000075903    UP000000311    UP000075901    UP000075900    UP000075881    UP000092462    UP000009046   

PRIDE

H9IZD8   

Pfam

PF00474   SSF

Interpro

IPR001734   Na/solute_symporter        + More
IPR038377   Na/Glc_symporter_sf       
IPR018212   Na/solute_symporter_CS       

Gene 3D

1.20.1730.10    

ProteinModelPortal

A0A2A4JGL0   A0A2H1V6Z9   A0A194PX11   A0A194R2G2   H9IZD8   A0A182FS71   + More
Q7PX28   A0A182L8F2   A0A182QU12   W5J189   A0A182PJ36   A0A182VW47   A0A182HK72   A0A182XP36   A0A0C9R126   Q175Y8   A0A151X8I1   A0A026WWM1   A0A154PEG1   K7J4Z0   A0A182YHT2   A0A0K8V0X3   A0A3B0KJA3   F4W7J6   B5DX93   B4GLN6   B4LXL6   W8BMP0   A0A195ESL3   A0A1B0A1P5   A0A0A1XSV9   A0A182GDR0   A0A1A9VL99   A0A195EL28   A0A1Q3FSJ8   A0A0M8ZZT7   B4NAX6   A0A2P8XTX8   A0A1A9X2N1   A0A0A1WU89   A0A2J7QJP6   Q16LC9   A0A1B0FN19   A0A1I8Q4W1   A0A1Q3FSH6   B4JTK2   A0A2A3EKX1   A0A067QX91   V9IKT4   A0A1B0BA90   A0A2J7QJQ3   W8BJ82   A0A0K8VUV5   A0A084W0F7   A0A232EYM7   A0A1Q3G536   B4K9T9   A0A1A9XW60   A0A195AT73   A0A1W4XEU6   A0A1W4X5A6   A0A2A4JF18   A0A182NQW1   A0A0L0CPB2   A0A1W4WCA6   T1GHV9   B3LXC3   A0A212FLL7   A0A1I8Q8H6   A0A1I8MDU3   A0A182PGU7   A0A1J1HJW9   A0A182VWJ0   A0A0M4F4Q2   A0A1Y9IMI8   A0A182L9J4   A0A182ULS2   A0A0L0C9P3   A0A182WSB4   A0A182HL66   E2A8C5   A0A182SGA4   T1PAX5   A0A1B6DZY1   Q7PXS9   A0A1I8MZG3   A0A034V935   A0A336KMW3   A0A182RSH4   A0A182JVH7   A0A182VI42   A0A182TWQ2   A0A1B0EY77   A0A1L8DET3   A0A1A9ZES2   A0A1B0G0B1   W5J3T7   A0A1A9VCT3   A0A1B6CDJ6   E0VCA6  

PDB

5NVA     E-value=3.86944e-30,     Score=330

KEGG

101736690    no KO assigned | (RefSeq) sodium-coupled monocarboxylate transporter 1-like

GO

GO:0016021   GO:0022857   GO:0016020   GO:0005215   GO:0006810   GO:0008270   GO:0043565   GO:0005515   GO:0006631   GO:0006635   GO:0006281   GO:0048384   GO:0055085  

Length:

582

Number of predicted TMHs:

13

Exp number of AAs in TMHs:

285.23935

Exp number, first 60 AAs:

22.39023

Total prob of N-in:

0.00032

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  42

inside

43  -  62

TMhelix

63  -  85

outside

86  -  94

TMhelix

95  -  117

inside

118  -  137

TMhelix

138  -  160

outside

161  -  172

TMhelix

173  -  195

inside

196  -  201

TMhelix

202  -  224

outside

225  -  250

TMhelix

251  -  268

inside

269  -  288

TMhelix

289  -  311

outside

312  -  348

TMhelix

349  -  371

inside

372  -  391

TMhelix

392  -  412

outside

413  -  426

TMhelix

427  -  446

inside

447  -  450

TMhelix

451  -  473

outside

474  -  514

TMhelix

515  -  537

inside

538  -  582

 

 

Pi

298.251112

Theta

233.315201

Tajima's D

0.082438

CLR

137.810915

CSRT

0.388330583470826

Interpretation

Uncertain