SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02534
Pre Gene Modal
BGIBMGA002691
Annotation
PREDICTED:_uncharacterized_protein_LOC101739757_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.071
 

Sequence

CDS
ATGGAAGTTGTAAATCCTGCTGAGAAGGAGGCGAGCGAAGTGTTGCATTCCCTTCTTTCGGTGGAGAGGCGTAGTGTGGATAGCAAAGAGTCGATCATAGTCTCGATACCGTCCGACCAAAACGGCGGAGGTGAATACGGGGAGAACGCTCAGTGGCACACACCAGTCATGGGACAACATTCAGTTTTTGAAATGGGAGCCCCACAAAATATTCAACAGCATACCTATAATGGACATCAAGAACAGGTTCTCTGGCAAGGGCACACTATTCAGGTGGAGAATGGTAATCCAAATTTAACAAACATGCAAGGGCAGTATACTATAGAGTTTGAACCTCAAGTGGATGGTGAGTCCGGAGAATTAGATGTGGATACAAAACCAAAGGTAGAGAAGAAAACGGTTCTTAAAAAAAGAAAAAAAGCTGATTCTGACAGTGACGAGGAGGTGTTGGACAATAAATTGGAAGACAATCCTACACAGGTCAAAGAGAGACTGAGAAGAGGCTGCGACTGTAAAGATAACTGCTATCGAGGGCTTAATCCTGAGGCAGTATATCGTCACCGCCTCAACATAGCTGAACTCACAAAAAGCGAACACGACATGTACTTGATGGGCATCACAATGGCTAGCTTAGCAAATCCAGCAGAGACTTCCCGGCACAAAGTAAGAAGGAGATTAAGAGCCTGCTACGTATATCAAGGTAGAAAAGTTTGTTTGGAAGCATTCTTATATCTTGAAAATGTGACACACTATCAGTTAAAACGTATCCGGCAACATGTGATGACCCATGGTGTTGCACCTAGGATACATGGAAATGTTGGTAAGAAGCCCTATAACACTTTCACTTTAGACATATACAAACATGCAACGAATTTCCTTAAGGAATATTTGAAGCAACATGCAAATTCTCCTAAAGATGTTCAGCCTTCAGGAGAAGGTAAGAAAGGCAGCAAAACCATTATTATCCAAGGAGACTCTCGAAAGCACTTGTTCGAGGCTTATAAGGAGTATGGAGAAATCTTAGAACCAGGTGTTAAATTAATGGGTTATTCAACCTTCCGAGCGTTTATGAAAGACCAGTTTCCACATGTTAAATTCGCCACCAAAAAACAAGAAATACCAAAGGATATGATTCCGTTTCGAAGTGGCAAATGCATGTCTTATGATAAAAACAAAGACCCTGTCAGGATGCAGCAAGAGAAAGAAAAGGCCGAGGCGAAGAAGGCAGCTATGGAGGCCAAGAAGAAAGAGGAGCACGATAGAGAACATGCTCAACAACAAGCCCAACAACAGCAACAGAAACAACAGCAAGTGCAGCAGCAGCAGCAGCAGCAACAACAACAAGTCCAGCAGGTGCAGGTACAGCAACACCAACAGATGTCGAATCAACCGCACGTCGTCATACACCAGCAGCAGCCGCAACAACAGCAGCAGATGCAGCAACAGATGCTTGTGCCCCAAGTGAGCCAGCACCAGCAGGTGCTCACACAGCAGGTGGGCGGGGTGCAGCAGGTCTCACAGCAGCACTGCGTGCAGTCGCTCGGAGTGTCGGAGGAGGGCGGCCAGCAGGTGGAGATGGCTCAGCAGGTAATACCGCTCGCCGTGGTGCAGCAGCCGCAGGCCTACATCGTGACGCCGGTCTCGCACTTCCAGACCCGCGTGCAGGACGCGTGGTACAGACATTGA
Protein
MEVVNPAEKEASEVLHSLLSVERRSVDSKESIIVSIPSDQNGGGEYGENAQWHTPVMGQHSVFEMGAPQNIQQHTYNGHQEQVLWQGHTIQVENGNPNLTNMQGQYTIEFEPQVDGESGELDVDTKPKVEKKTVLKKRKKADSDSDEEVLDNKLEDNPTQVKERLRRGCDCKDNCYRGLNPEAVYRHRLNIAELTKSEHDMYLMGITMASLANPAETSRHKVRRRLRACYVYQGRKVCLEAFLYLENVTHYQLKRIRQHVMTHGVAPRIHGNVGKKPYNTFTLDIYKHATNFLKEYLKQHANSPKDVQPSGEGKKGSKTIIIQGDSRKHLFEAYKEYGEILEPGVKLMGYSTFRAFMKDQFPHVKFATKKQEIPKDMIPFRSGKCMSYDKNKDPVRMQQEKEKAEAKKAAMEAKKKEEHDREHAQQQAQQQQQKQQQVQQQQQQQQQQVQQVQVQQHQQMSNQPHVVIHQQQPQQQQQMQQQMLVPQVSQHQQVLTQQVGGVQQVSQQHCVQSLGVSEEGGQQVEMAQQVIPLAVVQQPQAYIVTPVSHFQTRVQDAWYRH

Summary

Interpro
IPR021950   Spt20        + More
IPR006939   SNF5       

Ontologies

GO

Topology

Length:
561
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00264
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00126
outside
1  -  561
 
 

Population Genetic Test Statistics

Pi
207.557853
Theta
181.262698
Tajima's D
0.38263
CLR
0.157768
CSRT
0.47677616119194
Interpretation
Uncertain
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