Silkworm Genome Informatics Database

Gene

KWMTBOMO02542 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002689

Annotation

seroin_1_precursor_[Bombyx_mori]

Location

Bomo_Chr5(-):5298425-5303472 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.288 Extracellular Reliability : 1.304

CDS

ATGGCGTTTACGAAGTTTCTTTTTGTGATTACATTAATTACAATCGCGAGCGCTGGCTTTGTATGGGAGGACGATGACGATTTGTTCCCGGGATTTTCAGATGCGTTCAAGATGCCAGAGATGCCAGAGATAAAGTCTCTTGAATTTGATGATATTAAAACTCACGTCGCGGGAGATAACGAGCAATATACCGGAGAGTCTAAGTCGAGTTACAGTTCCTCATCCACGGTCAACGGCAAGACAGTGAGCAGCGGCGGAGTTAGCGAGTTGACAAATGACGGAAAAGCCGTCGAAGAAAAGGTCATGGAATACAAAGATGGCGATTAA

Protein

MAFTKFLFVITLITIASAGFVWEDDDDLFPGFSDAFKMPEMPEIKSLEFDDIKTHVAGDNEQYTGESKSSYSSSSTVNGKTVSSGGVSELTNDGKAVEEKVMEYKDGD

Uniprot

Q8T7L8 A0A3G1T159 A0A0M4U4B0 A0A0M4UT87 A0A3G1T157 Q8T7L7 + More
A0A023PMU1 A0A3G1T152 A0A3G1T155

Pubmed

11881808 24730650

EMBL

AF352584 AAL83945.1 MG604952 AXY94631.1 LC001874 BAS31061.1 + More
LC001872 BAS31059.1 MG604957 AXY94636.1 AF352585 AAL83946.1 KJ439233 AHX25884.1 MG604939 AXY94618.1 MG604940 AXY94619.1

PRIDE

Q8T7L7

ProteinModelPortal

Q8T7L8 A0A3G1T159 A0A0M4U4B0 A0A0M4UT87 A0A3G1T157 Q8T7L7 + More
A0A023PMU1 A0A3G1T152 A0A3G1T155

KEGG

692598 no KO assigned | (RefSeq) seroin 1

GO

SignalP

Position: 1 - 18, Likelihood: 0.966913

Length:

108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

11.86825

Exp number, first 60 AAs:

11.86825

Total prob of N-in:

0.65617

POSSIBLE N-term signal

sequence

outside

1 - 108

Pi

242.493625

Theta

187.083835

Tajima's D

1.285944

CLR

0

CSRT

0.735763211839408

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
27102218	AVEEKVMEYKDGD	96.00	1e-10
26822097	THVAGDNEQYTGESK	95.24	4e-09
25860555	YNAASSESSYINKDNDSISAGAHR	95.24	4e-09
26280517	SGQCATNYEQTK	95.24	4e-09
24093152	SIEFDDIK	95.24	4e-09
27102218	TVSSGGVSEITNDGK	95.24	4e-09
28467696	SIEFDDIK	95.24	4e-09
26822097	SIEFDDIK	100.00	0.001
25860555	CISDHIAAISK	100.00	0.001
26280517	TGHGGHCIECSDNRDGPNCER	100.00	0.001
24093152	THPPKPEVGQR	100.00	0.001
27102218	TVSSGGVSEITNDGKAVEEK	100.00	0.001
28467696	THPPKPEVGQRI	100.00	0.001
25860555	FINIDNKDQIKK	100.00	0.015
27102218	SIEFDDIK	100.00	0.015

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics