SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02560  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002682
Annotation
PREDICTED:_uncharacterized_protein_LOC101739478_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.675 Nuclear   Reliability : 1.162
 

Sequence

CDS
ATGCAAAGAATAGATATGGATATTATCGATGTGTTGCTTCAAGCTGGGTTGATTACTTCAGCCTTGGTTTTGTATTTGTTATTCATACGTAAACAACCGGCACGTAGAGGAGAATATAAATTGCCAGGCTGGAACTACCCCTTGAAGCTTTTGCTAGCTAGATATGCTGTGAAGCGATGGAAAGCTGGTTTACACTCAATAGTCGGAGATGAGTCACCACGTGGTCCACAACACGAAGGCTGGGACTCCATTTCCATTCGCACTGCAGCGCCTAATGGAGTCACGGTGCTTTTGGGAGTTCGGAAATTATGTGGGCGCCAACCCATGGCTGAAATAATTGTGTATATAAAATTAAAAGACGGCACATCTTACGAACTGATGGATTGTCCCGACACACTGGTTGGAGCATGGCTATCAACAGCAGATGGATGGCGTGCTGGCGGACTGAAGATACAAATTTTAGAGCCCCGTTGTCGAATGAGAATTTTATACAACGGTCTTTTAAAAAGAACAACAGACAATGTTACTCAACATGTAACGTTTAATTTAACGTGGACCTCGAGTTCTGTTCCCGTAGAGCATCCCAAAGACTGGAACGAGAAATTAGCGGCACAAACTTTGGCTTTGGAACCATGGCGAGATAGTCAATGGTCGTCGATGCTAGGTAAATGGGAAGAAGGAAGTTGGCTTCAGTGGGGAACCGTGCAAGGACGATTCCAGTCGTTTACTGCGGAAGGCGCTCTTGACACGACTGAATACCTGCAAACTCGAGGAGTGAAAGAGAGGCATTGGGCGCCGCACGCATATGAGGGTACACGGAGATCTTTTTCTATAACGGCATCAGCAAGAGATGGTACCGCTGTCGTGCTACGAGGAGTGTCATACAAAAAGGTTTTGACTCAGTGCTTGTCAGGTTGTGTCAGACTCCCTGATTACAGAGTACTGACTATTACGGATACTGATTTGATCATGTCCGATTTTTGCGAAACTCCTGGTGGAATACCAAGTGCTTACACCATAAACATACACACGAAGGAACGTTCTCTCAAAGTTGTACTCCGCATCGGTGAGGAGGGATGTACGGCTTATAGTGGAGTTCCGTACCAACAGGAACTGGTGTACCGCGCTATTGTCGCTGATATCGACGGGGAAGCGGGCTCTGGTATCTTGGAGCTTGGATATCTGCCTAAAGCCATTGCTCAGCCATCAGTCCGTCTCACTCCAGCGCCCATTTTGAAATGGTTGTTAAAAAAAGATGCTGGTTTCGTTGGCTATTGTTTGTCGTTCGAAGAACGTGCTGCAACGTGTACTGATTACGTCGGCGGGAAAGGAGCATCCTTGGCATTACTAGCCTCCGTACAGAATGATGAGGGATACCGGGTGCCACCGGGTTTTTGTATAACAACTAAAGCACTGGAGAAACATCTTCAATTGCATACTGAACTGAAAGCAGCTATACAAGATATAGAGGCAGCTAATGAAAATTATGAGGAGGCTTACTTCAAAGAACGATGTCAGAAAGTTTCATCATTATTCTTGGCTTTAGAATTAAGCGCAGATATAAAGAAAGACATATTAGAATATATGCAGGAGTTGAGGAGCAAATCCGCACAGTTGAAAGACGCACAGGAGTTGCGATTTGCCGTTCGATCTTCAGCGGTCGGAGAAGACAGCGAGGCGTTATCTGCTGCTGGACAGAACGAAACAATTTTGGGTTGTGTCACCGACGATGACGTGATACGAGCGGTCCAGAAGTGCTGGGGCTCCATGTTTGAGTTCACAAGTACCTATTATCGCAGACAGAACGGCCAAGTATGTTTATGCGGAGGCGGGGTCGTGGTGCAGACGCTGGTGTCGCCTCGCGTCGCCGGCGTCATGTTCACTCGACACCCTGACGCTGGAGATCCTTCGAGGCTACTCATCACCGCAAATTATGGATTGGGAGAAAGCGTCGTCTCCGGTACCGTAGAGCCCGACACGATAATCGTGAAGCGAGAACCAAACGGCGTCCTCACTATCCAGAAAAGGGAACTAGGATCTAAAACGCGACGCCACGTCGCGTCATCTAGCGGCGGAGTCATTACAGAAGACGTTCCGGAAAAAGAAAGAAGTGTTGCATGTTTGAATGACACCGAAGTACTTAAGCTAGCTCGACTAGGTGTTGTACAAGAGGAACTTTGGGGGGCCGGGAGGGATATAGAGTGGGCTATAAGTGGCGATCAAGTGTATTTATTGCAAGCGCGGCCGATTACGTCTTTAGAACGATGGACTGAAGAAGAGCTACTACACGAAGTCGACTCTCCGATTATGGCAGATAACGAACTGACCACATTCGGCAACACTGGAGAGGTTCTTCCGAAGCCTGTAACTCCGCTAACCTACGATTTGGTGATACGTCCGCTGATATGGAGCATGGACCGAGCCATAATCACAAACGGCAGCCAGTACGACCACAGTCTAACGCTCAGCCACTACAGATGCGCTATATCTTTGTATAATTCGGTTTATCGAAGAGTACCAAAAAAGCTAGACACTAACATACGAATGATGGAAATGGCCATAAACGGACACAAAATAGCGGACGAAAACATTCACAAGACCGCGCTGATTCGCAGAAAACCGCACTGGACTGATCGAATAAGGCTTATTCATCATATGATTATGTCTATATTGACTTCGAAATGGAAACTAAACGATACAGTTAAGAAAGCGAAAGATCTAGAAGTTGGAACGAACGCCAAAGAACCAATCGAATTACTGGAAAGTATTGCTGAATGTGAAGATTTGATTGGCGAGCTGACGTACAACCACAGCGTGACCACCGTGGCCAGCACGTCCAGTCAGATTATAGCTATGACCATACTCATGGAAGGGAGTGCAGACTTCACTCCAGAACAATGTAATGAGATCAGCAAATTGCTAAGCTCCGGAGATGTGTTATCAGCAGAGGTTCCACAGTGTTTGGCAAACTTAACTAGGCAATTAGAAAAATCCCGGCTGATGGACGAATTTCGTGCCCAAGACCCGAAGTACGCATTGAGATGGTTGAAAAGGAATCTCCCTCATATTTACCTAGACATTTGCACATTCCTCGAGCACCACGGATACAGGGCTATCATGGAGTTTGATTTATACACGAAGCCATGGATATTGGTCCCGGAAGAAATGATGAAAATACTACAAAACCTACGTTCTTCGCCGGAGGAACCACAACAATCTAAGACAACAGACGAAGTCATCGCTTCCTTGACCACCCCTAAGAAGAACAGCACCAGGAAAGTCCTACGATGGGTGTTGCCTCTCTGCAGGAGAGCGGTCCGCCACCGCGAGGGCACGAAAGCGCACCTCATTCTGGCTGCACATAAAATGCGATTGGCGTTATTACGGCTCGGCGACATGTTGGTACGCCAATGGTATCTGCCGCATCCAGACTTGGTATTTTTCTTCAGGCTGGGCGAACTCCAAGAGTACGTTAGGAAAAGAGATCCGGTGTTGTTAAAGAAGGCAATCCAGCGCCAGCAGTATTACCCGAAATGGTGCAAGTTGAAATTCAACGAACTGAATAATGGATGGATAGCGCCTCTAGAAGCAAAAGGTCCTTCGGTCAGGGCCGGTGACGTCAGAATCGAAGCGACCTCCGTCTGCGGCGGAGAGGTAGTGGCCAGGGCCTGTGTCGTCAAAGAACTTTCTGAAGTAAGAATCATCTGCTAA
Protein
MQRIDMDIIDVLLQAGLITSALVLYLLFIRKQPARRGEYKLPGWNYPLKLLLARYAVKRWKAGLHSIVGDESPRGPQHEGWDSISIRTAAPNGVTVLLGVRKLCGRQPMAEIIVYIKLKDGTSYELMDCPDTLVGAWLSTADGWRAGGLKIQILEPRCRMRILYNGLLKRTTDNVTQHVTFNLTWTSSSVPVEHPKDWNEKLAAQTLALEPWRDSQWSSMLGKWEEGSWLQWGTVQGRFQSFTAEGALDTTEYLQTRGVKERHWAPHAYEGTRRSFSITASARDGTAVVLRGVSYKKVLTQCLSGCVRLPDYRVLTITDTDLIMSDFCETPGGIPSAYTINIHTKERSLKVVLRIGEEGCTAYSGVPYQQELVYRAIVADIDGEAGSGILELGYLPKAIAQPSVRLTPAPILKWLLKKDAGFVGYCLSFEERAATCTDYVGGKGASLALLASVQNDEGYRVPPGFCITTKALEKHLQLHTELKAAIQDIEAANENYEEAYFKERCQKVSSLFLALELSADIKKDILEYMQELRSKSAQLKDAQELRFAVRSSAVGEDSEALSAAGQNETILGCVTDDDVIRAVQKCWGSMFEFTSTYYRRQNGQVCLCGGGVVVQTLVSPRVAGVMFTRHPDAGDPSRLLITANYGLGESVVSGTVEPDTIIVKREPNGVLTIQKRELGSKTRRHVASSSGGVITEDVPEKERSVACLNDTEVLKLARLGVVQEELWGAGRDIEWAISGDQVYLLQARPITSLERWTEEELLHEVDSPIMADNELTTFGNTGEVLPKPVTPLTYDLVIRPLIWSMDRAIITNGSQYDHSLTLSHYRCAISLYNSVYRRVPKKLDTNIRMMEMAINGHKIADENIHKTALIRRKPHWTDRIRLIHHMIMSILTSKWKLNDTVKKAKDLEVGTNAKEPIELLESIAECEDLIGELTYNHSVTTVASTSSQIIAMTILMEGSADFTPEQCNEISKLLSSGDVLSAEVPQCLANLTRQLEKSRLMDEFRAQDPKYALRWLKRNLPHIYLDICTFLEHHGYRAIMEFDLYTKPWILVPEEMMKILQNLRSSPEEPQQSKTTDEVIASLTTPKKNSTRKVLRWVLPLCRRAVRHREGTKAHLILAAHKMRLALLRLGDMLVRQWYLPHPDLVFFFRLGELQEYVRKRDPVLLKKAIQRQQYYPKWCKLKFNELNNGWIAPLEAKGPSVRAGDVRIEATSVCGGEVVARACVVKELSEVRIIC

Summary

EMBL
NWSH01000735    PCG74506.1    ODYU01011946    SOQ57983.1    KQ461103    KPJ09368.1    + More
KQ459589    KPI97579.1    QOIP01000006    RLU21133.1    KK107020    EZA62576.1    KQ977106    KYN05755.1    ADTU01027574    KQ982790    KYQ50675.1    NEVH01016973    PNF24782.1    PNF24781.1    KQ976730    KYM76400.1    KQ981993    KYN31125.1    AAZX01003980    KQ435821    KOX72398.1    GL451420    EFN79325.1    KQ769068    OAD52987.1    KQ971344    KYB27089.1    KQ414727    KOC62505.1    GDIP01083235    JAM20480.1    PNF24779.1    GDIQ01230930    JAK20795.1    GDIP01083234    JAM20481.1    GDIP01060631    JAM43084.1    GDIP01192963    JAJ30439.1    GDIQ01106169    JAL45557.1    GDIP01198071    JAJ25331.1    GDIP01207108    JAJ16294.1    GDIQ01072335    JAN22402.1    GDIQ01213933    JAK37792.1    GDIQ01072334    JAN22403.1    GDIQ01199533    JAK52192.1    KQ434819    KZC06953.1    GDIQ01213934    JAK37791.1    GDIQ01128517    JAL23209.1    GDIQ01180349    GDIQ01113569    GDIQ01047395    GDIQ01047394    JAN47342.1    GDIQ01180348    JAK71377.1    GL732539    EFX82660.1    GDIQ01110471    JAL41255.1    GDIQ01106170    JAL45556.1    GDIQ01234130    JAK17595.1    GDIQ01198193    GDIQ01159505    GDIQ01157603    GDIQ01152555    GDIQ01141209    GDIQ01139009    GDIQ01136517    GDIQ01126621    GDIQ01112169    GDIQ01110470    GDIQ01106171    GDIQ01094923    GDIQ01045549    GDIQ01043393    JAK94122.1    GDIQ01126620    JAL25106.1    GDIQ01193089    JAK58636.1    GDIQ01194890    GDIQ01141210    GDIQ01124918    GDIQ01096777    GDIQ01094924    GDIQ01043394    JAN51343.1    KK853332    KDR08398.1    GDIQ01196634    JAK55091.1    GDIQ01175545    JAK76180.1    GDIQ01096776    JAL54950.1    GDIQ01196633    JAK55092.1    GDIP01109732    GDIP01109731    GDIP01094486    JAL93982.1    GDIQ01201942    GDIQ01130725    JAK49783.1    GDIQ01199532    JAK52193.1    GDIQ01081577    JAN13160.1    GDIQ01184040    GDIQ01184038    JAK67687.1    GDIP01210009    JAJ13393.1    GDIQ01201944    GDIQ01142905    GDIQ01130726    JAL21000.1    GDIP01138374    JAL65340.1    GDIQ01086478    JAN08259.1    GDIQ01218041    GDIQ01216926    GDIQ01159506    GDIQ01157604    GDIQ01112170    GDIQ01083431    JAK94121.1    GDIQ01068443    JAN26294.1    GDIQ01177390    JAK74335.1    GDIQ01201945    GDIQ01185844    GDIQ01130723    GDIQ01129823    GDIQ01086479    GDIQ01068444    JAL21003.1    GDIQ01187394    JAK64331.1    GDIQ01187393    GDIQ01086475    JAN08262.1    GDIQ01184039    JAK67686.1    GDIQ01177391    GDIQ01168549    GDIQ01032453    JAK83176.1    GDIQ01161050    JAK90675.1    GDIQ01177392    JAK74333.1    GDIQ01193088    JAK58637.1    GDIQ01136518    JAL15208.1    GDIQ01142906    JAL08820.1    GDIQ01201943    GDIQ01101079    GDIQ01086476    JAN08261.1    GDIQ01086477    JAN08260.1    GDIQ01130722    JAL21004.1    GDIP01092977    JAM10738.1    GDIP01092978    JAM10737.1    GDIP01217663    GDIP01215318    GDIP01198911    GDIP01198070    JAJ05739.1    GDIQ01130724    JAL21002.1    GDIP01130121    JAL73593.1    GDIP01207167    JAJ16235.1    GDIQ01239387    GDIQ01239386    JAK12338.1    PNF24783.1    GDIQ01239385    JAK12340.1    GDIP01045198    JAM58517.1    GDIQ01072333    JAN22404.1    GDIQ01198194    JAK53531.1    GDIP01186966    GDIP01186965    JAJ36436.1    GDIP01078776    JAM24939.1    GDIP01185823    JAJ37579.1    GDIP01093025    JAM10690.1    GDIP01207166    JAJ16236.1    PNF24778.1    GDIQ01120212    JAL31514.1    GDIP01081277    JAM22438.1    GDIP01154569    JAJ68833.1    GDIQ01131973    JAL19753.1    GDIQ01165208    JAK86517.1   
Pfam
PF01326   PPDK_N        + More
PF00391   PEP-utilizers
PF08368   FAST_2
PF05602   CLPTM1
Interpro
IPR008279   PEP-util_enz_mobile_dom        + More
IPR036637   Phosphohistidine_dom_sf       
IPR002192   PPDK_PEP-bd       
IPR013815   ATP_grasp_subdomain_1       
IPR013579   FAST_2       
IPR008429   CLPTM1       
SUPFAM
SSF52009   SSF52009       
Gene 3D
PDB
5HV3     E-value=1.52775e-35,     Score=379

Ontologies

Topology

Length:
1236
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.4226199999999
Exp number, first 60 AAs:
19.38928
Total prob of N-in:
0.96602
POSSIBLE N-term signal
sequence
inside
1  -  11
TMhelix
12  -  29
outside
30  -  1236
 
 

Population Genetic Test Statistics

Pi
41.001605
Theta
20.225573
Tajima's D
-1.073885
CLR
304.105919
CSRT
0.122993850307485
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 AAIQDIEAANENYEEAYFK 95.24 7e-09
26822097 SVACINDTEVIK 100.00 6e-06
28556443 LGVVQEELWGAGR 100.00 9e-05
28556443 TTDEVIASLTTPK 100.00 0.028
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