SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02532
Annotation
PREDICTED:_neurofilament_medium_polypeptide-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.081
 

Sequence

CDS
ATGAGCATGTCCAGCCTGAAAAAGTTATTACCCCAGGAGGGTACCTCTTGCTCTGCGGGAGGAGAATCCCTCCGTGCGGTCGAGAAATCGGCCGCACGCTGCCCCTCGTATTCTGGGGGGGGCACAAGCTGTTCCGGGAAAGAGTCCGAGAAGGACGGGGAGAAAAGGAAGAGGTCCACAAGGGACGAAAGAGAAACGGTGCAAAACGAAGACCGCAGGAGAGAAAGCAGCGTTTGCTCGGAGGACAGCATGGTGGTCAGCTCCTGCTGTTTATCACCAAAGAGAACGACGCGCAAAAGGGCAAAAGGCTCGAAGAACGCAAGCTCCGACAGCAGTACCGAATCGGAGGCGTCTAGGTCAGGATCGTTGGTGTCCAGGACCAGACCATCGAAGAGAGGCCGAGGTCGTCCTCCAACGACCGGCCAATACGTGGGATTGGCGGCGGCGAAGCAGGCATACTTAAAAGCTCAACGTGAAGAGCTGGAGCTTCGCGCTGAACAGGAGGTAGTAGAAAGCGTGCACAACCTGCGTGAGAAGAGGCGCGCAGTACATTTAATATCCGGGAACATAACAGCAGATCCCGCGACTAGGCTCCAGGAGACCGCCCAGATGGCCCTTACCATCGCGGCGAAAGCGCGCAACCCGAAGGGGACGTACATCAAAGCCCTTAAGGAGATGGCCACAACAATAAAGGAGGCCACGGAAGATCTAGCTTCCAGATCGGCCAACGAGGAAACCCTGAGGCTGCAGGCACTCAGCGAGAGACAGGAGGCGGAGATCCTGCAGCTCAGGAAGGAAGTAGAGGACGTAAGAGCGGAAATGGTGCGCCTCGCTCAGACGACAGCGCAGCCCACTCCCGCCCCAACACTGCCAAACGAAGACGACGAGCGACGCCTGCAGATAATCATGCGAGCAGTCGGGTCCATGCTGGACGCCCGACTCGCGGGTCTGGAGGCCCGTCTACTCCCAGAGCCTCGCTTGCGACCACCTTTGGCCGCTGACGCAAGAAGGAGGAGCAGAGAGAGCGAAATCGATCCAGACACTGCAGGTCTTGTGTCGGAGGCAACGCCGCCTTATGCGGCTCTGCCCCAGCTTGAGACCAACAAGAAAGTGAAGCCCAAGAAACAGAAGGGCAATAACAAGAAGACGTCGCCGTCAGCTCCACCCGAGCCGGCAGCTCCACCCGAGCCGCGCGCATTCCCTCCGGCCCCCGCTGCCCTTACGGTCAGTTGGGCGACCGTTGCGCGTAGAGGAGCACGGCCGAGAAGGGAAAAGGAGCCAGCACCGACGACCAACGCGGAAGGCCAACGAGACAGAAACCCTGCCCCGCTCAAGCCTAAGAAGAAAGGTAGAAAGAAGAGACTTCGAGCTCCGCGCTCGCAGGCCGTTATTCTGAGGCTGCACCCGGAGGCCATCGAAAAGGGGCTCTCCTACCGGGAGGTGCTCGCCGAGGCGAGGGCCAGCATCGACGCCGGAGCCTTAGGGATCCCCATCGAGAAGGTCCGGTCAGCAATAACCGGAGCCAAAATACTCATAGTGAGCGGCGAGGACCAGATCGCGAAGGCCGACTTGCTGGCCGAGAAGCTCAAGGAGGTTCTCTCTTCTAAGAGAGTAACGGTGACAAGACCGATAGTGACCGCTGCAATCCGCATAAGCGGACTTGACGATTCGCTGACGGAGGAGGAGATATGCACCGAGCTTGCGCGCATCGGCGATTGCTCCGTCGATGCAGTCAAGGCTGGCTCTATCAAGCCCGGATCCGGAGGAATGGGCCAGGTTCTCGTTCGTTGCCCGATAGCAGCGGCGAAGAAAATTGTTACAGTGACGAAGCTGCGCATCGGGTGGAGCGTTGTTCGCGTCCACCTGCTGGAGGCCCGGAGGCTACAATGCTTCCGCTGCCACGCGTTGGGCCATGTGGGTGCGCGGTGCCCGTCGTCGGTCGACCGCAGCCACGACTGCTACCGGTGCGGACAGACCGGCCACGTGGCATCCGGATGCACACTGGCACCGCGATGCGCCGTCTGCGCCTCCGCCGGGAAACCAGCGGACCACACTTCGGGGGGCAAGGCCTGTGCAAGGCCCCCGAGAAAACCGAGGAGAGAGGACGTCGCTGCACCCGCGGCCGCACCCGTTGCTGCAGACCGAAGTCAACTCGGCGAGACGACGACTCCGATGGACGTCCAGCCTCCGTCGGGCACAAGGAAGACCGGGGCTTTATGA
Protein
MSMSSLKKLLPQEGTSCSAGGESLRAVEKSAARCPSYSGGGTSCSGKESEKDGEKRKRSTRDERETVQNEDRRRESSVCSEDSMVVSSCCLSPKRTTRKRAKGSKNASSDSSTESEASRSGSLVSRTRPSKRGRGRPPTTGQYVGLAAAKQAYLKAQREELELRAEQEVVESVHNLREKRRAVHLISGNITADPATRLQETAQMALTIAAKARNPKGTYIKALKEMATTIKEATEDLASRSANEETLRLQALSERQEAEILQLRKEVEDVRAEMVRLAQTTAQPTPAPTLPNEDDERRLQIIMRAVGSMLDARLAGLEARLLPEPRLRPPLAADARRRSRESEIDPDTAGLVSEATPPYAALPQLETNKKVKPKKQKGNNKKTSPSAPPEPAAPPEPRAFPPAPAALTVSWATVARRGARPRREKEPAPTTNAEGQRDRNPAPLKPKKKGRKKRLRAPRSQAVILRLHPEAIEKGLSYREVLAEARASIDAGALGIPIEKVRSAITGAKILIVSGEDQIAKADLLAEKLKEVLSSKRVTVTRPIVTAAIRISGLDDSLTEEEICTELARIGDCSVDAVKAGSIKPGSGGMGQVLVRCPIAAAKKIVTVTKLRIGWSVVRVHLLEARRLQCFRCHALGHVGARCPSSVDRSHDCYRCGQTGHVASGCTLAPRCAVCASAGKPADHTSGGKACARPPRKPRREDVAAPAAAPVAADRSQLGETTTPMDVQPPSGTRKTGAL

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

Length:
739
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00081
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00005
outside
1  -  739
 
 

Population Genetic Test Statistics

Pi
28.338625
Theta
15.102786
Tajima's D
0.677511
CLR
144.649365
CSRT
0.584720763961802
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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