Silkworm Genome Informatics Database

Gene

KWMTBOMO02535 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002596

Annotation

PREDICTED:_uncharacterized_protein_LOC101741984_[Bombyx_mori]

Location

Bomo_Chr5(+):5020662-5040976 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.105 Nuclear Reliability : 1.309

CDS

ATGTCAAATCGAGCATGGGTAACTCTGGCCACAAACGACTCCTACGGCTTGGGAGCTCTGGTGCTGGCCCATTCGCTCCGCCGCGCCGGTTCGGTGTACCCTGCCGTAGCACTCATCACACCTACCGTCAGTGAAGCTATGAGGGATCGTCTTCGCGCAGTTTTCTCCGAAGTAGTCACGGTAGACGTTCTGGACTCAAGAGACGCGGCTCACCTGGCCCTCCTCCAGCGGCCAGAGCTCGGCATCACCTTCACAAAGATCCACTGCTGGAACCTCACTCAGTACGAGAAATGCGTATTCCTAGATGCCGATATATTGGTGATCCAAAATTGCGATGAACTCTTCGAGCGTGAAGAGCTATCGGCTGCTCCCGACGTGGGATGGCCCGACTGTTTCAACTCCGGCGTTTTTGTCTTCAAACCTTCAAACGAAACCTTCGAGAAACTGATACAATTCGCGCAGCAGCGAGGCAGTTTTGATGGTGGTGATCAAGGGCTACTGAACTCTTTCTTCTCTGACTGGGCGCACGGCGACATCAACAAGCATCTTCCCTTCCTATACAATGTTACAACTGCGGCTTTCTACTCATATTTACCAGCTTTGAAACATTACGGACAGAATTTGAAAATCATTCACTTCATTGGCGCCGGTAAGCCTTGGCTTCAGCGCTTCAACTGGGAGTCCCGGTCGGTCGATGCCCCGGGGTATCTCCAGGAGTTCCTTCAACTCTGGTGGGACCTTTTCGTATCACAGGTCCACGCCCAACTCGACCATTCCATGAGTGGCGTAGCGGGCAACTTGGCCAGAGTTGTATTGGGATCGGGAACTTCAACTGAAGCCATAGACGATTTAGCTCGTCGTCAAGGTTGGGAAGCCGGTAACATTGACTATATGGGAGCTGATTCTTTTGACAATATCTGGGCAAAAATTTCTCAAACTTTAAGCCAACCCCGAACTTCGCCTCCTAAACAATTGTCGCCTCCTAAGGAAGTCTCTCCACGACAGCCAACTCCTGAACAAGTGGAATCTGAGAATGCTGAGGCAATTCCAGAAACTGTTACCGAGGCAATTCCAGAAACTGTTACCAAGTCAATTGAAGATGCAACAGTAACTGTACCTACCGAAACAACGGTTGAAGAAACTCCATCACAAATTTCCGCGACTACAAATGCTCCTGAAGTTCTGCCTGCTGTAATAGATAGTGATTCTGTCGCAGTACCTGAGCCTGCTCCGGTCACTTCTGAATCTCTAGTGGCCCCTGTTGAGGTTTTGGCCGTTCGCCCTGTAGCGATTGAATCTGAAGCAATCGCTTCGGCAGCTGTACCAACAGTAACAGAAACTCCACCATCTTCTGACAGCACACCGACTGAGACTGAACCTGTACAAAAACCTGAGACTGTACCAGCAACTGAAACTGTAACTGTAGATGCCGGTGAGACTGTACCCTTAGATGTGGCTGAATCTGCACCCGTAGCTTTAGATGAAGTTGCTCCTGAGGTGCCAAGTGAAATTAAAGCAGCAGATGTAATTGAAACTGCTTCTTTACCTGCAAGTGAATCTTCACCGATAGTTGCAAGTGAAACTGTATTAGGAATTACAAGTGAAGCTTTATCTGATGTGCCTCTCGAAATACCTGTTCCAGTAGCGGAACTCGAGCAAGTGCCACCGACTGAAGTACCAACAGTTGTAGAATCAGAAACATTGGCGAAACCAGCAGAGGAACCTAGTATTCCTCTAGTTGCGGATGAACCAGCCTCTGTAATACCAGTGCCAGTAGAGGCGTTAGCAACGGAAACCGAATTGGAAACCAAAAAAGAATCGCCCAAGAGACTGGTTGAATCAGCCAAAGAAAAGATCGAAACTATTGCAGCAGCTACCGAGCCAGCCGCTCCCGAGGTGCCTCAAACCAAAAGTGCTGTCGAAACAATTAAAGACTCAACACTTGCGGAGCCCGCATCTCCTGCTCTTGCAGCCGAAGCTCCTTCCAGTCCCGCTATTCCAGAATCTACTCCAGAGAAACCAGCGGCTGCCGGAGATAGCTCCACCGACAGCCCTCCCTTAGCCAACACACCGTCCAAAGAAGAAGCCCCCGTCGTTCCGGCCGCCAAATGCCCTAACCGAGCTTGCTCTCTAATGCGGGATGATATTGGTTGTGTAGCCGCGGAACGTCGCAAGCCGGCCGGCAAGCTGCAGCTGAGTCCGCCCGCCGCCGCCGACCCGCTCCCCACCCCCGACAGCGAGCTCGAGGACGCCGCCACGCTCGCGCACCAGATCATCGCCAGCGAGCTGCGCACGCCCACTGTCACCGCGCCCGACGCCGACCACTCCCCCACCTCGCCACCCCTGCCGACTCGTGCGGCCGGACTCGCCGTCGACGAGCCCACGGTACCCACGCCACCCGTCGGAGCGGTCTCGCTCGCTAATATCGGAGTCAAACCTACCAAGAGCAAACCTGTGGCCGAGCCGACCCCAAGCGAAGCTGCCCCTACGGAAGCACCCAAAAAAAAAGTTGTAAAGAAGGTGGTGAAGAAGGAACGCGCACCGGGCGGTGAGGCGCCCGTGCCGCCGCCCCGGAAGAAGGAGAAGAAACCCAAAGAGAATTGA

Protein

MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRDAAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSNETFEKLIQFAQQRGSFDGGDQGLLNSFFSDWAHGDINKHLPFLYNVTTAAFYSYLPALKHYGQNLKIIHFIGAGKPWLQRFNWESRSVDAPGYLQEFLQLWWDLFVSQVHAQLDHSMSGVAGNLARVVLGSGTSTEAIDDLARRQGWEAGNIDYMGADSFDNIWAKISQTLSQPRTSPPKQLSPPKEVSPRQPTPEQVESENAEAIPETVTEAIPETVTKSIEDATVTVPTETTVEETPSQISATTNAPEVLPAVIDSDSVAVPEPAPVTSESLVAPVEVLAVRPVAIESEAIASAAVPTVTETPPSSDSTPTETEPVQKPETVPATETVTVDAGETVPLDVAESAPVALDEVAPEVPSEIKAADVIETASLPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQVPPTEVPTVVESETLAKPAEEPSIPLVADEPASVIPVPVEALATETELETKKESPKRLVESAKEKIETIAAATEPAAPEVPQTKSAVETIKDSTLAEPASPALAAEAPSSPAIPESTPEKPAAAGDSSTDSPPLANTPSKEEAPVVPAAKCPNRACSLMRDDIGCVAAERRKPAGKLQLSPPAAADPLPTPDSELEDAATLAHQIIASELRTPTVTAPDADHSPTSPPLPTRAAGLAVDEPTVPTPPVGAVSLANIGVKPTKSKPVAEPTPSEAAPTEAPKKKVVKKVVKKERAPGGEAPVPPPRKKEKKPKEN

Uniprot

NA

ProteinModelPortal

NA

PDB

1LL3 E-value=7.09004e-96, Score=898

KEGG

101741984 K00750 glycogenin [EC:2.4.1.186] | (RefSeq) uncharacterized LOC101741984

PATHWAY

00500 Starch and sucrose metabolism - Bombyx mori (domestic silkworm)
01100 Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016757 GO:0008270 GO:0035023 GO:0005085 GO:0016776 GO:0006172 GO:0006631 GO:0006635 GO:0006281 GO:0048384

Length:

867

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.54218

Exp number, first 60 AAs:

0.38227

Total prob of N-in:

0.02510

outside

1 - 867

Pi

229.147202

Theta

188.454428

Tajima's D

0.492073

CLR

0.391239

CSRT

0.504974751262437

Interpretation

Uncertain

Source	Sequence	Identity	Evalue
28467696	RQGEIHDMMQR	100.00	4e-12
28467696	QGVIDHRPEIKPK	100.00	3e-11
28467696	TPTSTGGATGQAAWR	95.24	2e-06
28556443	QATVFLNR	100.00	4e-04

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics