Gene

KWMTBOMO02575

Pre Gene Modal

BGIBMGA002616

Annotation

PREDICTED:_uncharacterized_protein_LOC106123880_[Papilio_xuthus]

Location

Bomo_Chr5(+):6051809-6055334      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.827 PlasmaMembrane   Reliability : 1.896

CDS

ATGGATTTTGGAGTTTTCAGAACCAGACTACTGCTCTGGCTTTTGCCCGGGATGGTGACTGGTGGATTGGTTCGCCGAACGACTGATGAGCAAGAGGAAATGCCCTGCAGTACTTATACCCTAAACGGACTAATCTATCTCGACTGCAATGAGAGAGGGCTTAGTGAACTACCTGAAGGCTTGAACTATGAGTCACAAGTGCTCATTTTAACGAACAACAACTTCGCAACGTTTCCGTCGCAATTGGAAAGCTTCTCGCGCGTGCAAGTATTGGATCTATCCGGTAACCATTTGAACGTGCCGTTGCCCAGCTACATAGAAAATTGGACCAGCCTAAACACGCTTAATTTATCGAACAACAATTACGAAAGTTGGCTAAACGATGGCCGCCAATACAAATTCAGAAGACTGGATCTGTCGAGGAACAAAATAAAAAACATTGAAGAAGATTCGTTCAGTGGAATGACCAATTTGTATTTCTTAGATCTCTCTGAGAATAGAATAAACGAGTTCTCTCCGAAACTCCTTACGGCGGCAAAAAGTTTGAACACACTCAGATTAAGTCGAAACTATTTGTCTGAATTACCGAAATTTCAATCGAATTCCCTGAGGAGTCTTCATCTAAGCTATTGTTTGATCACAAACTTACAGGTCGATTCTCTGTCAGAAATGACTTCGCTGCTCGAAATCGACCTATCTTCGAACCAAATTGAAAGCATACCAGATAATTTTTCGTCCAACACTCTCCAGGAATTGGACTTGAGCTATAATGAAATTGGCTCGCTAACTGACCGCACGTTCTCGTCACTACCCCACTTAGCGGTATTGAACTTGAGAGGGAACGAGTTCAGGGAGGTTTGGTCCACCTCACACTTCGCCTCGAATCCATTTCTGAGGGAAGTCCACGTGAAGGGAAACCGATGGAACTGCGAAGGCTTTAGCGTTAATCTTTTGCTCACTTACGAGTTCCTCACGAAAGAACCTTCGAAAATTCACGATAGAGCTTCCCTGATTTGCTACGCGCCATCGAACGTGACTCAGCTGAGTTGGCAGCAGGCGTACATACAAACATGGCACCCCAACGCGTCTACAGTTGAATCTTATACGACACTGGCAGCTATGGTCGGTATTATCATTGGTATAGTGGTGACATCGTTAATTTGTCGGGGCATAATTGCTATAAACAAACCGGATCCTCCGAGGCCTGAAACTGAGACGACTATTGTGAATCTCAACGGAACGCCACAATCGCGGGCCGAGTCGGTCGTGATGAGAGTGCCTCTGCGTGATGAGGACCTGCCTCCGACGTACGACGAGGCTCTATTGATGCCGCGATTGAATTCGTCATTCCATTCACTGCCCGATTTTGTGGACGATGAACCTAGTCAACGTTCTCGGAGGTCAAGATCTATTGGAGACCTTACGGAGCACAGGCCAAGAGTGAGCGATCGGCGGTCTGTGAGGCGAACCGTCGAAATACATATAACCTGA

Protein

MDFGVFRTRLLLWLLPGMVTGGLVRRTTDEQEEMPCSTYTLNGLIYLDCNERGLSELPEGLNYESQVLILTNNNFATFPSQLESFSRVQVLDLSGNHLNVPLPSYIENWTSLNTLNLSNNNYESWLNDGRQYKFRRLDLSRNKIKNIEEDSFSGMTNLYFLDLSENRINEFSPKLLTAAKSLNTLRLSRNYLSELPKFQSNSLRSLHLSYCLITNLQVDSLSEMTSLLEIDLSSNQIESIPDNFSSNTLQELDLSYNEIGSLTDRTFSSLPHLAVLNLRGNEFREVWSTSHFASNPFLREVHVKGNRWNCEGFSVNLLLTYEFLTKEPSKIHDRASLICYAPSNVTQLSWQQAYIQTWHPNASTVESYTTLAAMVGIIIGIVVTSLICRGIIAINKPDPPRPETETTIVNLNGTPQSRAESVVMRVPLRDEDLPPTYDEALLMPRLNSSFHSLPDFVDDEPSQRSRRSRSIGDLTEHRPRVSDRRSVRRTVEIHIT

Uniprot

H9IZD1   A0A2H1WS53   A0A2A4JTH7   A0A0L7LFH5   A0A194R202   A0A194PXT6   + More
A0A212FID3   A0A2A4JSX3   A0A1L8E2N7   W8ANJ8   A0A0K8V866   T1PHD3   A0A034VF37   A0A1A9X3D3   A0A1B0G2J5   A0A1B0BPI2   Q7JWP9   A0A1W4VPR4   B4KS89   B4MJH5   A0A088AHC2   A0A0L7R3Z0   A0A2A3E6Q6   B3MGJ5   E2ABP8   U4UKL1   N6U8B9  

Pubmed

19121390    26227816    26354079    22118469    24495485    25315136    + More
25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    18057021    20798317    23537049   

EMBL

BABH01014279    ODYU01010644    SOQ55891.1    NWSH01000701    PCG74710.1    JTDY01001321    + More
KOB74207.1    KQ460870    KPJ11722.1    KQ459589    KPI97564.1    AGBW02008398    OWR53488.1    PCG74714.1    GFDF01001081    JAV13003.1    GAMC01016181    GAMC01016180    JAB90375.1    GDHF01017559    GDHF01011804    JAI34755.1    JAI40510.1    KA648089    AFP62718.1    GAKP01018784    GAKP01018783    JAC40168.1    CCAG010013112    JXJN01017977    JXJN01017978    AE013599    AY113398    AAF46828.1    AAM29403.1    CH933808    EDW08371.1    KRG04080.1    CH963846    EDW72264.2    KRF97520.1    KQ414659    KOC65605.1    KZ288365    PBC26849.1    CH902619    EDV35738.1    GL438334    EFN69150.1    KB632399    ERL94614.1    APGK01039175    KB740967    ENN76896.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000007151    + More
UP000095301    UP000091820    UP000092444    UP000092460    UP000000803    UP000192221    UP000009192    UP000007798    UP000005203    UP000053825    UP000242457    UP000007801    UP000000311    UP000030742    UP000019118   

PRIDE

H9IZD1    Q7JWP9   

Pfam

PF13855   LRR_8        + More
PF13516   LRR_6
PF00560   LRR_1
PF13306   LRR_5
PF01462   LRRNT
PF12799   LRR_4

Interpro

IPR001611   Leu-rich_rpt        + More
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR032675   LRR_dom_sf       
IPR026906   LRR_5       
IPR000372   LRRNT       
IPR000483   Cys-rich_flank_reg_C       
IPR025875   Leu-rich_rpt_4       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9IZD1   A0A2H1WS53   A0A2A4JTH7   A0A0L7LFH5   A0A194R202   A0A194PXT6   + More
A0A212FID3   A0A2A4JSX3   A0A1L8E2N7   W8ANJ8   A0A0K8V866   T1PHD3   A0A034VF37   A0A1A9X3D3   A0A1B0G2J5   A0A1B0BPI2   Q7JWP9   A0A1W4VPR4   B4KS89   B4MJH5   A0A088AHC2   A0A0L7R3Z0   A0A2A3E6Q6   B3MGJ5   E2ABP8   U4UKL1   N6U8B9  

PDB

4KT1     E-value=1.08445e-15,     Score=204

KEGG

101737747    no KO assigned | (RefSeq) leucine-rich repeat-containing G-protein coupled receptor 4-like

GO

GO:0016021   GO:0005515   GO:0008270   GO:0006470   GO:0008138   GO:0004725   GO:0006172   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

SignalP

Position:   1 - 21,         Likelihood:  0.791748

 

 

Length:

496

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.79346

Exp number, first 60 AAs:

0.65436

Total prob of N-in:

0.05510

outside

1  -  370

TMhelix

371  -  393

inside

394  -  496

 

 

Pi

28.272763

Theta

202.594945

Tajima's D

2.262325

CLR

1.091629

CSRT

0.92020398980051

Interpretation

Uncertain