Gene

KWMTBOMO02569

Pre Gene Modal

BGIBMGA002678

Annotation

shc_transforming_protein_[Danaus_plexippus]

Location

Bomo_Chr5(-):5659093-5663616      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 0.793

CDS

ATGGCGGAAAGTGGATCATTTGTGGCCAAGCCGGCGCGGGGTTGGTTGCATCCCGACTCAGTATTAGCCTCCGACGGAGTAACGTATGCCGTCAGGTATATTGGGTGCATGGAAGTTTTAACATCGATGAAAAAATTAGACTTCGATACCAGATCACAAGTTGCCAAGGAATGCATAGCAAGAGTATGTGCAGCCGCAGGTCTTCGTTCCGCGGATAAGAAGCGTCGTGTGTCTCAAGCAGCCGCCCGTGCGCTTACGGCCAGACCGCGCATGTCCCATTCGGGCGCCAACGTCGCCCTAACCGTATCATCGAAAGCAATAACCCTGGCGGTTCTGGAAGGCGGCGACACCATAGCGCGACACGACATGCCCAGAGTATCGTTTGCCTCGGGCGGAGATGCGGATTCGTTAGACTATGTAGCGTACGTGGCCAAATCAGCTCCACCGACGGAGTGGAGAGCGTGCTACGTTCTAGAATGCGGTGGAAGACTGGCGCAAGACGTGATAGCGACGATAGGACAGGCCTTCGAGTTGCGTTTTAAGGAATTTTTAACGAAACCCTCGACATTAAATCTCAATGGATCTCTGCCCAGCTGCGAAAGCGCTTGTGGGCTAGTGGAGGACAGAGAGTATTACAACGACATGCCGGACAAGGTGCCGCCCGAGCTGGCGCCGACTTCGCACCGCCACCCCCCGCCCCCGCCCCTCGCCTCGCTGACGTCACTCGCACCGCTCTCCTCGTACGTAAAAGATCAATTAAAAACATCGAACTGTTAA

Protein

MAESGSFVAKPARGWLHPDSVLASDGVTYAVRYIGCMEVLTSMKKLDFDTRSQVAKECIARVCAAAGLRSADKKRRVSQAAARALTARPRMSHSGANVALTVSSKAITLAVLEGGDTIARHDMPRVSFASGGDADSLDYVAYVAKSAPPTEWRACYVLECGGRLAQDVIATIGQAFELRFKEFLTKPSTLNLNGSLPSCESACGLVEDREYYNDMPDKVPPELAPTSHRHPPPPPLASLTSLAPLSSYVKDQLKTSNC

Uniprot

H9IZJ3   A0A2H1WIM7   A0A2A4J4H4   A0A194PXU0   A0A212FK85   A0A194R2I2   + More
A0A0L7LTM0   A0A1E1WRV7   A0A0J7L0A3   A0A026WLQ6   A0A2A3EIH5   A0A088A1I3   K7J3I3   A0A0M8ZR21   A0A154PM96   E1ZX94   A0A2P8YAK3   A0A067RH42   A0A0L7QNS6   A0A1B6FZP5   A0A2J7R7Y0   A0A1B6K175   A0A195FU91   F4WBU3   A0A195DJ98   A0A151WN41   A0A1B6D1S3   A0A158NW88   A0A232FF77   A0A195C306   A0A182YPF0   A0A182LU83   A0A182QKF9   A0A182P9C1   E2B5Y3   A0A195BE82   B0WGX0   U5EK51   A0A1Q3F3M5   A0A182MXV9   A0A1Q3F3M8   A0A084WBD9   A0A087U1C6   Q7Q334   A0A182VBX4   A0A182XC96   A0A182HNJ7   W5JV52   A0A182LPI2   A0A182IKU1   A0A1S3D261   A0A2M4AS25   A0A182FPN4   A0A2M4CRM7   A0A2M3ZAM3   A0A2M4BNW5   A0A0P4W673   A0A146LNW6   A0A2H8TL22   J9JYF3   Q16XW4   A0A0A9VWG0   A0A0K8T2V7   A0A182R8P6   E0VQV3   T1J823   A0A0P4WA44   A0A0V0G6W1   A0A1Z5L739   A0A1B0EYZ7   A0A224XDS7   A0A069DU31   A0A293LGB8   R4G3W7   E9IG49   A0A2S2QW64   A0A2L2YF49   A0A0P4VMG9   V5HCM9   A0A1Y1MDS7   A0A293LZE2   A0A147BH26   A0A1Y1MD43   A0A147BR59   A0A131Y5H0   A0A1L8DLM7   A0A2R7WIG4   A0A182WF64   A0A164YHZ9   A0A0P5F342   A0A0P5DRH4   A0A0P5SIH9   A0A0P5N097   A0A0P4XQP9   A0A0N8D877   A0A0P5BPR3   N6TL02   A0A0P5EKH0   A0A0P6DI38   A0A0P6EIQ0  

Pubmed

19121390    26354079    22118469    26227816    24508170    30249741    + More
20075255    20798317    29403074    24845553    21719571    21347285    28648823    25244985    24438588    12364791    14747013    17210077    20920257    23761445    20966253    26823975    17510324    25401762    20566863    28528879    26334808    21282665    26561354    27129103    25765539    28004739    29652888    23537049   

EMBL

BABH01014311    BABH01014312    ODYU01008919    SOQ52918.1    NWSH01003271    PCG66636.1    + More
KQ459589    KPI97569.1    AGBW02008106    OWR54151.1    KQ460870    KPJ11729.1    JTDY01000106    KOB78828.1    GDQN01001342    JAT89712.1    LBMM01001608    KMQ96023.1    KK107154    QOIP01000001    EZA56888.1    RLU27535.1    KZ288241    PBC31274.1    KQ435971    KOX67779.1    KQ434978    KZC12979.1    GL435030    EFN74184.1    PYGN01000753    PSN41290.1    KK852685    KDR18487.1    KQ414851    KOC60219.1    GECZ01014110    JAS55659.1    NEVH01006723    PNF36933.1    GECU01002528    JAT05179.1    KQ981280    KYN43454.1    GL888066    EGI68371.1    KQ980824    KYN12569.1    KQ982911    KYQ49322.1    GEDC01024757    GEDC01017659    GEDC01014144    GEDC01014123    JAS12541.1    JAS19639.1    JAS23154.1    JAS23175.1    ADTU01027850    NNAY01000337    OXU29098.1    KQ978317    KYM95222.1    AXCM01000254    AXCN02002115    GL445887    EFN88952.1    KQ976511    KYM82519.1    DS231930    EDS27264.1    GANO01001946    JAB57925.1    GFDL01012894    JAV22151.1    GFDL01012885    JAV22160.1    ATLV01022345    ATLV01022346    KE525331    KFB47533.1    KK117699    KFM71165.1    AAAB01008966    EAA13006.3    APCN01001937    ADMH02000409    ETN66664.1    GGFK01010248    MBW43569.1    GGFL01003747    MBW67925.1    GGFM01004828    MBW25579.1    GGFJ01005553    MBW54694.1    GDRN01087132    GDRN01087128    JAI61074.1    GDHC01009028    JAQ09601.1    GFXV01002905    MBW14710.1    ABLF02036145    ABLF02036147    CH477530    EAT39480.1    GBHO01045066    JAF98537.1    GBRD01006095    JAG59726.1    DS235442    EEB15759.1    JH431945    GDRN01087133    JAI61070.1    GECL01002328    JAP03796.1    GFJQ02003754    JAW03216.1    AJVK01007412    GFTR01005829    JAW10597.1    GBGD01001687    JAC87202.1    GFWV01001100    MAA25830.1    GAHY01001306    JAA76204.1    GL762910    EFZ20455.1    GGMS01012700    MBY81903.1    IAAA01010462    IAAA01010463    LAA05845.1    GDKW01000255    JAI56340.1    GANP01011651    JAB72817.1    GEZM01034528    JAV83741.1    GFWV01008590    MAA33319.1    GEGO01005307    JAR90097.1    GEZM01034529    GEZM01034527    JAV83739.1    GEGO01002158    JAR93246.1    GEFM01001709    JAP74087.1    GFDF01006716    JAV07368.1    KK854794    PTY18800.1    LRGB01000915    KZS15274.1    GDIP01152023    JAJ71379.1    GDIP01152886    JAJ70516.1    GDIQ01092869    JAL58857.1    GDIQ01170997    JAK80728.1    GDIP01239472    JAI83929.1    GDIP01059231    JAM44484.1    GDIP01181612    JAJ41790.1    APGK01020350    KB740193    KB631669    ENN81104.1    ERL85218.1    GDIP01158524    JAJ64878.1    GDIQ01080227    JAN14510.1    GDIQ01075880    JAN18857.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000037510    + More
UP000036403    UP000053097    UP000279307    UP000242457    UP000005203    UP000002358    UP000053105    UP000076502    UP000000311    UP000245037    UP000027135    UP000053825    UP000235965    UP000078541    UP000007755    UP000078492    UP000075809    UP000005205    UP000215335    UP000078542    UP000076408    UP000075883    UP000075886    UP000075885    UP000008237    UP000078540    UP000002320    UP000075884    UP000030765    UP000054359    UP000007062    UP000075903    UP000075840    UP000000673    UP000075882    UP000075880    UP000079169    UP000069272    UP000007819    UP000008820    UP000075900    UP000009046    UP000092462    UP000075920    UP000076858    UP000019118    UP000030742   

PRIDE

H9IZJ3   

Pfam

PF00017   SH2        + More
PF00640   PID

Interpro

IPR011993   PH-like_dom_sf        + More
IPR006020   PTB/PI_dom       
IPR000980   SH2       
IPR006019   PID_Shc-like       
IPR029596   SHC4       
IPR036860   SH2_dom_sf       
IPR035676   SHC_SH2       
IPR029591   SHC2       
IPR029593   Shc3/ShcC/N-Shc       
IPR016024   ARM-type_fold       
IPR011989   ARM-like       
IPR013026   TPR-contain_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR019734   TPR_repeat       

SUPFAM

SSF55550   SSF55550        + More
SSF48371   SSF48371       
SSF48452   SSF48452       

Gene 3D

2.30.29.30     3.30.505.10     1.25.10.10     1.25.40.10    

CDD

cd01209  PTB_Shc
cd09925  SH2_SHC

ProteinModelPortal

H9IZJ3   A0A2H1WIM7   A0A2A4J4H4   A0A194PXU0   A0A212FK85   A0A194R2I2   + More
A0A0L7LTM0   A0A1E1WRV7   A0A0J7L0A3   A0A026WLQ6   A0A2A3EIH5   A0A088A1I3   K7J3I3   A0A0M8ZR21   A0A154PM96   E1ZX94   A0A2P8YAK3   A0A067RH42   A0A0L7QNS6   A0A1B6FZP5   A0A2J7R7Y0   A0A1B6K175   A0A195FU91   F4WBU3   A0A195DJ98   A0A151WN41   A0A1B6D1S3   A0A158NW88   A0A232FF77   A0A195C306   A0A182YPF0   A0A182LU83   A0A182QKF9   A0A182P9C1   E2B5Y3   A0A195BE82   B0WGX0   U5EK51   A0A1Q3F3M5   A0A182MXV9   A0A1Q3F3M8   A0A084WBD9   A0A087U1C6   Q7Q334   A0A182VBX4   A0A182XC96   A0A182HNJ7   W5JV52   A0A182LPI2   A0A182IKU1   A0A1S3D261   A0A2M4AS25   A0A182FPN4   A0A2M4CRM7   A0A2M3ZAM3   A0A2M4BNW5   A0A0P4W673   A0A146LNW6   A0A2H8TL22   J9JYF3   Q16XW4   A0A0A9VWG0   A0A0K8T2V7   A0A182R8P6   E0VQV3   T1J823   A0A0P4WA44   A0A0V0G6W1   A0A1Z5L739   A0A1B0EYZ7   A0A224XDS7   A0A069DU31   A0A293LGB8   R4G3W7   E9IG49   A0A2S2QW64   A0A2L2YF49   A0A0P4VMG9   V5HCM9   A0A1Y1MDS7   A0A293LZE2   A0A147BH26   A0A1Y1MD43   A0A147BR59   A0A131Y5H0   A0A1L8DLM7   A0A2R7WIG4   A0A182WF64   A0A164YHZ9   A0A0P5F342   A0A0P5DRH4   A0A0P5SIH9   A0A0P5N097   A0A0P4XQP9   A0A0N8D877   A0A0P5BPR3   N6TL02   A0A0P5EKH0   A0A0P6DI38   A0A0P6EIQ0  

PDB

2L1C     E-value=4.11773e-46,     Score=463

KEGG

101739196    K06279 SHC-transforming protein 1 | (RefSeq) SHC-transforming protein 1

PATHWAY

04013    MAPK signaling pathway - fly - Bombyx mori (domestic silkworm)

GO

GO:0035556   GO:0005886   GO:0030971   GO:0005515   GO:0016791   GO:0006470   GO:0008138   GO:0004725   GO:0006172   GO:0006631   GO:0006635   GO:0006281   GO:0048384  

PANTHER

PTHR10337:SF12   PTHR10337:SF5   PTHR10337:SF4  

Length:

258

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.085

Exp number, first 60 AAs:

0.05019

Total prob of N-in:

0.02850

outside

1  -  258

 

 

Pi

244.603197

Theta

197.322949

Tajima's D

0.71573

CLR

0

CSRT

0.580270986450677

Interpretation

Uncertain