SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02563
Pre Gene Modal
BGIBMGA002680
Annotation
PREDICTED:_microspherule_protein_1_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.728
 

Sequence

CDS
ATGGAGTTTCCCACCTTACCCTTTAATGCGTCAGATTCAAATGACTATCCAGGATCTGCTCAAATCCCACTGTCAAGCTCAAAAGACGACAGTAAACGGCGCAGTTCATCAAGATCCATCAAGAGACGTCGTTTTGATGATGAACTAGTTGAATATAGCTTAGGATTGCCGGGTGCTTCAGTTGGTAAAGGTGACAAAAGAATGCGCACACAATCTTATACCAGTAGTAGTCTACCAGATTTACCAATCCCTGCTAATGTACCGGTTATATCTAATAATACTACACATGAGCGCCGACGTCACTCTAGCAAAGTTTCTGGAATCATGAGCGGCGGGAAGAAGGCCCGTCGTAAAGGGCACCTCAGTCAATTGTCAACTAAAGATTTAGGTCGCTGGAAGCCTACTGATGACCTTGCTTTAATTCTAGGAGTTCAACAGACAAATGACCTCCGTATAGTACATCGAGGTATCAAATTCTCATGCCGATTCACAGTAAGTGAACTACAATCCCGATGGTATGCTTTACTCTATAATGCGGAAATATCACGAGTGGCAGTGGCTGCTATGAGAAATCTTCATCCAGACTTAGTTGCTGCAGTTCAACAGCAAGCTTTGTATTCGACAAGCGAGGAGGAGTTGCTTGGAACATTGAGTAGTACTTCACATCCAACTTTGGAGAAATTTCAAGAGTTACTTGATCAGAACCCTCATGTATTCTACCCGACGAGAACATCTAAGACGTTGATGGCACACTGGCAGCTTTTAAAACAATATCAGCTCTTGCCAGATCAAACTGTGCTACCTTTACCAAAAAATCAGAATGACAAAGTGTTGACATTCTCTGATGCTGAGGAGACAATGAATGATAATGAACTTCCTGACTACAAGGAAGATGGAGTAGACCTAGAAATGCAAATGGCTGACAGAATTGAGAAGAAAAATATACGTCTACTGGAAAATTCATTGTCTCGGTGGCAAGTGTTGGTACAGTCGGTGGCTGGTGGTAATGTTGAACTTGACAAGAACACACTGGCAGTTCTCCGTGGTCGTCTAGTTCGATATTTAATGAGGTCCAGAGAGATTGCCGTTGGCCGTAGCACACGAGATCACCCCATTGACGTCGACTTAAGTTTGGAAGGTCCCGCCGCGAAGGTATCTAGAAAACAAGCAACAATCCGTCTCCGTAACAGTGGTGAATTCTTCATGTCCTCTGAAGGAAAACGCCCTATATTTGTTGACGGACGTCCCGTTTTGCAGGGAAATAAAGTCAAGCTGAATCACAATAGTGTAATTGAGATCGCGGCACTACGCTTCGTTTTTCTCGTCAACCAAGATCTCATCAGTGCAATACGTCAAGAAGCCGTTAAAGTTACTATACCTGTATGA
Protein
MEFPTLPFNASDSNDYPGSAQIPLSSSKDDSKRRSSSRSIKRRRFDDELVEYSLGLPGASVGKGDKRMRTQSYTSSSLPDLPIPANVPVISNNTTHERRRHSSKVSGIMSGGKKARRKGHLSQLSTKDLGRWKPTDDLALILGVQQTNDLRIVHRGIKFSCRFTVSELQSRWYALLYNAEISRVAVAAMRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTLMAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNELPDYKEDGVDLEMQMADRIEKKNIRLLENSLSRWQVLVQSVAGGNVELDKNTLAVLRGRLVRYLMRSREIAVGRSTRDHPIDVDLSLEGPAAKVSRKQATIRLRNSGEFFMSSEGKRPIFVDGRPVLQGNKVKLNHNSVIEIAALRFVFLVNQDLISAIRQEAVKVTIPV

Summary

EMBL
AGBW02008106    OWR54158.1    KQ459589    KPI97575.1    GAIX01003544    JAA89016.1    + More
GDQN01006307    JAT84747.1    NWSH01000735    PCG74509.1    BABH01014313    BABH01014314    BABH01014315    ODYU01012565    SOQ58969.1    KK107804    QOIP01000013    EZA47568.1    RLU15514.1    GL762137    EFZ21961.1    KQ434924    KZC11633.1    GL446664    EFN87449.1    NNAY01000789    OXU26504.1    KQ978881    KYN27735.1    GL887908    EGI69524.1    ADTU01018784    KQ981693    KYN37715.1    GL436457    EFN71912.1    KQ982762    KYQ51033.1    KQ977294    KYN03912.1    KZ288349    PBC27444.1    LBMM01001298    KMQ96554.1    GBYB01004919    JAG74686.1    KQ435916    KOX68759.1    NEVH01013256    PNF29236.1    PNF29237.1    GEBQ01027310    JAT12667.1    GECU01010848    JAS96858.1    GFDF01008503    JAV05581.1    DS235014    EEB10473.1    GEZM01051279    GEZM01051277    JAV75060.1    LJIG01015963    KRT82025.1    GANO01000149    JAB59722.1    GEDC01022226    GEDC01020666    GEDC01007452    JAS15072.1    JAS16632.1    JAS29846.1    KQ971323    EFA00828.1    GBXI01016190    JAC98101.1    GFDL01010782    JAV24263.1    DS231885    EDS43203.1    JRES01001151    KNC25135.1    GAKP01013352    JAC45600.1    GDHF01016021    JAI36293.1    JXUM01137135    KQ568531    KXJ68971.1    GAMC01004405    JAC02151.1    CH477196    EAT48369.1    EZ422931    ADD19207.1    APCN01004270    JXJN01010887    JW870356    AFP02874.1    CH940647    EDW70114.2    AAAB01008960    EAA11833.4    AXCM01000865    AXCN02000985    CH916366    EDV97684.1    KQ976692    KYM77799.1    CP012525    ALC43034.1    GGFK01010722    MBW44043.1    GGFK01010577    MBW43898.1    CH933809    EDW19621.2    CH902618    EDV39568.1    AJVK01009991    AJVK01009992    AE014296    AY060599    AAF47828.1    AAL28147.1    CM000363    EDX09149.1    ADMH02000542    ETN65993.1    APGK01034496    KB740914    KB632005    ENN78343.1    ERL87926.1    KA645874    AFP60503.1    CM002912    KMY97475.1    GGFJ01004476    MBW53617.1    GGFJ01004478    MBW53619.1    GGFJ01004477    MBW53618.1    GGFJ01004475    MBW53616.1    CM000159    EDW93340.1    CH964154    EDW79895.1    CH480817    EDW50406.1    UFQS01000031    UFQT01000031    SSW97873.1    SSX18259.1    BC091366    AAH91366.1   
Pfam
PF00498   FHA        + More
PF13325   MCRS_N
Interpro
IPR037912   MCRS1        + More
IPR008984   SMAD_FHA_dom_sf       
IPR000253   FHA_dom       
IPR025999   MCRS_N       
SUPFAM
SSF49879   SSF49879       

Ontologies

Topology

Length:
461
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00557
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00045
outside
1  -  461
 
 

Population Genetic Test Statistics

Pi
221.219025
Theta
170.685827
Tajima's D
0.844186
CLR
0.051501
CSRT
0.615419229038548
Interpretation
Uncertain
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