Gene

KWMTBOMO02576

Pre Gene Modal

BGIBMGA002617

Annotation

Leucine-rich_transmembrane_protein_[Operophtera_brumata]

Location

Bomo_Chr5(+):6057099-6060400      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.951

CDS

ATGTTACGACTGTCCAGCGTATGGATTATTCTGATATCATGGAATTTGTTAGCGCTTGCAAGAAGCTTGGATGACGATGACAAAACCATAGGAGATTTGTGTTTTCTATGCAGATGTAATCTAGATAAAACTGATATTGATTGTTCACGTAGAGGCCTCACGGACATCCCCAATGGATTGGGATTACAGGTGACCAAACTGAACATTTCGAATAATGAGTTTACAAAATTTCCCGAGTCTCTGAGCAGACTCCACAACCTCGTGAATTTGGATATTAGCAGCAACCAATTGAAGGGATTGCCTGACAATGCGCTTTACAATTTAACAGCGCTCGAAGTGCTGAATTTATCAAGAAATTACTTTGATTCGTGGCTTAATTTGAATCCGAACGATGTACTGCTCCCGGCTACACACTTGAAAATTCTGGACCTGTCGTTTAACAAATTTCAGACTATGGGCAATTTGGCCAATCAAGAATTATTGATCAGCCCATCCCTGGAAACGTTAATATTAGATCATTGTGAAATAAATTCCATACATGGTAGGTCTCCATTAAGTGGTCTGATAAACATAAGAGTTCTAAAGTTGAACTTCAATCCTTTATTGAGAATACAAAATTTAATATCGTCATCCCTGAGGAGTCTTTTCGTTAGTAACTGTGAGCTGACCTCATTAAATCATAACGAGTTGATGTTCTTACCTTCGTTGACTCATTTAAAAATGTCAAATAACTATCGTCTCGAGTTAGCGTCTTCAGCGAACAATTTGTTTTCGCAATCATTGAAATATATCGATATTTCATACTGTAATATTTTGCAACCGAACCTCAAGGGGTTCCCTAGTTTGCGAAAAGCTATCCTAAATCACAATATGGTTAGGTATTTAGAAAGTAACGCTTTTGCTAACAATACAGAATTGGAATATTTGGATTTGTCCAATAACAACATTGCGTCGCTTAGATACGATACGTTTCGAGGACTGAAGATGCTGAAACACTTGGATTTATCTTGGAACGAAATCGCTGTGATTCCAGAAGATAGCTTATTGGAAATGCCGTCTTTGACGCAATTGAAATTATCCAGAAATTACCTGTCGAGAGTTGGTCACTTGAGATCAATGTCTGTAACGATTCTCGATATGAGTTCATGTGAATTAAATACAATCGGTAAAGATTCACTGGAGGGCTTGCAGTCGATTGTTGAATTAGATTTGTCTCAGAATCTGCTGTCTTATATTCCGGATAGTATTTCTTCGAACACTTTGAAATACCTTAATTTGAATTATAATCGAATTAGCAGCATCAATAATTTAACGTTTTTCATGTTGAATCGGTTGACTAGCTTAAGCGTGGTCGGTAACAGATTCACTATGATCTGGCGGAGATCGTTTTTCGATTCCAATCCATATTTGGAAAGACTGGATTTGAGTGACAACATGTGGAGATGTGATTGCTCCGATGAGAACATGAGGGACTTTTACGACTTTGTCACTTTAGAACCAAATAAAAAAGAAGAATCGTTCAATCTTATATGCAATAGTCCGGCTAATGTGAACACGCAGACGTGGCTCGAGGCGTGTTACTTTACTTGGAATCCCACCGAAAAAACCGCTAACGCAGACACTTTAATATGGTTTATTGTTGTCATGATCATAGGCTTGTCCTTGTGTATATTATTAGTGAGCGGAATCCGAAGTTCGATGAAACGTCGTCTTGCCGCCATACAAGCAGAAAGGGAAAGGCAAGTGGAAGAAGCTAGAGACAGATTGAGGCAAATGAGAATACGTGCGGAACAGGAAGCGTTATGTAATACACCAGATCCACGTGATTTGATCGCGCCACCGTCGTACGATGAAGCTCTCTCGATGCCAAAACTAAATGTATCGTGTCACTCTTTGAACGAAACCGGTTCAGGAAAAACCAGGAGAAAGAGAGGGAGAAGGAAAACGAAATCGAGTGGTGATCTATTAGAAGAAACTGACAGGAACGGTGATGCACCCGTATATGATGATTTAGAACTAACCGAGACCCAAGAGGAAGATAGACAGCGGAGGCGTCGTAGAAGAAATAGAAGGTATGGCAGTCACGAAATAGCTGAGTTGGATCAATCACCAGGTGCTCGGCGTCGGCGAATGTCTGAATATATTGTTGAAAACGATGATAGTGTTATTGTGGAAGTTCAAGCGCAGTTAGAACGACCCCTTCGCCCTAGAAATCGACGGTATTCGATTGATGATAATGATGTCAGGGAAAGTGACTTTTAA

Protein

MLRLSSVWIILISWNLLALARSLDDDDKTIGDLCFLCRCNLDKTDIDCSRRGLTDIPNGLGLQVTKLNISNNEFTKFPESLSRLHNLVNLDISSNQLKGLPDNALYNLTALEVLNLSRNYFDSWLNLNPNDVLLPATHLKILDLSFNKFQTMGNLANQELLISPSLETLILDHCEINSIHGRSPLSGLINIRVLKLNFNPLLRIQNLISSSLRSLFVSNCELTSLNHNELMFLPSLTHLKMSNNYRLELASSANNLFSQSLKYIDISYCNILQPNLKGFPSLRKAILNHNMVRYLESNAFANNTELEYLDLSNNNIASLRYDTFRGLKMLKHLDLSWNEIAVIPEDSLLEMPSLTQLKLSRNYLSRVGHLRSMSVTILDMSSCELNTIGKDSLEGLQSIVELDLSQNLLSYIPDSISSNTLKYLNLNYNRISSINNLTFFMLNRLTSLSVVGNRFTMIWRRSFFDSNPYLERLDLSDNMWRCDCSDENMRDFYDFVTLEPNKKEESFNLICNSPANVNTQTWLEACYFTWNPTEKTANADTLIWFIVVMIIGLSLCILLVSGIRSSMKRRLAAIQAERERQVEEARDRLRQMRIRAEQEALCNTPDPRDLIAPPSYDEALSMPKLNVSCHSLNETGSGKTRRKRGRRKTKSSGDLLEETDRNGDAPVYDDLELTETQEEDRQRRRRRRNRRYGSHEIAELDQSPGARRRRMSEYIVENDDSVIVEVQAQLERPLRPRNRRYSIDDNDVRESDF

Uniprot

H9IZD2   A0A0L7LFH5   A0A2A4JTJ7   A0A194PX25   A0A194R775   A0A212FIC6   + More
A0A2A4JSX3   A0A182WBM5   A0A084WME0   A0A182ILK9   A0A182QTC0   A0A182MDK7   A0A1L8E346   A0A1L8E2N7   A0A1J1IV27   A0A182Y2G5   A0A182K9M6   A0A182GHR5   A0A182T5N2   A0A182UA85   A0A182I4M2   A0A182LK98   A0A182X4M4   A0A182PDK3   Q7Q550   A0A182UY22   A0A182FE87   Q16N44   A0A182NI65   A0A336L4B8   A0A182RDJ6   A0A336MRI8   A0A336LN13   W5JKA8   A0A0A1XNW5   A0A1Q3FIK0   A0A0K8V866   W8ANJ8   A0A034VF37   A0A1L8ECM0   A0A0L0BLV1   B4MJH5   A0A1W4VPR4   A0A1I8Q638   A0A1Y1MES8   Q7JWP9   B4MFR7   B4QH39   A0A0J9RI83   B4I828   A0A3B0JP36   B3MGJ5   T1PHD3   A0A1W4X2F3   A0A0R1DYU0   B4P7V9   B4KS89   B4J9Q6   A0A1A9X3D3   A0A2J7PEP5   B0WEF0   Q28XT0   B4GHI8   E2ABP8   A0A067R328   A0A0M4EE59   A0A154P063   A0A2P8XJQ4   A0A088AHC2   D6W899   A0A1B0BPI2   V5GLJ8   A0A2A3E6Q6   A0A1B0G2J5   A0A0L7R3Z0   A0A026X1N5   K7IWN6   A0A158NTA2   A0A195BUR1   E2BXT9   A0A232F9Q1   A0A151K0N0   A0A195E375   E9INY4   A0A3L8D2K2   F4WH12   A0A1A9YC90   A0A195C981   A0A1B6CQQ4   A0A0N0BF34   A0A2S2Q1G6   A0A0C9RF18   U4UKL1  

Pubmed

19121390    26227816    26354079    22118469    24438588    25244985    + More
26483478    20966253    12364791    14747013    17210077    17510324    20920257    23761445    25830018    24495485    25348373    26108605    17994087    18057021    28004739    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25315136    17550304    15632085    23185243    20798317    24845553    29403074    18362917    19820115    24508170    20075255    21347285    28648823    21282665    30249741    21719571    23537049   

EMBL

BABH01014279    JTDY01001321    KOB74207.1    NWSH01000701    PCG74712.1    KQ459589    + More
KPI97563.1    KQ460870    KPJ11721.1    AGBW02008398    OWR53487.1    PCG74714.1    ATLV01024426    KE525352    KFB51384.1    AXCN02000396    AXCM01002092    GFDF01001082    JAV13002.1    GFDF01001081    JAV13003.1    CVRI01000059    CRL03562.1    JXUM01064471    KQ562299    KXJ76207.1    APCN01002331    AAAB01008960    EAA11654.4    CH477840    EAT35763.1    UFQS01001766    UFQT01001766    SSX12269.1    SSX31720.1    SSX12268.1    SSX31719.1    UFQS01000086    UFQT01000086    SSW99090.1    SSX19472.1    ADMH02000963    ETN64561.1    GBXI01006233    GBXI01001712    JAD08059.1    JAD12580.1    GFDL01007648    JAV27397.1    GDHF01017559    GDHF01011804    JAI34755.1    JAI40510.1    GAMC01016181    GAMC01016180    JAB90375.1    GAKP01018784    GAKP01018783    JAC40168.1    GFDG01002496    JAV16303.1    JRES01001695    KNC20903.1    CH963846    EDW72264.2    KRF97520.1    GEZM01037951    JAV81827.1    AE013599    AY113398    AAF46828.1    AAM29403.1    CH940667    EDW57238.1    CM000362    EDX08185.1    CM002911    KMY95758.1    KMY95759.1    CH480824    EDW56753.1    OUUW01000001    SPP75086.1    CH902619    EDV35738.1    KA648089    AFP62718.1    CM000158    KRK00324.1    EDW92114.2    CH933808    EDW08371.1    KRG04080.1    CH916367    EDW01470.1    NEVH01026092    PNF14792.1    DS231908    EDS45577.1    CM000071    EAL26235.2    KRT02932.1    CH479183    EDW35958.1    GL438334    EFN69150.1    KK852945    KDR13470.1    CP012524    ALC41401.1    KQ434786    KZC05251.1    PYGN01001905    PSN32239.1    KQ971307    EFA10916.1    JXJN01017977    JXJN01017978    GALX01003537    JAB64929.1    KZ288365    PBC26849.1    CCAG010013112    KQ414659    KOC65605.1    KK107061    EZA61304.1    ADTU01025763    KQ976409    KYM90948.1    GL451314    EFN79496.1    NNAY01000653    OXU27168.1    KQ981248    KYN44260.1    KQ979701    KYN19598.1    GL764397    EFZ17768.1    QOIP01000014    RLU14735.1    GL888148    EGI66491.1    KQ978072    KYM97270.1    GEDC01021429    JAS15869.1    KQ435819    KOX72498.1    GGMS01002414    MBY71617.1    GBYB01006980    JAG76747.1    KB632399    ERL94614.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000075920    UP000030765    UP000075880    UP000075886    UP000075883    UP000183832    UP000076408    UP000075881    UP000069940    UP000249989    UP000075901    UP000075902    UP000075840    UP000075882    UP000076407    UP000075885    UP000007062    UP000075903    UP000069272    UP000008820    UP000075884    UP000075900    UP000000673    UP000037069    UP000007798    UP000192221    UP000095300    UP000000803    UP000008792    UP000000304    UP000001292    UP000268350    UP000007801    UP000095301    UP000192223    UP000002282    UP000009192    UP000001070    UP000091820    UP000235965    UP000002320    UP000001819    UP000008744    UP000000311    UP000027135    UP000092553    UP000076502    UP000245037    UP000005203    UP000007266    UP000092460    UP000242457    UP000092444    UP000053825    UP000053097    UP000002358    UP000005205    UP000078540    UP000008237    UP000215335    UP000078541    UP000078492    UP000279307    UP000007755    UP000092443    UP000078542    UP000053105    UP000030742   

PRIDE

H9IZD2    Q7JWP9   

Pfam

PF13306   LRR_5        + More
PF13855   LRR_8
PF13516   LRR_6
PF01462   LRRNT
PF00560   LRR_1
PF12799   LRR_4
PF15957   Comm

Interpro

IPR032675   LRR_dom_sf        + More
IPR026906   LRR_5       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR000372   LRRNT       
IPR000483   Cys-rich_flank_reg_C       
IPR025875   Leu-rich_rpt_4       
IPR031878   Commissureless       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9IZD2   A0A0L7LFH5   A0A2A4JTJ7   A0A194PX25   A0A194R775   A0A212FIC6   + More
A0A2A4JSX3   A0A182WBM5   A0A084WME0   A0A182ILK9   A0A182QTC0   A0A182MDK7   A0A1L8E346   A0A1L8E2N7   A0A1J1IV27   A0A182Y2G5   A0A182K9M6   A0A182GHR5   A0A182T5N2   A0A182UA85   A0A182I4M2   A0A182LK98   A0A182X4M4   A0A182PDK3   Q7Q550   A0A182UY22   A0A182FE87   Q16N44   A0A182NI65   A0A336L4B8   A0A182RDJ6   A0A336MRI8   A0A336LN13   W5JKA8   A0A0A1XNW5   A0A1Q3FIK0   A0A0K8V866   W8ANJ8   A0A034VF37   A0A1L8ECM0   A0A0L0BLV1   B4MJH5   A0A1W4VPR4   A0A1I8Q638   A0A1Y1MES8   Q7JWP9   B4MFR7   B4QH39   A0A0J9RI83   B4I828   A0A3B0JP36   B3MGJ5   T1PHD3   A0A1W4X2F3   A0A0R1DYU0   B4P7V9   B4KS89   B4J9Q6   A0A1A9X3D3   A0A2J7PEP5   B0WEF0   Q28XT0   B4GHI8   E2ABP8   A0A067R328   A0A0M4EE59   A0A154P063   A0A2P8XJQ4   A0A088AHC2   D6W899   A0A1B0BPI2   V5GLJ8   A0A2A3E6Q6   A0A1B0G2J5   A0A0L7R3Z0   A0A026X1N5   K7IWN6   A0A158NTA2   A0A195BUR1   E2BXT9   A0A232F9Q1   A0A151K0N0   A0A195E375   E9INY4   A0A3L8D2K2   F4WH12   A0A1A9YC90   A0A195C981   A0A1B6CQQ4   A0A0N0BF34   A0A2S2Q1G6   A0A0C9RF18   U4UKL1  

PDB

4KT1     E-value=1.75985e-19,     Score=239

KEGG

101737604    no KO assigned | (RefSeq) insulin-like growth factor-binding protein complex acid labile subunit

GO

GO:0016021   GO:0007411   GO:0005515   GO:0008270   GO:0006470   GO:0008138   GO:0004725   GO:0006172   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

SignalP

Position:   1 - 20,         Likelihood:  0.992881

 

 

Length:

753

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

23.77129

Exp number, first 60 AAs:

0.48235

Total prob of N-in:

0.02630

outside

1  -  540

TMhelix

541  -  563

inside

564  -  753

 

 

Pi

28.853052

Theta

20.851589

Tajima's D

0.648995

CLR

0.576428

CSRT

0.56287185640718

Interpretation

Uncertain