SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02550  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002604
Annotation
farnesoic_acid_O-methyltransferase_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.653
 

Sequence

CDS
ATGGCTAATGTCATGGATGTGGCAACAGATGACAACCTTCAATACCAATTCTTCCCCGTTTCAAGTGGATCAGTTCAGTTCAAAGTCAGAGCAGCGAATGATGCCCACATCGCGCTCACGACAGGCCCGCAAGAATCGGATCCTATGTATGAGGTGATGATTGGAGGCTGGGGAAACGCTAAGAGCGTCATCAGGAAAAATAGAACCAAGCCCGATAAGGTTGAAATTGAAAGCCCCGGAATTCTTAACGGAGGGGAATATCGTGGTTTTTGGGTTCGTTGGGATAGCGGCATTATCTCCGCTGGACGCGAGGGTGAAGCTATTCCATTCATATCTTGGTCTGATCCCGAACCTTTCCCAGTTTACTACGTCGGAGTCTGCACAGGCTGGGGTGCCACAGGCTCCTGGAAAATCGAAGTGCCACCGACTGCACCTGTAGCAGCTGCATTGTACGCAGCCCCCCCTGGCTACCCTGGAGGCTACGGAGGAAACGTACCCCCTCCGTCTGGAGGAGCCGGTATATGGGTTGATGTTTCAGGAGGTCAAGTACCTCCTGGCGCCGTTGTGGGAGGACAGGACTGCTCAGGAGAACCTCTGTATGTGGCTCGTGCTGTTCACGAAGGTGCCACGATCCCTGGTAAACTCGTTCCTTCTCATGGTTGCGCTTACGTTCCATGGGGTGGTATTGAACATGGAAAGCCTCAATACCAGATCTTAGTAGGCGGCCCAAACAACTGGGTTCCTACCAGTGGATCCAACGTCCCGCCAGGTGCATTCCCCGGTGGAGAAACTGAAGATGGAGAACCTTTATACATTGGCCGTGTCCGCCACGAAGGTAGCCTCACCACCGGCAAGGTTCAACAGTCTCACGGCGTCTGCTACATTTCGTTTGGTGGACAGGAGCTTGGATTCCCGGACTACGAAGTCCTCATGCCCTAA
Protein
MANVMDVATDDNLQYQFFPVSSGSVQFKVRAANDAHIALTTGPQESDPMYEVMIGGWGNAKSVIRKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAGREGEAIPFISWSDPEPFPVYYVGVCTGWGATGSWKIEVPPTAPVAAALYAAPPGYPGGYGGNVPPPSGGAGIWVDVSGGQVPPGAVVGGQDCSGEPLYVARAVHEGATIPGKLVPSHGCAYVPWGGIEHGKPQYQILVGGPNNWVPTSGSNVPPGAFPGGETEDGEPLYIGRVRHEGSLTTGKVQQSHGVCYISFGGQELGFPDYEVLMP

Summary

Similarity
Belongs to the mitochondrial carrier (TC 2.A.29) family.
EMBL
JQ653038    AFR54361.1    BABH01014331    ODYU01009449    SOQ53890.1    GAPW01002934    + More
JAC10664.1    HQ634704    HQ851391    ADV17352.1    AEV89769.1    JTDY01000557    KOB76683.1    DQ440333    CH477429    ABF18366.1    EAT41104.1    DS231880    EDS42553.1    KQ461103    KPJ09373.1    JXUM01010369    JXUM01010370    JXUM01010371    JXUM01010372    KQ560305    KXJ83142.1    GFDL01007364    JAV27681.1    NEVH01007828    PNF35082.1    GBYB01009669    JAG79436.1    GANO01004970    JAB54901.1    AGBW02008034    OWR54240.1    KQ459589    KPI97583.1    AK404839    BAM20323.1    AXCM01007254    LT716991    SIW59360.1    GDQN01004350    JAT86704.1    AAAB01008980    EAA14604.4    GGFJ01007980    MBW57121.1    APCN01005735    KQ971321    EFA00610.1    GGFM01000464    MBW21215.1    ATLV01014417    KE524970    KFB38714.1    GGFJ01007935    MBW57076.1    KQ414667    KOC64700.1    KJ716969    AIE12450.1    GGFK01002399    MBW35720.1    GGFJ01007979    MBW57120.1    GAMD01003340    JAA98250.1    ADMH02000447    ETN66445.1    GGFL01000620    MBW64798.1    KZ288194    PBC33903.1    JR037234    AEY57651.1    GGFL01000562    MBW64740.1    GGFK01001813    MBW35134.1    AXCN02000749    JRES01000319    KNC32324.1    CVRI01000054    CRL00421.1    GFDF01002562    JAV11522.1    NNAY01001291    OXU24466.1    EZ424306    ADD20582.1    FJ028722    ACL26692.1    EZ424307    ADD20583.1    GAKP01003568    JAC55384.1    KB632353    ERL93329.1    GDAI01002088    JAI15515.1    GDHF01030756    JAI21558.1    LJIG01009418    KRT83120.1    CCAG010005747    GGFM01000478    MBW21229.1    BT126452    AEE61416.1    CP012524    ALC40662.1    CH940648    EDW61250.1    GBXI01013200    JAD01092.1    GGFJ01008351    MBW57492.1    KA645065    AFP59694.1    CM000158    EDW91305.1    CH964282    EDW85813.1    CM002911    KMY95431.1    CH933808    EDW09712.1    CH954179    EDV55400.1    AY122199    AAM52711.1    AE013599    AAF46666.1    CH480824    EDW56566.1    CH916367    EDW01418.1    GEDC01027305    JAS09993.1    CH902619    EDV36487.1    MG876767    AXB38857.1    GAMC01010404    JAB96151.1    KK852448    KDR23720.1    DS235140    EEB12456.1    CM000071    EAL26493.1    PNF35080.1    OUUW01000001    SPP74862.1   
Pfam
PF11901   DUF3421        + More
PF12248   Methyltransf_FA
PF00153   Mito_carr
PF05253   zf-U11-48K
Interpro
IPR022041   Methyltransf_FA        + More
IPR006616   DM9_repeat       
IPR024518   DUF3421       
IPR018108   Mitochondrial_sb/sol_carrier       
IPR023395   Mt_carrier_dom_sf       
IPR002030   Mit_uncoupling_UCP-like       
IPR022776   TRM13/UPF0224_CHHC_Znf_dom       
SUPFAM
SSF103506   SSF103506       
Gene 3D
PDB
5MH1     E-value=1.37897e-09,     Score=149

Ontologies

Topology

Length:
312
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00695999999999999
Exp number, first 60 AAs:
0.000990000000000001
Total prob of N-in:
0.04784
outside
1  -  312
 
 

Population Genetic Test Statistics

Pi
198.785287
Theta
19.031927
Tajima's D
1.45321
CLR
0.258568
CSRT
0.781860906954652
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 FIPIIQHNVIK 96.77 3e-15
26280517 AAHAAGAGGGAGVNVR 96.77 3e-15
25044914 AANAVTPTVEIR 96.77 3e-15
27102218 IEDGAEFDTPDRIEYK 96.77 3e-15
28467696 AANAVTPTVEIR 96.77 3e-15
26280517 ANTAIGNIIINIR 96.30 3e-13
25044914 ANVIDIGTGTGIISIMAAK 96.30 3e-13
27102218 AANDAHIAITTGPQESDPMYEVMIGGWGNAK 96.30 3e-13
28556443 WDSGIISAGR 100.00 2e-07
28556443 VEIESPGILNGGEYR 100.00 0.001
28556443 VEIESPGILNGGEYR 100.00 0.001
28556443 FLIEWR 100.00 0.001
28556443 IEDGAEFDTPDR 100.00 0.001
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