Gene

KWMTBOMO02568

Pre Gene Modal

BGIBMGA002678

Annotation

PREDICTED:_SHC-transforming_protein_1_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr5(-):5654151-5657306      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.126 Nuclear   Reliability : 1.331

CDS

ATGGACTGTGTGTCGTGCCATATTAAAATTAACAATACAAAGTGCGAGGAAAGCGTAAGGCACTACGTGAACCAGACCCCCCCGCCGCGGACCCCGCCCACCGCGCTGCTGCCGAACCACCACACGGACATTTTTGACATGCAGCCATTCACGGCGGCCCCGGTCACGTCGTCGTCGTCCTCTGTGACCTCGGGCACGTCCGCGTCCGCCGAATGCGCGCCGCTCACTGCCGAGGCGCAGGCCGCGCTGCTGGCTAAGGAGCCCTGGTTCCACGGACCTATTTCTAGGACTACTGCTGAAAAGTTGGTAGTTGAGGATGGCGAGTTTTTGGTGCGCGAGTCGACGGCGTGCGCGGGCCAGTTCGTACTGACGGGCGCCAGGAGGGGCCTGCACAAACATCTACTACTCGTCGATCCTATAGGGGTGGTACGAACTAAAGATCGGGTGTTCGACAGTGTACCCCATCTAATCAAGTACCACTGTTCTAACGAGCTGCCCATAGTCTCAGCGGATTCCGCTCTACTACTCCGTAAGCCGGTCCTCAGGTCGTCTTCCTGA

Protein

MDCVSCHIKINNTKCEESVRHYVNQTPPPRTPPTALLPNHHTDIFDMQPFTAAPVTSSSSSVTSGTSASAECAPLTAEAQAALLAKEPWFHGPISRTTAEKLVVEDGEFLVRESTACAGQFVLTGARRGLHKHLLLVDPIGVVRTKDRVFDSVPHLIKYHCSNELPIVSADSALLLRKPVLRSSS

Uniprot

H9IZJ3   A0A212FK85   A0A2A4J4H4   A0A194PXU0   A0A194R2I2   A0A2J7R7Y0   + More
A0A1B6K175   A0A067RH42   A0A232FF77   K7J3I3   A0A0C9QLC2   A0A1B6D1S3   A0A182GTT2   A0A1B0EYZ7   E1ZX94   A0A1W4XAS6   A0A1B0CEK1   A0A0M8ZR21   Q16XW4   A0A182WF64   A0A1L8DLM7   A0A1W4XKZ5   A0A182LU83   T1J823   A0A154PM96   A0A0L7QNS6   A0A1Y1MD43   A0A182YPF0   A0A182THQ4   E9IG49   A0A182XC96   A0A182HNJ7   A0A182VBX4   A0A182LPI2   F4WBU3   A0A1Q3F3M8   A0A182QKF9   A0A182MXV9   A0A034WHH7   A0A158NW88   U5EK51   A0A151WN41   A0A084WBD9   A0A195DJ98   B0WGX0   A0A1Q3F3M5   A0A182FPN4   A0A088A1I3   A0A2A3EIH5   A0A182R8P6   A0A182IKU1   A0A0K8V3X7   A0A2M4CRM7   A0A2M3ZAM3   A0A2M4BNW5   A0A026WLQ6   A0A2M4AS25   A0A195FU91   A0A2P2IBB6   F6RER1   A0A1W2WL30   A0A0K8T2V7   A0A0A9VWG0   A0A146LNW6   A0A1D2MSC5   E2B5Y3   A0A2R8QEV1   E7F3T0   E9QCZ8   A0A2G8LMA0   A0A3B4DR52   A0A3B4C1L1   A0A1S3D261   A0A3B4DSH0   A0A336L6Z9   W5LAG0   W8B356  

Pubmed

19121390    22118469    26354079    24845553    28648823    20075255    + More
26483478    20798317    17510324    28004739    25244985    21282665    20966253    21719571    25348373    21347285    24438588    24508170    30249741    12481130    15114417    25401762    26823975    27289101    23594743    29023486    25329095    24495485   

EMBL

BABH01014311    BABH01014312    AGBW02008106    OWR54151.1    NWSH01003271    PCG66636.1    + More
KQ459589    KPI97569.1    KQ460870    KPJ11729.1    NEVH01006723    PNF36933.1    GECU01002528    JAT05179.1    KK852685    KDR18487.1    NNAY01000337    OXU29098.1    GBYB01001412    JAG71179.1    GEDC01024757    GEDC01017659    GEDC01014144    GEDC01014123    JAS12541.1    JAS19639.1    JAS23154.1    JAS23175.1    JXUM01087788    KQ563658    KXJ73540.1    AJVK01007412    GL435030    EFN74184.1    AJWK01008943    KQ435971    KOX67779.1    CH477530    EAT39480.1    GFDF01006716    JAV07368.1    AXCM01000254    JH431945    KQ434978    KZC12979.1    KQ414851    KOC60219.1    GEZM01034529    GEZM01034527    JAV83739.1    GL762910    EFZ20455.1    APCN01001937    GL888066    EGI68371.1    GFDL01012885    JAV22160.1    AXCN02002115    GAKP01005181    GAKP01005180    JAC53772.1    ADTU01027850    GANO01001946    JAB57925.1    KQ982911    KYQ49322.1    ATLV01022345    ATLV01022346    KE525331    KFB47533.1    KQ980824    KYN12569.1    DS231930    EDS27264.1    GFDL01012894    JAV22151.1    KZ288241    PBC31274.1    GDHF01018801    JAI33513.1    GGFL01003747    MBW67925.1    GGFM01004828    MBW25579.1    GGFJ01005553    MBW54694.1    KK107154    QOIP01000001    EZA56888.1    RLU27535.1    GGFK01010248    MBW43569.1    KQ981280    KYN43454.1    IACF01005726    LAB71309.1    EAAA01000610    GBRD01006095    JAG59726.1    GBHO01045066    JAF98537.1    GDHC01009028    JAQ09601.1    LJIJ01000643    ODM95625.1    GL445887    EFN88952.1    CR854942    MRZV01000033    PIK61387.1    UFQS01001980    UFQS01002157    UFQT01001980    UFQT01002157    SSX12846.1    SSX13370.1    SSX32288.1    GAMC01011005    JAB95550.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000235965    + More
UP000027135    UP000215335    UP000002358    UP000069940    UP000249989    UP000092462    UP000000311    UP000192223    UP000092461    UP000053105    UP000008820    UP000075920    UP000075883    UP000076502    UP000053825    UP000076408    UP000075902    UP000075840    UP000075903    UP000075882    UP000007755    UP000075886    UP000075884    UP000005205    UP000075809    UP000030765    UP000078492    UP000002320    UP000069272    UP000005203    UP000242457    UP000075900    UP000075880    UP000053097    UP000279307    UP000078541    UP000008144    UP000094527    UP000008237    UP000000437    UP000230750    UP000261440    UP000079169    UP000018467   

PRIDE

H9IZJ3   

Pfam

PF00017   SH2        + More
PF00640   PID

Interpro

IPR011993   PH-like_dom_sf        + More
IPR006020   PTB/PI_dom       
IPR000980   SH2       
IPR006019   PID_Shc-like       
IPR029596   SHC4       
IPR036860   SH2_dom_sf       
IPR035676   SHC_SH2       
IPR029591   SHC2       
IPR029593   Shc3/ShcC/N-Shc       
IPR013026   TPR-contain_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR019734   TPR_repeat       
IPR029586   Shc1/ShcA       

SUPFAM

SSF55550   SSF55550        + More
SSF48452   SSF48452       

Gene 3D

2.30.29.30     3.30.505.10     1.25.40.10    

CDD

cd01209  PTB_Shc
cd09925  SH2_SHC

ProteinModelPortal

H9IZJ3   A0A212FK85   A0A2A4J4H4   A0A194PXU0   A0A194R2I2   A0A2J7R7Y0   + More
A0A1B6K175   A0A067RH42   A0A232FF77   K7J3I3   A0A0C9QLC2   A0A1B6D1S3   A0A182GTT2   A0A1B0EYZ7   E1ZX94   A0A1W4XAS6   A0A1B0CEK1   A0A0M8ZR21   Q16XW4   A0A182WF64   A0A1L8DLM7   A0A1W4XKZ5   A0A182LU83   T1J823   A0A154PM96   A0A0L7QNS6   A0A1Y1MD43   A0A182YPF0   A0A182THQ4   E9IG49   A0A182XC96   A0A182HNJ7   A0A182VBX4   A0A182LPI2   F4WBU3   A0A1Q3F3M8   A0A182QKF9   A0A182MXV9   A0A034WHH7   A0A158NW88   U5EK51   A0A151WN41   A0A084WBD9   A0A195DJ98   B0WGX0   A0A1Q3F3M5   A0A182FPN4   A0A088A1I3   A0A2A3EIH5   A0A182R8P6   A0A182IKU1   A0A0K8V3X7   A0A2M4CRM7   A0A2M3ZAM3   A0A2M4BNW5   A0A026WLQ6   A0A2M4AS25   A0A195FU91   A0A2P2IBB6   F6RER1   A0A1W2WL30   A0A0K8T2V7   A0A0A9VWG0   A0A146LNW6   A0A1D2MSC5   E2B5Y3   A0A2R8QEV1   E7F3T0   E9QCZ8   A0A2G8LMA0   A0A3B4DR52   A0A3B4C1L1   A0A1S3D261   A0A3B4DSH0   A0A336L6Z9   W5LAG0   W8B356  

PDB

1MIL     E-value=2.61031e-28,     Score=308

KEGG

101739196    K06279 SHC-transforming protein 1 | (RefSeq) SHC-transforming protein 1

GO

GO:0035556   GO:0007165   GO:0001525   GO:0030971   GO:0000187   GO:0005886   GO:0008284   GO:0048863  

PANTHER

PTHR10337:SF12   PTHR10337:SF5   PTHR10337:SF4   PTHR10337:SF2  

Length:

185

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000950000000000001

Exp number, first 60 AAs:

0.00011

Total prob of N-in:

0.21099

outside

1  -  185

 

 

Pi

215.546808

Theta

175.088071

Tajima's D

0.990547

CLR

0.366658

CSRT

0.654617269136543

Interpretation

Uncertain