Gene

KWMTBOMO02517

Pre Gene Modal

BGIBMGA002697

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740564_[Bombyx_mori]

Location

Bomo_Chr5(-):4597249-4599201      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.153 PlasmaMembrane   Reliability : 1.477

CDS

ATGTTCCCGGAGACTGTTGATACTATTCACCAATTACTAGCGGGTTTTTACAGAGTGGGGACTTTAGATCGGGGTGGCTGGGAAAGATGGTTCCTCAACTCATCAGATCCTAATACAAATAAGCTCTTGAAGAAATTGGAGTTAGTACCCAATGTCGAGGCTGGAATCATGAACACGACCAAAGCATTCTTTTGGCCGTACGCCTTTTTGGGATCAAAAGCTGAACTCGAATATATTGTGCAATCTAATTTTACGAAAACCACATCAAAAAGAGCCGTCCTTCACATTTCTAATGAATGTTTTGTACCATTTGGAGTTACTATTGGATTTCCAAATAATTCCTTGTATACAGCCAAACTGAATAATGACCTAAGAAGGATGGTACAAAGTGGCATAGTAGATAAAATAGTAGACGAAGTCCGTTGGGAAATGCAAAGAAGCAGTAATGGGAAATTACTTTCTGCAGTTGGAGGTTCTTTGAAAGTATCTGCAGCTGAGGAGAAAGGATTGACCTTAGAAGACACTCAAGGCATGTTCTTACTATTAGCAGCAGGCTTCCTCATAGCAGCAACGGCACTTATATCCGAATGGATTGGCGGATTCTCTAAGCTATGTAGATTCAGAAAGAAGAAAAACACGCTTGTAAATTCTAGTACCAAAGAAGATTCAATAAATATGCCACCAACTGACAGCAAAGATTTTAAAACAGAGACAGAAAGTGTTCTCCATTTTTGTTCAAGATCTACTAGCCCTGGTTCTAATGAATCCTTAGACGGACAAATTATAAATGTAACAGAAGAAAGTATAGAAATTCATAAGCAATTTACCTCTGAATGGGATTCTAGAAGATCTAGTTCAGTCGATTTGGAGAAAGAAGTGAAGGAAATATTCGAAAGAGATCTGAGGAGACGTGGTGCTGCTTTAAATAATTGTCAGGATGTTGTTCTTGAAACTCGGCAAAGTACTGCGTCGAATAATGCTTTTGGGGATGCTGTTAAATAA

Protein

MFPETVDTIHQLLAGFYRVGTLDRGGWERWFLNSSDPNTNKLLKKLELVPNVEAGIMNTTKAFFWPYAFLGSKAELEYIVQSNFTKTTSKRAVLHISNECFVPFGVTIGFPNNSLYTAKLNNDLRRMVQSGIVDKIVDEVRWEMQRSSNGKLLSAVGGSLKVSAAEEKGLTLEDTQGMFLLLAAGFLIAATALISEWIGGFSKLCRFRKKKNTLVNSSTKEDSINMPPTDSKDFKTETESVLHFCSRSTSPGSNESLDGQIINVTEESIEIHKQFTSEWDSRRSSSVDLEKEVKEIFERDLRRRGAALNNCQDVVLETRQSTASNNAFGDAVK

Uniprot

H9IZL2   A0A1X9PB64   A0A0U3A902   A0A2A4IZD0   A0A0F7QJZ9   A0A146JVR3   + More
A0A2A4IXT8   A0A2H1WG37   A0A0S1TP41   A0A1B3P5H7   E5FIA3   A0A076E9D9   A0A2K8GL78   A0A1B3B700   A0A0L7LV99   A0A076E9D4   A0A140G9G7   A0A0B5A1P9   A0A0K8TUY2   A0A2K8GKX6   A0A345BF13   A0A223HCX2   H9A5S1   A0A223HD93   A0A212FCJ9   A0A194QWR3   A0A194PEL7   A0A1I8MGI9   A0A182IZF1   A0A0L0BM20   B4M1T5  

Pubmed

19121390    26657286    25803580    26812239    27538507    21091811    + More
24998398    29375398    26227816    27004525    26017144    28736530    29727827    28150741    22363688    27006164    22118469    26354079    25315136    26108605    17994087   

EMBL

BABH01014405    BABH01014406    BABH01014407    KX084514    ARO76469.1    KP975104    + More
ALT31623.1    NWSH01004680    PCG64778.1    LC017783    BAR64797.1    GEDO01000006    JAP88620.1    PCG64777.1    ODYU01008372    SOQ51906.1    KR912019    ALM24946.1    KX655902    AOG12851.1    HM562967    ADR64678.1    KF487725    AII01123.1    KY225529    ARO70541.1    KT588078    AOE47988.1    JTDY01000020    KOB79387.1    KF487715    AII01113.1    KU702619    AMM70646.1    KJ542743    AJD81627.1    GCVX01000132    JAI18098.1    KX585394    ARO70287.1    MG820666    AXF48837.1    KY283567    AST36227.1    JN836721    AFC91761.2    KY283698    AST36357.1    AGBW02009170    OWR51475.1    KQ461103    KPJ09400.1    KQ459606    KPI91801.1    JRES01001684    KNC20973.1    CH940651    EDW65639.2   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053240    UP000053268    + More
UP000095301    UP000075880    UP000037069    UP000008792   

PRIDE

H9IZL2   

Pfam

PF00060   Lig_chan        + More
PF00497   SBP_bac_3
PF10613   Lig_chan-Glu_bd

Interpro

IPR001320   Iontro_rcpt        + More
IPR001638   Solute-binding_3/MltF_N       
IPR019594   Glu/Gly-bd       

ProteinModelPortal

H9IZL2   A0A1X9PB64   A0A0U3A902   A0A2A4IZD0   A0A0F7QJZ9   A0A146JVR3   + More
A0A2A4IXT8   A0A2H1WG37   A0A0S1TP41   A0A1B3P5H7   E5FIA3   A0A076E9D9   A0A2K8GL78   A0A1B3B700   A0A0L7LV99   A0A076E9D4   A0A140G9G7   A0A0B5A1P9   A0A0K8TUY2   A0A2K8GKX6   A0A345BF13   A0A223HCX2   H9A5S1   A0A223HD93   A0A212FCJ9   A0A194QWR3   A0A194PEL7   A0A1I8MGI9   A0A182IZF1   A0A0L0BM20   B4M1T5  

KEGG

101740564    no KO assigned | (RefSeq) uncharacterized LOC101740564

GO

GO:0016021   GO:0004970   GO:0005886  

Length:

333

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

27.34151

Exp number, first 60 AAs:

0.15517

Total prob of N-in:

0.29096

outside

1  -  178

TMhelix

179  -  201

inside

202  -  333

 

 

Pi

190.998802

Theta

174.919383

Tajima's D

0.193238

CLR

0.038123

CSRT

0.424378781060947

Interpretation

Uncertain