Gene

KWMTBOMO02585

Pre Gene Modal

BGIBMGA002621

Annotation

PREDICTED:_sodium-coupled_monocarboxylate_transporter_1-like_[Amyelois_transitella]

Location

Bomo_Chr5(+):6347609-6358872      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.979

CDS

ATGAATGAAATCAATGGGAATGTGGAGGATATTGTAATTCAAATGCGAAGGTTCACATGGGTGGACTATGTAGTGTTTGTGTTCATGTTGGCCATAAGTGCGGTTGTCGGAGTATATTGGGGATTCATGAAGAAACAAACAACGCAGACTGATTATCTTCTGGGCGGGAGGAATATGAAAGTAGTACCGGTTTCCATGTCGCTCGTTGCAAGTTTTGTATCCGGCATAACCTTGCTTGGGTCCCCAACGGAAGTGTACATGTACGGAACTCAGTACGCATATATCATCGGTGCGATATTCCTTATGTCCGTGATAATGACACAAGTTTACCTACCTGTTTTTCATCAGCTCAAGCTCACATCTAATTATGAGTATCTTTCAATAAGATTCGATAACCGAGTTCGACTATTTGGATCGATCTTATTTGCTTTTACATTGATAGGATGGTTGCCCATTGTTATCTACGTGCCAGCATTAGCATTTAATCAAGTGACTGGAATCGGCATACATGTTATAACTCCGATAGTGTGCTTAGTTTGCATATTTTACACGAGTGCTGGAGGTCTGCAAGCCGTCGTTTGGACTGACGTTATTCAAATAACGGCAATGTTCGGTGCAATGGCAATTGTCGCTGTAAAAGGTACTATGGATGTTGGCGGTATTGGCGTTGTTTGGCAAAGGAATATGGACAGCGGAAGGATCGAAGCTCCCGACTGGGACCCCAATCCCCTAACGCGACATACAATATGGTCTTTAATCATGGGAGGGGTCATTTATTGGCTCCAAGCAAATGCTGTTAATCAGACTATGGTACAAAGATACCTCTCTCTGCCTACACTGCGTGGTGCTAAATGGGCAGTCTTCTTGTTTTGCATCGGTATATCACTACTGTACTGTTTCTGTCTTTACTGCGGTTTGTTAATCTACGCAAGATTTCACGATTGTGATCCTCTTCAAACTAAGTTGGCGAAGGCAAAGGATCAGTTATTGCCTTTGTTGGTCATGGACGTTCTTGGTGATATCCCTGGCTTACCAGGAGTGTTTGTTGCTGGCATATTCAGTGCAGCATTGAGTTCTTTGTCGACAAGTCTGAATTCAATGTCTGCTGTGGTATTGGAAGACTTCTATAAGCCTTTTTATAGCAAGGAACTTTCGGATAGACAAACAGCTTGGCTAATGAGAGGAGTGGTGATACTTCTGGGCGCGTTATGTGTAGCTCTAGTTTTCATTGTCGAAAAAATGGGGACAATATTACAGCTCACAATGACTCTAGAATCAATGACAATGGGCCCACAGCTTGGGGTTTTTACTATGGGAATACTGATGCCATGGGTCGATGCTACGGGGGCCCTGGTAGGTGGAGTCAGTGGACTCATGATAATGTCATGGTGGTGTCTCACAGCACAGCTATCGATCGCTCGTGGAGAAATAACACATGCTCATAAACCTTTAACTACCCTCGGATGTCATTATAACTACACAGTATTGGAAACAGTCGCTGTAAATGTTGGCTTGGGCGAACAAGTAAATCCTGTGCTTCGAGTTTCCTACATGTGGTATACTCTAGCTGGGGCAGTTGTCACGATGTGTGTCGGAGCCGCTGTGTCCCGAGTCAATAGAGCACGTGGGAAGCCTCATTTACCACCGGCTCCAAACCTGCTCGCTCCACAAATAAGAAGACTTCATAAGGAGCCTCCGCACCCTACTGAAGATCCATTCATCCAAGCATATGGAAATAGCAAGGAAACCTGTCTCATTAACACTACCTCAATCAACATGAAGGCTATCAAAGAAACTGCAGAGAACCGTTGA

Protein

MNEINGNVEDIVIQMRRFTWVDYVVFVFMLAISAVVGVYWGFMKKQTTQTDYLLGGRNMKVVPVSMSLVASFVSGITLLGSPTEVYMYGTQYAYIIGAIFLMSVIMTQVYLPVFHQLKLTSNYEYLSIRFDNRVRLFGSILFAFTLIGWLPIVIYVPALAFNQVTGIGIHVITPIVCLVCIFYTSAGGLQAVVWTDVIQITAMFGAMAIVAVKGTMDVGGIGVVWQRNMDSGRIEAPDWDPNPLTRHTIWSLIMGGVIYWLQANAVNQTMVQRYLSLPTLRGAKWAVFLFCIGISLLYCFCLYCGLLIYARFHDCDPLQTKLAKAKDQLLPLLVMDVLGDIPGLPGVFVAGIFSAALSSLSTSLNSMSAVVLEDFYKPFYSKELSDRQTAWLMRGVVILLGALCVALVFIVEKMGTILQLTMTLESMTMGPQLGVFTMGILMPWVDATGALVGGVSGLMIMSWWCLTAQLSIARGEITHAHKPLTTLGCHYNYTVLETVAVNVGLGEQVNPVLRVSYMWYTLAGAVVTMCVGAAVSRVNRARGKPHLPPAPNLLAPQIRRLHKEPPHPTEDPFIQAYGNSKETCLINTTSINMKAIKETAENR

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

A0A2A4JF18   A0A2H1V6Z9   A0A194PXS0   A0A194R391   A0A212FLL7   N6U086   + More
Q16LC9   A0A1Q3FSJ8   Q175Y8   A0A182QU12   A0A182PGU7   A0A182WSB4   A0A1Y9IMI8   A0A182ULS2   A0A182HL66   A0A182L9J4   W5J3T7   Q7PXS9   A0A182JVH7   A0A182VWJ0   A0A1Q3FSH6   A0A182PJ36   A0A1W4X5A6   A0A182FS71   W5J189   A0A1W4XEU6   A0A1B0EY77   A0A182VW47   A0A182YHT2   A0A182L8F2   A0A067QX91   A0A182GDR0   A0A1B0BA90   B4K9T9   K7J4Z0   A0A1A9XW60   A0A1B0A1P5   Q7PX28   A0A1J1HJW9   A0A3B0KJA3   A0A182FRF2   B4JTK2   A0A2J7QJQ3   A0A1A9VL99   B5DX93   B4GLN6   A0A182HK72   A0A182XP36   B4LXL6   A0A1B0FN19   B3LXC3   A0A1I8Q4W1   A0A0L0CPB2   A0A0K8VUV5   A0A0A1WU89   A0A1A9X2N1   A0A0L0C9P3   W8BJ82   A0A026WWM1   A0A0K8V0X3   A0A1W4WCA6   A0A1I8MDU3   B4NAX6   A0A232EYM7   A0A1B6DZY1   A0A1Q3G536   A0A151X8I1   F4W7J6   D6WN37   A0A182YAF1   A0A2J7QJP6   A0A195ESL3   A0A034V935   A0A0A1XSV9   A0A1I8Q8H6   A0A1B6CDJ6   A0A1I8MZG3   A0A336MH13   W8BMP0   T1PAX5   T1GHV9   A0A0C9R126   A0A195EL28   A0A2P8XTX8   Q9VGP3   A0A182NQW1   B4HI97   B0WTA4   A0A0M8ZZT7   Q8SXL4   A0A084W0F7   A0A1B6L137   A0A154PEG1   A0A1A9VCT3   B3NZF3   A0A0M4F4Q2   A0A1A9ZES2   B4PM52   A0A2A3EKX1   V9IKT4  

Pubmed

26354079    22118469    23537049    17510324    20966253    20920257    + More
23761445    12364791    14747013    17210077    25244985    24845553    26483478    17994087    20075255    15632085    26108605    25830018    24495485    24508170    30249741    25315136    28648823    21719571    18362917    19820115    25348373    29403074    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24438588    17550304   

EMBL

NWSH01001649    PCG70561.1    ODYU01001007    SOQ36623.1    KQ459589    KPI97554.1    + More
KQ460870    KPJ11710.1    AGBW02007743    OWR54626.1    APGK01054233    APGK01054234    APGK01054235    APGK01054236    KB741248    ENN71947.1    CH477910    EAT35131.1    GFDL01004500    JAV30545.1    CH477393    EAT41908.1    AXCN02001489    APCN01000881    ADMH02002131    ETN58506.1    AAAB01008987    EAA00833.5    GFDL01004485    JAV30560.1    ADMH02002189    ETN57897.1    AJVK01017786    KK852854    KDR14984.1    JXUM01056488    JXUM01056489    JXUM01056490    KQ561912    KXJ77184.1    JXJN01010867    CH933806    EDW15587.1    EAA00957.5    CVRI01000002    CRK86766.1    OUUW01000008    SPP83838.1    CH916373    EDV95092.1    NEVH01013550    PNF28804.1    CM000070    EDY68625.1    CH479185    EDW38460.1    APCN01000818    CH940650    EDW66800.1    CCAG010013983    CH902617    EDV42767.2    JRES01000104    KNC34106.1    GDHF01009661    JAI42653.1    GBXI01012207    JAD02085.1    JRES01000819    KNC28169.1    GAMC01016901    JAB89654.1    KK107105    QOIP01000011    EZA59529.1    RLU16728.1    GDHF01019732    JAI32582.1    CH964232    EDW80940.1    NNAY01001584    OXU23524.1    GEDC01006078    JAS31220.1    GFDL01000142    JAV34903.1    KQ982409    KYQ56672.1    GL887844    EGI69869.1    KQ971343    EFA03242.2    PNF28807.1    KQ981986    KYN31235.1    GAKP01020702    JAC38250.1    GBXI01000171    JAD14121.1    GEDC01025774    JAS11524.1    UFQT01001169    SSX29240.1    GAMC01008302    JAB98253.1    KA645849    AFP60478.1    CAQQ02015090    GBYB01001680    JAG71447.1    KQ978730    KYN28960.1    PYGN01001356    PSN35450.1    AE014297    BT056234    AAF54633.1    ACL68681.1    CH480815    EDW42612.1    DS232083    EDS34332.1    KQ435808    KOX72983.1    AY089573    AAL90311.1    ATLV01019121    KE525262    KFB43701.1    GEBQ01022591    JAT17386.1    KQ434889    KZC10252.1    CH954181    EDV49526.1    CP012526    ALC46370.1    CM000160    EDW96918.1    KZ288217    PBC32370.1    JR049336    AEY60929.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000019118    UP000008820    + More
UP000075886    UP000075885    UP000076407    UP000075902    UP000075903    UP000075840    UP000075882    UP000000673    UP000007062    UP000075881    UP000075920    UP000192223    UP000069272    UP000092462    UP000076408    UP000027135    UP000069940    UP000249989    UP000092460    UP000009192    UP000002358    UP000092443    UP000092445    UP000183832    UP000268350    UP000001070    UP000235965    UP000078200    UP000001819    UP000008744    UP000008792    UP000092444    UP000007801    UP000095300    UP000037069    UP000091820    UP000053097    UP000279307    UP000192221    UP000095301    UP000007798    UP000215335    UP000075809    UP000007755    UP000007266    UP000078541    UP000015102    UP000078492    UP000245037    UP000000803    UP000075884    UP000001292    UP000002320    UP000053105    UP000030765    UP000076502    UP000008711    UP000092553    UP000002282    UP000242457   

PRIDE

Q9VGP3    Q8SXL4   

Pfam

PF00474   SSF

Interpro

IPR038377   Na/Glc_symporter_sf        + More
IPR001734   Na/solute_symporter       

Gene 3D

1.20.1730.10    

ProteinModelPortal

A0A2A4JF18   A0A2H1V6Z9   A0A194PXS0   A0A194R391   A0A212FLL7   N6U086   + More
Q16LC9   A0A1Q3FSJ8   Q175Y8   A0A182QU12   A0A182PGU7   A0A182WSB4   A0A1Y9IMI8   A0A182ULS2   A0A182HL66   A0A182L9J4   W5J3T7   Q7PXS9   A0A182JVH7   A0A182VWJ0   A0A1Q3FSH6   A0A182PJ36   A0A1W4X5A6   A0A182FS71   W5J189   A0A1W4XEU6   A0A1B0EY77   A0A182VW47   A0A182YHT2   A0A182L8F2   A0A067QX91   A0A182GDR0   A0A1B0BA90   B4K9T9   K7J4Z0   A0A1A9XW60   A0A1B0A1P5   Q7PX28   A0A1J1HJW9   A0A3B0KJA3   A0A182FRF2   B4JTK2   A0A2J7QJQ3   A0A1A9VL99   B5DX93   B4GLN6   A0A182HK72   A0A182XP36   B4LXL6   A0A1B0FN19   B3LXC3   A0A1I8Q4W1   A0A0L0CPB2   A0A0K8VUV5   A0A0A1WU89   A0A1A9X2N1   A0A0L0C9P3   W8BJ82   A0A026WWM1   A0A0K8V0X3   A0A1W4WCA6   A0A1I8MDU3   B4NAX6   A0A232EYM7   A0A1B6DZY1   A0A1Q3G536   A0A151X8I1   F4W7J6   D6WN37   A0A182YAF1   A0A2J7QJP6   A0A195ESL3   A0A034V935   A0A0A1XSV9   A0A1I8Q8H6   A0A1B6CDJ6   A0A1I8MZG3   A0A336MH13   W8BMP0   T1PAX5   T1GHV9   A0A0C9R126   A0A195EL28   A0A2P8XTX8   Q9VGP3   A0A182NQW1   B4HI97   B0WTA4   A0A0M8ZZT7   Q8SXL4   A0A084W0F7   A0A1B6L137   A0A154PEG1   A0A1A9VCT3   B3NZF3   A0A0M4F4Q2   A0A1A9ZES2   B4PM52   A0A2A3EKX1   V9IKT4  

PDB

5NVA     E-value=2.31234e-29,     Score=323

KEGG

101738232    no KO assigned | (RefSeq) sodium-coupled monocarboxylate transporter 1-like

GO

GO:0022857   GO:0016021   GO:0016020   GO:0005215   GO:0006810   GO:0008270   GO:0043565   GO:0005515   GO:0006631   GO:0006635   GO:0006281   GO:0048384   GO:0055085  

Length:

603

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

277.08604

Exp number, first 60 AAs:

22.79313

Total prob of N-in:

0.07754

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  42

inside

43  -  62

TMhelix

63  -  82

outside

83  -  91

TMhelix

92  -  114

inside

115  -  134

TMhelix

135  -  157

outside

158  -  166

TMhelix

167  -  189

inside

190  -  201

TMhelix

202  -  224

outside

225  -  243

TMhelix

244  -  266

inside

267  -  286

TMhelix

287  -  309

outside

310  -  389

TMhelix

390  -  412

inside

413  -  432

TMhelix

433  -  455

outside

456  -  516

TMhelix

517  -  536

inside

537  -  603

 

 

Pi

200.760047

Theta

178.4958

Tajima's D

0.24229

CLR

0.026865

CSRT

0.439278036098195

Interpretation

Uncertain