Silkworm Genome Informatics Database

Gene

KWMTBOMO02540 Validated by peptides from experiments

Annotation

PREDICTED:_seroin-like_[Bombyx_mori]

Location

Bomo_Chr5(-):5286034-5289992 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.986

CDS

ATGGCGTTCACGAAGTTTCTTTTTATGTTGTCATTAATCACCATCGCGAGCGCTGGCTTTGTTTGGCAGGACGATAACTTCCCGGGATTCCCAAGCGATATGTGGCCCTCTATACAGATCCCAACGATTCCGCCATTCGATCCCAAAATTCCTAACTTTGCTTTTTCGTTCCCCTCTCCTGATAACATTAAGAAAACTAAACCACAACCCGGACAAACCTACAGCGGGGTTTACGTGAGCAGCAGTGGAGGGAAGGGAACTATGGTTGCAAACATCAATGGGGAAGTGATTGAAAAAAAGTTTGGAGAGGATTCCAAAAAATCTAAGAGCAAGTCCTAG

Protein

MAFTKFLFMLSLITIASAGFVWQDDNFPGFPSDMWPSIQIPTIPPFDPKIPNFAFSFPSPDNIKKTKPQPGQTYSGVYVSSSGGKGTMVANINGEVIEKKFGEDSKKSKSKS

Uniprot

Q8T7L7 A0A0M3VH88 A0A0M4TS00 A0A3G1T156 Q0Q006 A0A3G1T153 + More

Pubmed

11881808 16857061

EMBL

AF352585 AAL83946.1 LC001871 BAS31058.1 LC001873 BAS31060.1 + More
MG604951 AXY94630.1 DQ666525 ABG72728.1 MG604953 AXY94632.1

PRIDE

Q8T7L7

ProteinModelPortal

Q8T7L7 A0A0M3VH88 A0A0M4TS00 A0A3G1T156 Q0Q006 A0A3G1T153 + More

KEGG

105842464 no KO assigned | (RefSeq) seroin-like

GO

SignalP

Position: 1 - 18, Likelihood: 0.981780

Length:

112

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.43628

Exp number, first 60 AAs:

4.38557999999999

Total prob of N-in:

0.26662

outside

1 - 112

Pi

239.408752

Theta

165.732389

Tajima's D

1.413859

CLR

0

CSRT

0.764761761911904

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
31250652	VKRTHICFHCLNRWSPFQAFAAFEDKTLSPEEEEKRHLAKCKMLGNIKFIGELGKLEILSESILHRCIQNLLARRAAAEHQEDLECLAQLVRTCGRVLDSERGRGLMEQYFARIETLSQSKELAPRIRFMLR	98.53	4e-33
26822097	IQMEAGSK	100.00	1e-04
25860555	ADEPCEAGCACKPGHYR	100.00	1e-04
24093152	IPNFAFSFPSPDNIK	100.00	1e-04
27102218	FGEDSK	100.00	1e-04
28467696	IPNFAFSFPSPDNIK	100.00	1e-04
26822097	GTMVANINGEVIEK	100.00	5e-04
25860555	TIAQHMSFK	100.00	5e-04
24093152	IPNDGSIK	100.00	5e-04
27102218	NPDCIIPIK	100.00	5e-04
31250652	GTMVANINGEVIEK	100.00	5e-04
28467696	IPMQTQTPIIMVGPGTGIAPFR	100.00	5e-04
26822097	IPNFAFSFPSPDNIKK	100.00	0.001
25860555	TKNEATATIIDR	100.00	0.001
24093152	GTMVANINGEVIEK	100.00	0.001
27102218	IPNFAFSFPSPDNIK	100.00	0.001
28467696	GTIYGIIGASGCGK	100.00	0.001

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics