SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO02518
Pre Gene Modal
BGIBMGA002696
Annotation
PREDICTED:_uncharacterized_protein_LOC101740429_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.819
 

Sequence

CDS
ATGACCCCGTCTCGATACACGCCAAGACCTACGAGTACACGTGGGCGCGGTTCAGCGCATTTCTCTACGTCGAGTGGATCAGATGCACCTCTGCCGCCACCCAACCGAGGAACACCCCCAACACGCAGCCGGCCGACATTGAAACCCTCCACAGCTATTGTCTCAAAAACGACAGAGTTTGTAGACATCTACAACCATCCGCCCAGTAGACCAGCGTCTGTTTATCCTCAACCAACACCGGATAAGACAGCGGCGAAATGCAGGAAAGACGTTTGTTTGTTGCCAGACTGCTACTGCGGTGGAAAGGAAATTCCAGGAGACTTACCGGTGGAGTCGGTCCCGCAAATTGTTCTTCTGACATTTGACGATTCCGTCAACGATTTGAACAAAGGCCTGTATACTGACCTCTTTGAGAAAGGTCGTGTCAACCCGAACGGCTGTCCGATTACGGCAACATTTTATGTCTCCCACGAATGGACTGATTACAGCCAAGTTCAGAACCTCTATTCTGCTGGACACGAGATGGCCTCACACACGATTTCCCATAGCTTTGGTGAACAATTTTCTCAAAAGAAATGGAACAGAGAAGTTGCTGGCCAACGAGAAATTCTTGCAGCTTATGGTGGTGTAAAACTTGAGGATGTTAGAGGAATGAGAGCGCCGTTCCTTTCCGTTGGTGGAAACAAAATGTTCAAAATGCTGTACGATTCTAACTTCACTTACGACTCTTCTCTCCCAGTGTATGAAAACAGACCGCCCAGCTGGCCTTATACTCTCGATTATAAACTATTCCACGACTGTATGATACCACCGTGTCCGACGAAATCCTATCCAGGTGTTTGGGAGGTCCCCATGGTGATGTGGCAAGACTTGAACGGGGGCCGATGCTCCATGGGTGATGCTTGCGCTAATCCACCTGAACCCGAAAACGTTTATAAAATGATTCTGAAGAACTTCGATAGACACTATAGCACCAACAGGGCACCTTTCGGTTTATTCTATCACGCGGCTTGGTTCACTCAGCCGCACCACAAGGAAGGCTTCATTATGTTCTTGGATCACATCAACCAGATGCCGGATGTGTGGATAGTCACTAACTGGCAAGCTCTACAGTGGGTCAGGGATCCCACTCCTATCTCTAGGATAAATAATTTCCAGCCTTTCCAGTGCAACTATCAGGATCGACCGAAGAAGTGCAACAACCCCAAAGTGTGCAACCTTTGGCACAAATCCGGAGTAAGATACATGAGAACATGTCAACCCTGTCCCGAAGTGTACCCATGGACCGGCAAACAGTCGGAGAGCAAAGTTGTTGTAGTCGCTAGATCTTCGCAATGGGCGGTACATGAATTCTTATCTAGTTCATTTTCAAGAGGATTTATCAATTTAGTAGTCATCGGACAGAGTTTCAAAGAAGACGATGATTCAACTATAGAATCACCGTATATATTATACACTCATAAATTATACACGGACGGATTGGGTGCAAGTAAGCCTGTCGTTCTCAATTCTTGGTCTCATGGAAAGTTTTCGAGGAATGTAAATTTGTTTCCACCAAAAATGACAGGAGGGTATGCGGGACATAGAGTCGTCGTAGCTGCAGCCAATCAACCACCTTTCGTTTTTAGAAGGTAA
Protein
MTPSRYTPRPTSTRGRGSAHFSTSSGSDAPLPPPNRGTPPTRSRPTLKPSTAIVSKTTEFVDIYNHPPSRPASVYPQPTPDKTAAKCRKDVCLLPDCYCGGKEIPGDLPVESVPQIVLLTFDDSVNDLNKGLYTDLFEKGRVNPNGCPITATFYVSHEWTDYSQVQNLYSAGHEMASHTISHSFGEQFSQKKWNREVAGQREILAAYGGVKLEDVRGMRAPFLSVGGNKMFKMLYDSNFTYDSSLPVYENRPPSWPYTLDYKLFHDCMIPPCPTKSYPGVWEVPMVMWQDLNGGRCSMGDACANPPEPENVYKMILKNFDRHYSTNRAPFGLFYHAAWFTQPHHKEGFIMFLDHINQMPDVWIVTNWQALQWVRDPTPISRINNFQPFQCNYQDRPKKCNNPKVCNLWHKSGVRYMRTCQPCPEVYPWTGKQSESKVVVVARSSQWAVHEFLSSSFSRGFINLVVIGQSFKEDDDSTIESPYILYTHKLYTDGLGASKPVVLNSWSHGKFSRNVNLFPPKMTGGYAGHRVVVAAANQPPFVFRR

Summary

EMBL
BABH01014405    ODYU01008372    SOQ51907.1    AGBW02009170    OWR51476.1    AK405096    + More
BAM20495.1    GDHF01030961    JAI21353.1    GAKP01015114    GAKP01015110    JAC43842.1    CH940661    EDW71173.2    CH902620    EDV30812.2    KPU73050.1    KPU73051.1    GBXI01003578    JAD10714.1    KPU73048.1    CH964182    KRF99254.1    CM002910    KMY87198.1    KMY87199.1    KMY87204.1    KMY87213.1    CH954177    EDV57170.2    ADMH02001646    ETN61615.1    KMY87216.1    OUUW01000004    SPP79212.1    KMY87207.1    KMY87214.1    CH478013    EAT34386.1    CH933807    KRG02465.1    CH379059    EAL34164.2    AE014134    AAF51568.3    GDHF01029609    JAI22705.1    CH479187    EDW39947.1    KMY87200.1    GAMC01009606    JAB96949.1    AFH03485.1    KRT03700.1    ATLV01014763    KE524984    KFB39564.1    KMY87206.1    KMY87215.1    KRT03699.1    CM000157    EDW87079.2    ABV53594.2    AFH03483.1    AAAB01008964    APCN01000747    KPU73052.1    KMY87203.1    KMY87202.1    EAA12207.4    KMY87205.1    KMY87212.1    DS232932    EDS26869.1    KMY87211.1    AFH03482.1    NEVH01021927    PNF19315.1    PNF19316.1    KQS69892.1    GDHF01018544    JAI33770.1    AXCN02000644    GGFL01005111    MBW69289.1    GGFM01006436    MBW27187.1    KPU73053.1    GGFM01005972    MBW26723.1    GGFL01005081    MBW69259.1    CH480829    EDW45335.1    GBXI01008775    JAD05517.1    GGFK01006485    MBW39806.1    GGFK01006500    MBW39821.1    KMY87209.1    GBRD01013047    GBRD01013045    JAG52781.1    GBHO01014645    JAG28959.1    BT057995    AAF51567.2    ACM16705.1    GFDF01000869    JAV13215.1    GFDF01010113    JAV03971.1    GFDF01000868    JAV13216.1    KRG02463.1    KRT03703.1    KRT03702.1    KQ971307    EFA13323.2    EU190488    ABW74148.1    PNF19314.1    KQS69890.1    KMY87210.1    JRES01001684    KNC20966.1    KRT03701.1    AFH03484.1   
Pfam
PF01522   Polysacc_deac_1        + More
PF01607   CBM_14
Interpro
IPR011330   Glyco_hydro/deAcase_b/a-brl        + More
IPR002509   NODB_dom       
IPR002557   Chitin-bd_dom       
IPR036508   Chitin-bd_dom_sf       
SUPFAM
SSF88713   SSF88713        + More
SSF57625   SSF57625       
PDB
5Z34     E-value=1.10296e-71,     Score=688

Ontologies

Topology

Length:
544
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01891
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00290
outside
1  -  544
 
 

Population Genetic Test Statistics

Pi
185.782432
Theta
168.948854
Tajima's D
0.185486
CLR
130.998746
CSRT
0.424078796060197
Interpretation
Uncertain
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