Silkworm Genome Informatics Database

Gene

KWMTBOMO02532

Annotation

PREDICTED:_neurofilament_medium_polypeptide-like_[Bombyx_mori]

Location

Bomo_Chr5(+):4936772-4939636 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.081

CDS

ATGAGCATGTCCAGCCTGAAAAAGTTATTACCCCAGGAGGGTACCTCTTGCTCTGCGGGAGGAGAATCCCTCCGTGCGGTCGAGAAATCGGCCGCACGCTGCCCCTCGTATTCTGGGGGGGGCACAAGCTGTTCCGGGAAAGAGTCCGAGAAGGACGGGGAGAAAAGGAAGAGGTCCACAAGGGACGAAAGAGAAACGGTGCAAAACGAAGACCGCAGGAGAGAAAGCAGCGTTTGCTCGGAGGACAGCATGGTGGTCAGCTCCTGCTGTTTATCACCAAAGAGAACGACGCGCAAAAGGGCAAAAGGCTCGAAGAACGCAAGCTCCGACAGCAGTACCGAATCGGAGGCGTCTAGGTCAGGATCGTTGGTGTCCAGGACCAGACCATCGAAGAGAGGCCGAGGTCGTCCTCCAACGACCGGCCAATACGTGGGATTGGCGGCGGCGAAGCAGGCATACTTAAAAGCTCAACGTGAAGAGCTGGAGCTTCGCGCTGAACAGGAGGTAGTAGAAAGCGTGCACAACCTGCGTGAGAAGAGGCGCGCAGTACATTTAATATCCGGGAACATAACAGCAGATCCCGCGACTAGGCTCCAGGAGACCGCCCAGATGGCCCTTACCATCGCGGCGAAAGCGCGCAACCCGAAGGGGACGTACATCAAAGCCCTTAAGGAGATGGCCACAACAATAAAGGAGGCCACGGAAGATCTAGCTTCCAGATCGGCCAACGAGGAAACCCTGAGGCTGCAGGCACTCAGCGAGAGACAGGAGGCGGAGATCCTGCAGCTCAGGAAGGAAGTAGAGGACGTAAGAGCGGAAATGGTGCGCCTCGCTCAGACGACAGCGCAGCCCACTCCCGCCCCAACACTGCCAAACGAAGACGACGAGCGACGCCTGCAGATAATCATGCGAGCAGTCGGGTCCATGCTGGACGCCCGACTCGCGGGTCTGGAGGCCCGTCTACTCCCAGAGCCTCGCTTGCGACCACCTTTGGCCGCTGACGCAAGAAGGAGGAGCAGAGAGAGCGAAATCGATCCAGACACTGCAGGTCTTGTGTCGGAGGCAACGCCGCCTTATGCGGCTCTGCCCCAGCTTGAGACCAACAAGAAAGTGAAGCCCAAGAAACAGAAGGGCAATAACAAGAAGACGTCGCCGTCAGCTCCACCCGAGCCGGCAGCTCCACCCGAGCCGCGCGCATTCCCTCCGGCCCCCGCTGCCCTTACGGTCAGTTGGGCGACCGTTGCGCGTAGAGGAGCACGGCCGAGAAGGGAAAAGGAGCCAGCACCGACGACCAACGCGGAAGGCCAACGAGACAGAAACCCTGCCCCGCTCAAGCCTAAGAAGAAAGGTAGAAAGAAGAGACTTCGAGCTCCGCGCTCGCAGGCCGTTATTCTGAGGCTGCACCCGGAGGCCATCGAAAAGGGGCTCTCCTACCGGGAGGTGCTCGCCGAGGCGAGGGCCAGCATCGACGCCGGAGCCTTAGGGATCCCCATCGAGAAGGTCCGGTCAGCAATAACCGGAGCCAAAATACTCATAGTGAGCGGCGAGGACCAGATCGCGAAGGCCGACTTGCTGGCCGAGAAGCTCAAGGAGGTTCTCTCTTCTAAGAGAGTAACGGTGACAAGACCGATAGTGACCGCTGCAATCCGCATAAGCGGACTTGACGATTCGCTGACGGAGGAGGAGATATGCACCGAGCTTGCGCGCATCGGCGATTGCTCCGTCGATGCAGTCAAGGCTGGCTCTATCAAGCCCGGATCCGGAGGAATGGGCCAGGTTCTCGTTCGTTGCCCGATAGCAGCGGCGAAGAAAATTGTTACAGTGACGAAGCTGCGCATCGGGTGGAGCGTTGTTCGCGTCCACCTGCTGGAGGCCCGGAGGCTACAATGCTTCCGCTGCCACGCGTTGGGCCATGTGGGTGCGCGGTGCCCGTCGTCGGTCGACCGCAGCCACGACTGCTACCGGTGCGGACAGACCGGCCACGTGGCATCCGGATGCACACTGGCACCGCGATGCGCCGTCTGCGCCTCCGCCGGGAAACCAGCGGACCACACTTCGGGGGGCAAGGCCTGTGCAAGGCCCCCGAGAAAACCGAGGAGAGAGGACGTCGCTGCACCCGCGGCCGCACCCGTTGCTGCAGACCGAAGTCAACTCGGCGAGACGACGACTCCGATGGACGTCCAGCCTCCGTCGGGCACAAGGAAGACCGGGGCTTTATGA

Protein

MSMSSLKKLLPQEGTSCSAGGESLRAVEKSAARCPSYSGGGTSCSGKESEKDGEKRKRSTRDERETVQNEDRRRESSVCSEDSMVVSSCCLSPKRTTRKRAKGSKNASSDSSTESEASRSGSLVSRTRPSKRGRGRPPTTGQYVGLAAAKQAYLKAQREELELRAEQEVVESVHNLREKRRAVHLISGNITADPATRLQETAQMALTIAAKARNPKGTYIKALKEMATTIKEATEDLASRSANEETLRLQALSERQEAEILQLRKEVEDVRAEMVRLAQTTAQPTPAPTLPNEDDERRLQIIMRAVGSMLDARLAGLEARLLPEPRLRPPLAADARRRSRESEIDPDTAGLVSEATPPYAALPQLETNKKVKPKKQKGNNKKTSPSAPPEPAAPPEPRAFPPAPAALTVSWATVARRGARPRREKEPAPTTNAEGQRDRNPAPLKPKKKGRKKRLRAPRSQAVILRLHPEAIEKGLSYREVLAEARASIDAGALGIPIEKVRSAITGAKILIVSGEDQIAKADLLAEKLKEVLSSKRVTVTRPIVTAAIRISGLDDSLTEEEICTELARIGDCSVDAVKAGSIKPGSGGMGQVLVRCPIAAAKKIVTVTKLRIGWSVVRVHLLEARRLQCFRCHALGHVGARCPSSVDRSHDCYRCGQTGHVASGCTLAPRCAVCASAGKPADHTSGGKACARPPRKPRREDVAAPAAAPVAADRSQLGETTTPMDVQPPSGTRKTGAL

Uniprot

NA

ProteinModelPortal

NA

KEGG

105842334 no KO assigned | (RefSeq) neurofilament medium polypeptide-like

GO

GO:0003676 GO:0008270 GO:0035023 GO:0005085 GO:0016776 GO:0006172 GO:0006631 GO:0006635 GO:0006281 GO:0048384

Length:

739

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00081

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00005

outside

1 - 739

Pi

28.338625

Theta

15.102786

Tajima's D

0.677511

CLR

144.649365

CSRT

0.584720763961802

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree