SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02557
Pre Gene Modal
BGIBMGA002607
Annotation
hypothetical_protein_KGM_12768_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.687
 

Sequence

CDS
ATGAACGATGCCTCCAAACATCTAGCAAAGATTGGAGCAGAGAAAGGAAGGGCCTTGGATTATCTCGTGGGGCTTATGAAAGAACGGGGAGAAAGCCCTTTGGGACAGATGCAGGGATATCTCCAGACTTATTCCGATGGAGCTAAAAGGATAGAAAATGCGCCAAGTCTTACAAACGAAAAAGTTGACAAAGGGACCTATGAATCTGTTCGAGGAAAATTAACGCAGCTTGTCACAGAAAAGCCTTCAGAAGAACACAAGAAGCATATTACAGGTCTTGTAGATGATTCCTCAAAGTTCCTCGCTGCGCCGTTGCCTGAAACGGAATCTGAGAAACGACGGGTATTGGCAGATTTAATGGCACGAAAAGGTGATCAGATGCTTGCGCAGGATGGTCTATACAAAATAACATACACAGAAGGAGGAGAAGAGATAATGAAAGCGCCGGTTGGGGTTACCGCGTCTGACGATGAATCAATGAAAGTAGCAATGCATAGCAAAGTTACCAGTGTGATACCGGATAAAAAAATGCAGGACTTATTGAAAGATCCCGCCAATGAAGGAGCTGCGCACTTAGCGAATATTTTAAAAGGAAGAGGTGAAGCTATGAAAGTTATACACGATGAAATGAAAATCGAAAAAGATAAGGAATTTTTGGCTGTGGGCAGTTTTAAGAAAAGTCACGAACAGGCAGCCGACATGTTAAGTTCCGCAACACATTTTGGTGGACAGCATCCGTCTCCTGTTCTCTTGGATATGGTGAACGATCGAATTGAGAAACTTCCTAAATCGAGTGCATCTGATATGGCTAAAAAACATATGAAAGATACATCAGACATCGTTGCATCGTATATTGCCGGTAGAGCTACTGATGAATGTGGCTTGGATGCTAAAGCTTTGGCTGCAATTGACAGCAAGGGATCAAGCACGGAAGAGTTTAAAAAGAAAACACAATCTACAGCACAAGTTAATGACGCAGCCGCAACTAGTGACCGTAACTCCTCGAACCTGAATAAAACACCATCACGTTATGACGCTAATGTTAGCAGTAGAATAGGATCGGAGACAGATGAAGAAAAGAGGAAGCGAGAAGAGATCGAAGCTAAGAAACGAGCTGAGCAAAGTACAGATTTAGATCGTGAACGGCAGCAGGCGTTGTCAATACTTCATACGCAGCTTAAAGCTCAAGGTGCTAACACGTTCTATAAACAGCCGCAAACCGAGTTGACCCACCAACAAGCTTCAGCATGGATAGACATGAAGCCTCCGATGAAAGTAGACAAGACAGTTAAAGAATCCGCCGATACGGCACGACTCCATAAGAAATTTGAAAGGAAACTGTCCGTTCTAGTTAGTAAGGTCACACCTCCTAACATGAACGACGCGATGCAAGATGTAGTAATAGAATCTGCACGAATACTATCTGAATATTTCGTATCAAGCAATTACAAAGCGCTCGTTCGAGAGGCACTAATATCGGAAATGCAGAAACGTGGCAATGAAATTCTTATTAAAATGGACAGCGCTGCGGAGACTTTCTTCTTTGCTGCTCAAAGGTTAAAGAAGGCCAAAACGATGACAATTCAGGAACCACGTAACAAAGTGTCGTATTATTTGACTAAGAAATTGGAGGAAATTATTCGTTGTCGTTCTATGGCAAGAAAATTAACATCCACAATGAAAGAGCATATCAAGGATGCCTCGGATTATTTGTCAGAGTCAGTCACCACGCCTGGTAAGTACACTCTTAATTAA
Protein
MNDASKHLAKIGAEKGRALDYLVGLMKERGESPLGQMQGYLQTYSDGAKRIENAPSLTNEKVDKGTYESVRGKLTQLVTEKPSEEHKKHITGLVDDSSKFLAAPLPETESEKRRVLADLMARKGDQMLAQDGLYKITYTEGGEEIMKAPVGVTASDDESMKVAMHSKVTSVIPDKKMQDLLKDPANEGAAHLANILKGRGEAMKVIHDEMKIEKDKEFLAVGSFKKSHEQAADMLSSATHFGGQHPSPVLLDMVNDRIEKLPKSSASDMAKKHMKDTSDIVASYIAGRATDECGLDAKALAAIDSKGSSTEEFKKKTQSTAQVNDAAATSDRNSSNLNKTPSRYDANVSSRIGSETDEEKRKREEIEAKKRAEQSTDLDRERQQALSILHTQLKAQGANTFYKQPQTELTHQQASAWIDMKPPMKVDKTVKESADTARLHKKFERKLSVLVSKVTPPNMNDAMQDVVIESARILSEYFVSSNYKALVREALISEMQKRGNEILIKMDSAAETFFFAAQRLKKAKTMTIQEPRNKVSYYLTKKLEEIIRCRSMARKLTSTMKEHIKDASDYLSESVTTPGKYTLN

Summary

Pfam
PF11901   DUF3421
Interpro
IPR006616   DM9_repeat        + More
IPR024518   DUF3421       

Ontologies

GO

Topology

Length:
584
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00038
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00206
outside
1  -  584
 
 

Population Genetic Test Statistics

Pi
37.488032
Theta
34.113069
Tajima's D
-1.402066
CLR
2.110499
CSRT
0.072296385180741
Interpretation
Uncertain
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